Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3091 ATGGCCAACCAAAGGCATCTCCTATCTTTCTTCTTCATCATCATTTCTTTTGTTGCTTGTTATTGCACCTTGCAAGAGGACCCACTTAGTTCATACGTTGATGACTCACCTAATTGCAATTCCACTGATGATGGTGGGACATTCAACAACTTGATCAAGCAAAGTACAGATGTTTTGAGCTTCAAGAGTGGGCTTGATAGGTTAGCTGGTTTTTCTCCTTCGCTTAACACAGTTAATGTCATTGATTATGGAGCCAAAGGGGATAATACGACTGATGACACACAGGCATTCAAGGAGGCTTGGAAAGTTGCATGCTCTTCTGACGGAGCCGTTGCTCTTGTTGTGCCTCATCAGAACTATCTACTCAAGCCAATAAGATTCTCTGGCCCTTGCAAATCTAACATCACAGTGCATATTTCTGGAGTGGTTGAAGCGTCAGATGATCCTTCAGACTACAGCGAAGACCCCACACACTGGCTTATATTCGACAGTGTTCAGAAGCTATTGGTTCGAGGCGATGGAACCATCAATGGAAATGGAAACATATGGTGGCAAAATTCATGCAAGAGGAACAAGAAGAAAGCTCTGACTTTCTATAATTGTAAGAATTTGGTGGTTGAGGACTTGACGATTAAAAATGGCCAACAAATTCAAGTATCTTTCCAGCACTCCAAGTATGTTAGAGCTTCGGGCCTCACTGTGACTGCCCCAGAGGATAGTCCCAACACGGATGGAATTCATGTCACAAAAACCCAAAACATCCAAATCTCAAACTCTTTCATAGGAACTGGAGATGATTGTATATCAATTGTAAGTGGATCTCAGAATTTACAAGCCACAGACATCACCTGCGGTCCAGGCCATGGCATCAGTATCGGAAGCTTGGGGGCCAACAAAGCAAGGGCGTCAGTTTCAGACATAACAGTGAATGGAGCTAAGTTTTCTGGAACTAAAAATGGAGTTAGAATCAAAACATGGCAGGGTGGATCAGGAAATGCAAGCAACATCAAGTTCAAGAATATAGAAATGGTCAACGTGACCAACCCCATAATAATAGACCAGAACTACTGTGACCACAAGAAGCCATGCAAACAACAGCACTCAGCGGTTGAGATTAAAAATGTGGTGTACCAGAACATAAAAGGTACGAGTGCTTCGGAAGTGGGTGTGAAGTTTGATTGCAGCGAGAGCTTTCCATGCGAGGACATAGTGATGCAGAACATAGACCTGCGACTTGAAGAAGGAGACACAGCCAAGGCTACATGTAACAATGTTCAAATGTTCTCCATAGGCGACGTTAGCCCTCGATGCCCTTAA 1317 0.4351 MANQRHLLSFFFIIISFVACYCTLQEDPLSSYVDDSPNCNSTDDGGTFNNLIKQSTDVLSFKSGLDRLAGFSPSLNTVNVIDYGAKGDNTTDDTQAFKEAWKVACSSDGAVALVVPHQNYLLKPIRFSGPCKSNITVHISGVVEASDDPSDYSEDPTHWLIFDSVQKLLVRGDGTINGNGNIWWQNSCKRNKKKALTFYNCKNLVVEDLTIKNGQQIQVSFQHSKYVRASGLTVTAPEDSPNTDGIHVTKTQNIQISNSFIGTGDDCISIVSGSQNLQATDITCGPGHGISIGSLGANKARASVSDITVNGAKFSGTKNGVRIKTWQGGSGNASNIKFKNIEMVNVTNPIIIDQNYCDHKKPCKQQHSAVEIKNVVYQNIKGTSASEVGVKFDCSESFPCEDIVMQNIDLRLEEGDTAKATCNNVQMFSIGDVSPRCP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3091 438 SUPERFAMILY Pectin lyase-like 75 437 IPR011050 -
Bisa07g3091 438 Gene3D - 71 434 IPR012334 -
Bisa07g3091 438 FunFam Polygalacturonase QRT2 68 438 - -
Bisa07g3091 438 ProSitePatterns Polygalacturonase active site. 281 294 IPR000743 GO:0004650|GO:0005975
Bisa07g3091 438 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bisa07g3091 438 Pfam Glycosyl hydrolases family 28 105 426 IPR000743 GO:0004650|GO:0005975
Bisa07g3091 438 PANTHER - 76 425 - -
Bisa07g3091 438 SMART pbh1 304 325 IPR006626 -
Bisa07g3091 438 SMART pbh1 201 250 IPR006626 -
Bisa07g3091 438 SMART pbh1 251 272 IPR006626 -
Bisa07g3091 438 SMART pbh1 333 354 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3091 Bisa-ChrBisa07 65047700 65051337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g3091 5 437 Glycoside Hydrolase AT3G57510 52.466 4.19e-145 419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g3091 07 65047700 65051337 Bisa03g2356 03 34602038 34605224 CCT
Bisa07g3091 07 65047700 65051337 Bisa07g3091 07 65047700 65051337 ECH