Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1969 ATGCCGGGAATGGCTACAAATGGAGTTAATGAGGAGGGGGAAGCAAATGCAAATGAAAGGAGTATGAACGCGTCCACCTCTAAGGAAACCTCAGCAACTAGTAAGCCGGAAAACCCCGGGACTGCAGATCCTGATTCTCGTGTTGAAGGGGCGGTTGACACCTCAATTGAGCAGCTATATGAGAATGTGTGTGACATGCAAAGTTCTGATCAGTCAATCTCAAGGCGAAGTTATGGATCTGACGGTGAGGAGTCTCGGATTGATTCAGAATTGCACCATCTTGTTGGAGGACAGATGAGGGAGGTGGAGATAATGGAAGAGGAAACGAAGGAAAAGCAAGGAGAAGGTTACGGTAGTGAAACATCAAATGATTACAAGTTGGAACATGTGGATGTGACTCAGCCCGCAAGGACGAGTTCTGCCTCTTCGGGAAAATCAAGCAAAGCATCCAATACAAAGTTGCAACCTAAAAAATTGCCAAAAACAAGACCAAAAACCAAAAGTCTTCCTGCAAAGCCTCCTGCTCCTGTTGAGAGAAAGAACGATAACAGGCCTTTGAGGAAACAAACCACAGCCACAGTGGTTAATAGTGTGAAGAAAGCGCAAACGCCTCCTTCTAAAAGGCCAGTGCTGCCAAATCGTGCCAAGAATCCAATTGAGCCAACATCAGATAAGCCAGAGACGGGACCAACTTTACTTAAGCAGGCAATGGATCTGATGTCATCAGGGGATAATCAGCAGACGGCTCTTGAACTAGCCCATCAAGCAAAGAAAGTGTTTGAGAAGTCTGCCCATGAGAAACCAAGTTTGGAGCTTGTTATGTGTTTACATGTTACAGCAGCAATATATAGTAGCTTGGGTCAATACAATGAAGCGATTCCAATTCTCAAGTCCTCGATTGAGATTCCCATAATTCAGGAAGGCGAAGAGCATGCCCTTGCTAAATTTTCTGGTCTAATGCAACTGGGTGACACCTATGCCATGTTGGGCCAGCTTGAGCATTCAATTATGTTCTACACAAAAGGTCTGGAAGTCCAGAGACAGGTCTTGGGAGAAACAGACCCGAGATATGGTGAAACTTGTAGGTATATTGCTGAAGTTCATGTTCAAGCATTGCAATTTGATGAGGCTGAGAGGCTCTGCGAAATGGCTCTTGACACTCATAGAACACATGATTCTTGCCCTTCCCTTGACGAGGCAGCCGATAGGAGGCTCATGGGCCTTATATGTGAAGCAAAGGGAAAGCATGAGGCAGCCCTAGAACATCTTGTTTTGGCGAGCATGGGAATGGTAGCGAATGGCCAGGAAGTGGAAGTAGCTTCTGTTGACTGCAGTATTGGAGATGCTTACTTATCCTTGTGTCAATATGATGAGGCTATTTTTGCCTATCAGAAAGCACTTACAGTTTTCGAGGCCAGCAAAGGAGAGAATCATCCGGCTGTGGGTTTGGTTTTTGTACGTCTAGCTGACTTGTTTAAGAGGACAGGGAAGATAAAGGAATCATTATCTTACTGTGAGAGTGCACTTAAAATCTATGAGAATCCTCTTCCCGGGGTCTCTCCCGAGGACATTGCAAGTGGTCTAACCGATGTTGCAGCCATCTACGAGTCAATGAACGAGCATGAACAGGCACTCAACTTATTGCAAAAGGCATTGCTGCTATATAACAATGCCCCTTATCAGCAGAACACAATAGCAGGAATTGAAGCTCAGATGGGGGTCATGTACTACATCATGGGCAATTATACTGAATCTTACAATGCTTTCAAGAGTGCTATCTCAAAGCTTCGTGCCATTGGAGAAAAGAAATCGCCCATGTTTGGGATTGTTCTTAATCAGATGGGACTTTCTTGTGTGCAGCGTTATGCACTTAGTGAGGCTGCAGAATTGTTTGAAGAAGCAAGGAGTATTTTGGAACTAGAGTATGGACCATATCACCCTGAAACACTTGGCATTTATAGCAATCTCGCCGGAACGTACGATGCAATGGGCAGGTTAGATGATGCAATTGAAACTCTAGAATACGTTGTTAGTCTAAGGGAGGAGAAACTGGGGACTGCAAATCCAGACGGATATGACGAGAAGAGACGGTTGAGTGAGTTGTTGAAGGAAGCGGGTAGGGCCCGGAACAGAAAATCTGTGTCACTTGAGCACCTTCTTGATGCCAATACTGGTGCTCTAAATAACCTCGTAATAAGGATGGCTAGCTAG 2211 0.4509 MPGMATNGVNEEGEANANERSMNASTSKETSATSKPENPGTADPDSRVEGAVDTSIEQLYENVCDMQSSDQSISRRSYGSDGEESRIDSELHHLVGGQMREVEIMEEETKEKQGEGYGSETSNDYKLEHVDVTQPARTSSASSGKSSKASNTKLQPKKLPKTRPKTKSLPAKPPAPVERKNDNRPLRKQTTATVVNSVKKAQTPPSKRPVLPNRAKNPIEPTSDKPETGPTLLKQAMDLMSSGDNQQTALELAHQAKKVFEKSAHEKPSLELVMCLHVTAAIYSSLGQYNEAIPILKSSIEIPIIQEGEEHALAKFSGLMQLGDTYAMLGQLEHSIMFYTKGLEVQRQVLGETDPRYGETCRYIAEVHVQALQFDEAERLCEMALDTHRTHDSCPSLDEAADRRLMGLICEAKGKHEAALEHLVLASMGMVANGQEVEVASVDCSIGDAYLSLCQYDEAIFAYQKALTVFEASKGENHPAVGLVFVRLADLFKRTGKIKESLSYCESALKIYENPLPGVSPEDIASGLTDVAAIYESMNEHEQALNLLQKALLLYNNAPYQQNTIAGIEAQMGVMYYIMGNYTESYNAFKSAISKLRAIGEKKSPMFGIVLNQMGLSCVQRYALSEAAELFEEARSILELEYGPYHPETLGIYSNLAGTYDAMGRLDDAIETLEYVVSLREEKLGTANPDGYDEKRRLSELLKEAGRARNRKSVSLEHLLDANTGALNNLVIRMAS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1969 736 ProSiteProfiles TPR repeat profile. 440 473 IPR019734 GO:0005515
Bisa08g1969 736 MobiDBLite consensus disorder prediction 1 229 - -
Bisa08g1969 736 Pfam MalT-like TPR region 245 427 IPR041617 -
Bisa08g1969 736 SUPERFAMILY TPR-like 252 551 IPR011990 GO:0005515
Bisa08g1969 736 Pfam Tetratricopeptide repeat 439 514 - -
Bisa08g1969 736 Pfam Tetratricopeptide repeat 610 681 - -
Bisa08g1969 736 SUPERFAMILY TPR-like 444 680 IPR011990 GO:0005515
Bisa08g1969 736 Gene3D Tetratricopeptide repeat domain 318 425 IPR011990 GO:0005515
Bisa08g1969 736 MobiDBLite consensus disorder prediction 11 40 - -
Bisa08g1969 736 Gene3D Tetratricopeptide repeat domain 426 600 IPR011990 GO:0005515
Bisa08g1969 736 ProSiteProfiles TPR repeat profile. 525 558 IPR019734 GO:0005515
Bisa08g1969 736 Coils Coil 538 558 - -
Bisa08g1969 736 Gene3D Tetratricopeptide repeat domain 222 317 IPR011990 GO:0005515
Bisa08g1969 736 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 39 723 - -
Bisa08g1969 736 MobiDBLite consensus disorder prediction 133 157 - -
Bisa08g1969 736 SMART tpr_5 440 473 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 650 683 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 273 306 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 566 599 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 525 558 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 608 641 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 482 515 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 358 391 IPR019734 GO:0005515
Bisa08g1969 736 SMART tpr_5 316 349 IPR019734 GO:0005515
Bisa08g1969 736 Gene3D Tetratricopeptide repeat domain 601 710 IPR011990 GO:0005515
Bisa08g1969 736 MobiDBLite consensus disorder prediction 60 76 - -
Bisa08g1969 736 MobiDBLite consensus disorder prediction 187 203 - -
Bisa08g1969 736 MobiDBLite consensus disorder prediction 77 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1969 Bisa-ChrBisa08 47304966 47307400 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1969 08 47304966 47307400 Bisa02g1312 02 22402058 22408328 CCT
Bisa08g1969 08 47304966 47307400 Bisa02g1312 02 22402058 22408328 ECH
Bisa08g1969 08 47304966 47307400 Bisa08g1969 08 47304966 47307400 ECH