Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1312 ATGTTCAACAAAATAACTTCTAGGTCAATAATCTTTCTTGTTTTACAGTGGCGTGAATCACTGCAACACGCTACCTCTTACATCTCTCAACTGGAGTCCCTTCACCCTGTCTTCCCATTTTCTTCTGCGAAGGGTGAGCGGTGGACATTACCCTTGTGCTCATCTCCATGGTTGATTATCAAGAATAGCTGTTCGATATTGGTTCTTCCTGAGAATTTGGCTCCTAAAGAAGTAAAGATGCCGGGAATTGTTACAAATGGATTTGAACACGAGGAGGGAGCAAATAAAATGAATGGGAACCCTTCCCCTTTTAAGGAAACTACAACACCAGTCAAGTCCGGAAAGGATTCCTCGAGTCCACAGAGCCCTCAGAATGCAGATCCAAATTTACCTGTTGATGGAGTACTGGTTGACACATCCATTGAGCAGCTTTATGAAAATGTCTGTGACATGCAAAGTTCTGATCACTCACCCACAAGACAAAGTCTTGGATCTGATGGTGAGGAGTCTAGGATTGATTCAGAATTACACCATTTAGTTGGAAGACCAATGAGAGAGGTGGAAATAATGGAAGAGGAGGTGGCTGAGAGGTCAGAAGGTGATTCCAGTAGTGAAACATCTTCTAGAAAAGGTACTTCAGTGAATGGTAAGAAGTTTGTAGAGGCCAATGAGAAGATTTCATCTGCAAGCACAAGTTCTGTTTCTTCTGAGAAATACAAGGCATCAAACTCACCGGGTCAAGTACAGGCCGATGAGAAGATTCCATCTGCAAATACAAGTTCTGTTTCTTCTGAAAAAAACAAAGCATCAAACTCACAGGGTCCGGTACAGGCGGATGAGAAGATTCTATCTGCAAATACAATTTCTGTTTCTCCTGAAAGAAACAAAGCATCAAAATCACAGGTGGACCCTGAAGCATCATCAAAATCAAAACCCAAGGGAAAAAGCACTCCCTCAAAGCCTCCCACTGATAGAAGGAACGATAAACCTTTGAGAAAACAGAAGAATGGAGTTTCTCGTGTGAAAAAATCAAAGAATTCTCCTATTAGAAGGTTATTGTCACAAAATCGTGCTGAGAATTCGACTGAAACAGCATCAGACAAGCCAGAGCTGGGGCCAGTTTTACTAAAGCAAGCAAGAGAGTTGATTTCATCAGGAGATAATCCTCAGAAAGCTCTTGCATTAGCTCTTCGAGCAATGAAATTATTCGAGAAGCACGCTGATGGAAAACCAAGTTTGGAGCTGGTTATGTGCCTGCATGTTACTGCTGCAATATATTGCAGCTTGGGCCAATACCATGAGGCAATTCCAATTCTTGAGCACTCCATTGAAATTCCTCTTGTTGACGAAGGTCAAGATCACGCCCTTGCTAAGTTTGCTGGTCACATGCAACTAGGTGATACCTATGCAATGTTAGGCCAGCTTGAAAATTCAATTATGTGCTACACAACAGGGTTGGAAGTCCAGAGGCAAGTTTTGGGAGAAACAGACCTGAGAGTTGGTGAAACTTGCAGGTATATAGCTGAAGCAAATGTCCAAGCGTTGCAATTTGATGAGGCTGAGAGGCTCTGCCAGATGGCTCTTGACATTCATAGAGCAAATGGTTCACCCCCTTCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTGATATGTGAAACTAAGGGGAATCACGAAGCAGCTCTAGAACACCTTGTTTTAGCCAGCATGGCAATGGTAGCTAACGGCCAGGAGGCAGAAGTGGCTTCTGTTGACAGCAGCGTTGGTGACACATACTTATCCTTGTCTCGGTATGATGAAGCTGTTTTTGCTTATCAGAAAGCACTTACAGTTTTCAAGACCAGCAAAGGAGAGAATCATCCAGCTGTGGCTTCGGTCTTTGCACGTTTGGCTGACTTGTATAACAGGACAGGGAAGATAAGGGAATCAAAATCTTACTGTGAGAGTGCACTTAGAATCTATGAGAAGCCCATGCCTGGGTTCCCTCCTGAGGAGATTGCTAGTGGTCTTATGGATGTTTCAGCTATCTACGAGTCGATGAACGAGCTTGAAGAGGCACTCAAGTTACTACGGAAGGCATTGGAGATATATAGAGACGCCCCAGGTCAGCAAAGCACCATAGCAGGAATTGAAGCTCAGATGGGGGTCATGCACTACATGTTGGGGAACTACACTGAATCTTACAACACTTTCAAGAATGCTATCTCAAAGCTTCGTGCTATTGGAGAAAAGAAATCAGCCTTCTTTGGTATTGCTCTTAATCAAATGGGACTTGCTTGTGTGCAGCGGTATGCCTTAGGTGAGGCTACAGAATTGTTTGAAGAAGCAAAGAATATATTGGAACAAGAATATGGACCATACCACCCTGAAACACTTGGGGTATACAGCAACCTTGCTGGCACCTATGATGCTATTGGCAGGGTGGATGAGGCAATTCAAATTCTGGAGTATGTTGTTGGGATGAGAGAGGAGAAACTAGGAACTGCAAATCCTGATGTGGATGACGAGAAGAGAAGGTTGGGTGAATTGTTGAAGGAAGCAGGTAGAGTTCGGAGCGGAACAGGCAGGTCTCTTGAGAACCTTCTCGATGCCAATGCGCCTTCTGTGAATATCATCAACGTGGGACAAGGAACTTGA 2640 0.4402 MFNKITSRSIIFLVLQWRESLQHATSYISQLESLHPVFPFSSAKGERWTLPLCSSPWLIIKNSCSILVLPENLAPKEVKMPGIVTNGFEHEEGANKMNGNPSPFKETTTPVKSGKDSSSPQSPQNADPNLPVDGVLVDTSIEQLYENVCDMQSSDHSPTRQSLGSDGEESRIDSELHHLVGRPMREVEIMEEEVAERSEGDSSSETSSRKGTSVNGKKFVEANEKISSASTSSVSSEKYKASNSPGQVQADEKIPSANTSSVSSEKNKASNSQGPVQADEKILSANTISVSPERNKASKSQVDPEASSKSKPKGKSTPSKPPTDRRNDKPLRKQKNGVSRVKKSKNSPIRRLLSQNRAENSTETASDKPELGPVLLKQARELISSGDNPQKALALALRAMKLFEKHADGKPSLELVMCLHVTAAIYCSLGQYHEAIPILEHSIEIPLVDEGQDHALAKFAGHMQLGDTYAMLGQLENSIMCYTTGLEVQRQVLGETDLRVGETCRYIAEANVQALQFDEAERLCQMALDIHRANGSPPSLEEAADRRLMGLICETKGNHEAALEHLVLASMAMVANGQEAEVASVDSSVGDTYLSLSRYDEAVFAYQKALTVFKTSKGENHPAVASVFARLADLYNRTGKIRESKSYCESALRIYEKPMPGFPPEEIASGLMDVSAIYESMNELEEALKLLRKALEIYRDAPGQQSTIAGIEAQMGVMHYMLGNYTESYNTFKNAISKLRAIGEKKSAFFGIALNQMGLACVQRYALGEATELFEEAKNILEQEYGPYHPETLGVYSNLAGTYDAIGRVDEAIQILEYVVGMREEKLGTANPDVDDEKRRLGELLKEAGRVRSGTGRSLENLLDANAPSVNIINVGQGT 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1312 879 SUPERFAMILY TPR-like 581 701 IPR011990 GO:0005515
Bisa02g1312 879 MobiDBLite consensus disorder prediction 100 128 - -
Bisa02g1312 879 Pfam Tetratricopeptide repeat 672 703 - -
Bisa02g1312 879 MobiDBLite consensus disorder prediction 348 367 - -
Bisa02g1312 879 MobiDBLite consensus disorder prediction 149 372 - -
Bisa02g1312 879 MobiDBLite consensus disorder prediction 149 165 - -
Bisa02g1312 879 Gene3D Tetratricopeptide repeat domain 750 862 IPR011990 GO:0005515
Bisa02g1312 879 ProSiteProfiles TPR repeat profile. 668 701 IPR019734 GO:0005515
Bisa02g1312 879 Gene3D Tetratricopeptide repeat domain 291 462 IPR011990 GO:0005515
Bisa02g1312 879 MobiDBLite consensus disorder prediction 318 335 - -
Bisa02g1312 879 Pfam Tetratricopeptide repeat 582 657 - -
Bisa02g1312 879 Pfam Tetratricopeptide repeat 752 819 - -
Bisa02g1312 879 SUPERFAMILY TPR-like 708 851 IPR011990 GO:0005515
Bisa02g1312 879 Gene3D Tetratricopeptide repeat domain 463 569 IPR011990 GO:0005515
Bisa02g1312 879 SMART tpr_5 501 534 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 751 784 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 793 826 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 416 449 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 459 492 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 709 742 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 625 658 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 668 701 IPR019734 GO:0005515
Bisa02g1312 879 SMART tpr_5 583 616 IPR019734 GO:0005515
Bisa02g1312 879 MobiDBLite consensus disorder prediction 90 133 - -
Bisa02g1312 879 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 123 866 - -
Bisa02g1312 879 ProSiteProfiles TPR repeat profile. 583 616 IPR019734 GO:0005515
Bisa02g1312 879 MobiDBLite consensus disorder prediction 224 317 - -
Bisa02g1312 879 MobiDBLite consensus disorder prediction 166 204 - -
Bisa02g1312 879 SUPERFAMILY HCP-like 398 610 - -
Bisa02g1312 879 Gene3D Tetratricopeptide repeat domain 570 749 IPR011990 GO:0005515
Bisa02g1312 879 Coils Coil 674 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1312 Bisa-ChrBisa02 22402058 22408328 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1969 08 47304966 47307400 Bisa02g1312 02 22402058 22408328 CCT
Bisa08g1969 08 47304966 47307400 Bisa02g1312 02 22402058 22408328 ECH
Bisa02g1312 02 22402058 22408328 Bisa02g1312 02 22402058 22408328 ECH