Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g3081 ATGTCTAGCTCCACAAAAGTTTTGGATCCTGCATTCCAGGCAGTGGGTCAAAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAAATCTGAGTATGGAAAGTTCTACATGGGAGATTCGTACATTATTTTGCAGACAACACAAGGCAAAGGGGGCACTTATTTCTATGACATACACTTCTGGATTGGAAAGGATACGAGTCAGGATGAGGCAGGGACAGCTGCCATTAAAACCATTGAACTTGATGCAGCTCTTGGAGGACGTGCAGTGCAGCACAGGGAAATTCAAGGCCATGAATCTGACAAATTTTTGTCATACTTTAAACCATGTATCATACCGTTAGAGGGAGGTGTTGCATCTGGATTTAAAAAACCTGAAGAAGAAGTGTTTGAAACACGTTTGTACATATGCAAAGGAAAACGAGTTGTCCCTTTTGCGCGGTCTTCACTGAATCATGATGATGTATTTATCCTTGACACTCAAAAAAAGATTTATCAATTCAATGGGGCAAATTCAAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTAATCCAGTTTCTAAAGGAAAAGTATCATGAGGGGAAATGTGACATTGCAATTGTTGATGATGGGAAGTTGGATACGGAGTCCGATTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGAAAGAAGGTCATCAGTGAGGATGATATTATTCCAGAGACTACTCCTGCTCAACTTTATAGTATTGTCGACGGCGAGGTCAAGCCTGTTGAAGGTGAACTGTCTAAATCGCTGTTGGAGAATAACAAATGCTATTTACTGGACTGTGGTGCTGAGGTATTTATCTGGGTTGGCCGGGTAACACAGGTTGAAGAACGAAAAGCAGCGTGCCAAGCAGCGGAGGAGTTTGTTGCAGGTCAAAATAGGCCAAAATCTACACGGATAACCAGAATTATTCAAGGCTATGAGACACATACATTCAAGTCCATCTTTGATACTTGGCCATCAGGATCCACTTCTACAAGTCCTGAGGAAGGGAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTCAAGGGAATGACAAAAAGTACTCCGGTCAATGAAGAAATTCCACCTTTGCTTGAAGGAGGTGGAAAGATGGAAGTATGGCTGATCAATGGAAGTGCCAAGAATCCATTGCCTAAGGAGGATATTGGTAAATTTTACAGTGGAGATTGTTACATAGTGTTGTACACTTACCACTCTGGTGAGAGGAAGGAGGACTACTTCTTGTGCTGCTGGTTTGGGAAGGACAGCATTGAGGAGGACCAAAGGATGGCTACTCGATTGGCCAATACAATGTTCAACTCACTAAAGGGTAGACCTGTTCAGGGCCGCATATTTGAAGGTAAAGAGCCACCACAATTTGTTGCTCTTTTTCAGCCTATGGTGATCCTTAAGGGGGGCTTGAGTACCGGTTACAAAAACTTAATAGCAGACAAAGGTTTGCCAGATGAGACATACACAGCTGAAAGTATTGCACTGATTCGAATATCTGGAACTTCTATTCATAACAATAAAGCTCTGCAAGTTGATGCAGTGGGTACATCATTAAACTCCAATGAGTGTTTCCTCCTGCAATCTGGTCAATCAGTTTTCACTTGGCATGGAAGTCAATGCTCTTTTGAGCAGCAGCAGCTAGCTGCAAAAGTTGCTGAATTTTTGAAGCCAGGAGTTGCTTTAAAACATGCTAAAGAAGGAACGGAAAGCTCAGCTTTCTGGTCTGCACTTGGAGGAAAACAAAGCTTCACCAGCAAAAAGTCGACCAACGACATTGTTAGAGATCCACATTTGTTCACATTTTCATTAAACAAAGGAAAGTTTCAGGTAGAAGAGGTTTACAACTTTTCCCAAGATGATCTATTGACAGAGGATATCCTCATACTTGACACTCATGCTGAAGTATTTGTCTGGGTTGGTCAGTCTGTGGACTCAAAAGAAAAGCAAAATGCTTTTGAAGTTGGCGAAAAATATATAGATATTGCTGCATCTCTGGAGGGACTCTCTCCTCATGTGCCACTATATAAAGTTACAGAAGGGAACGAACCTTGCTTCTTCACAACATACTTTTCATGGGATCATGCAAAAGCTACAGTTCAAGGAAACTCATTCCAGAAAAAGGTGTCATTGCTCTTTGGGATTGGCCATGCTGTGGAGGAGAAGTCCAATGGATCAAGTCAAGGAGGACCAAGACAAAGAGCAGAAGCTCTAGCAGCCTTATCTTCTGCATTTAATTCATCTTCGGATAAAACATCCAGTATGTCACAGGATAGACTGAATGGACTAAATCAAGGAGGTCCAAGACAAAGAGCGGAAGCTTTAGCTGCCTTAAGCTCTGCATTTAATTCATCATCCGGAAGTAGAACTATTGCTCCCAGGCCTGCTGGAACAAGTCAAGGCTCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCAAACGTTCTTACTGCTGAAAAGAAGAAGCAATTGCCTGATGCCTCTCCTCCTGGGGCGAGCAGCAGTCCTGTTTCAGAAGAAACTAAAAGTGAAAGCGGTAATTCTGAAACAGGAGGTCCTGAGGAAGTTGCAGAAGTTAAGGAGACACAGGAACTTGCATCTGAAACTGGTAGCAATGGGGATTTTGAACCAAAACAGAAAGATTTTGAGGATGGTAAAGATAGTCAAAGTAGTCAGAGCACGTTCAGTTATGATCAATTAAAGACTAAATCCAACAATCCTGTGTCTGGGATCGATTTTAAAAGGAGAGAGGCCTATCTATCAGATGAAGACTTCCAAACTGTATTTGGAATGACAAAAGTGGCGTTCTATAAATTGCCAAAATGGAAGCAAGACATGCAGAAAAGGAAAGCTGATTTGTTTTAG 2925 0.4222 MSSSTKVLDPAFQAVGQKVGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGTYFYDIHFWIGKDTSQDEAGTAAIKTIELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEVFETRLYICKGKRVVPFARSSLNHDDVFILDTQKKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDIAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETTPAQLYSIVDGEVKPVEGELSKSLLENNKCYLLDCGAEVFIWVGRVTQVEERKAACQAAEEFVAGQNRPKSTRITRIIQGYETHTFKSIFDTWPSGSTSTSPEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKMEVWLINGSAKNPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQRMATRLANTMFNSLKGRPVQGRIFEGKEPPQFVALFQPMVILKGGLSTGYKNLIADKGLPDETYTAESIALIRISGTSIHNNKALQVDAVGTSLNSNECFLLQSGQSVFTWHGSQCSFEQQQLAAKVAEFLKPGVALKHAKEGTESSAFWSALGGKQSFTSKKSTNDIVRDPHLFTFSLNKGKFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQNAFEVGEKYIDIAASLEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKATVQGNSFQKKVSLLFGIGHAVEEKSNGSSQGGPRQRAEALAALSSAFNSSSDKTSSMSQDRLNGLNQGGPRQRAEALAALSSAFNSSSGSRTIAPRPAGTSQGSQRAAAVAALSNVLTAEKKKQLPDASPPGASSSPVSEETKSESGNSETGGPEEVAEVKETQELASETGSNGDFEPKQKDFEDGKDSQSSQSTFSYDQLKTKSNNPVSGIDFKRREAYLSDEDFQTVFGMTKVAFYKLPKWKQDMQKRKADLF 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g3081 974 CDD gelsolin_S2_like 138 227 - -
Bisa07g3081 974 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Bisa07g3081 974 SUPERFAMILY Actin depolymerizing proteins 129 232 - -
Bisa07g3081 974 MobiDBLite consensus disorder prediction 767 826 - -
Bisa07g3081 974 CDD gelsolin_S4_like 381 482 - -
Bisa07g3081 974 Gene3D Severin 609 730 IPR029006 -
Bisa07g3081 974 Gene3D Severin 384 512 IPR029006 -
Bisa07g3081 974 FunFam Gelsolin 514 608 - -
Bisa07g3081 974 CDD gelsolin_S1_like 12 124 - -
Bisa07g3081 974 CDD gelsolin_S5_like 514 604 - -
Bisa07g3081 974 Pfam Villin headpiece domain 939 974 IPR003128 GO:0003779|GO:0007010
Bisa07g3081 974 CDD gelsolin_S3_like 249 338 - -
Bisa07g3081 974 Gene3D Severin 241 354 IPR029006 -
Bisa07g3081 974 MobiDBLite consensus disorder prediction 848 870 - -
Bisa07g3081 974 MobiDBLite consensus disorder prediction 767 785 - -
Bisa07g3081 974 PRINTS Gelsolin family signature 432 450 IPR007122 GO:0051015
Bisa07g3081 974 PRINTS Gelsolin family signature 669 688 IPR007122 GO:0051015
Bisa07g3081 974 PRINTS Gelsolin family signature 528 548 IPR007122 GO:0051015
Bisa07g3081 974 PRINTS Gelsolin family signature 406 422 IPR007122 GO:0051015
Bisa07g3081 974 PRINTS Gelsolin family signature 588 607 IPR007122 GO:0051015
Bisa07g3081 974 PRINTS Gelsolin family signature 465 485 IPR007122 GO:0051015
Bisa07g3081 974 PRINTS Gelsolin family signature 318 339 IPR007122 GO:0051015
Bisa07g3081 974 PRINTS Gelsolin family signature 640 662 IPR007122 GO:0051015
Bisa07g3081 974 MobiDBLite consensus disorder prediction 840 930 - -
Bisa07g3081 974 FunFam Villin-like 1 609 730 - -
Bisa07g3081 974 SUPERFAMILY Actin depolymerizing proteins 378 523 - -
Bisa07g3081 974 SUPERFAMILY Actin depolymerizing proteins 218 340 - -
Bisa07g3081 974 SUPERFAMILY VHP, Villin headpiece domain 910 974 IPR036886 GO:0003779|GO:0007010
Bisa07g3081 974 SMART VILL_6 619 714 IPR007122 GO:0051015
Bisa07g3081 974 SMART VILL_6 19 117 IPR007122 GO:0051015
Bisa07g3081 974 SMART VILL_6 139 229 IPR007122 GO:0051015
Bisa07g3081 974 SMART VILL_6 513 602 IPR007122 GO:0051015
Bisa07g3081 974 SMART VILL_6 387 485 IPR007122 GO:0051015
Bisa07g3081 974 SMART VILL_6 246 339 IPR007122 GO:0051015
Bisa07g3081 974 SMART VHP_1 939 974 IPR003128 GO:0003779|GO:0007010
Bisa07g3081 974 Gene3D Villin headpiece domain 899 974 IPR036886 GO:0003779|GO:0007010
Bisa07g3081 974 FunFam Villin-4 243 349 - -
Bisa07g3081 974 CDD gelsolin_S6_like 617 715 - -
Bisa07g3081 974 PANTHER VILLIN 3 964 IPR007122 GO:0051015
Bisa07g3081 974 SUPERFAMILY Actin depolymerizing proteins 591 713 - -
Bisa07g3081 974 Gene3D Severin 133 240 IPR029006 -
Bisa07g3081 974 FunFam Gelsolin 6 131 - -
Bisa07g3081 974 SUPERFAMILY Actin depolymerizing proteins 505 606 - -
Bisa07g3081 974 MobiDBLite consensus disorder prediction 908 929 - -
Bisa07g3081 974 Pfam Gelsolin repeat 530 578 IPR007123 -
Bisa07g3081 974 Pfam Gelsolin repeat 149 212 IPR007123 -
Bisa07g3081 974 Pfam Gelsolin repeat 400 478 IPR007123 -
Bisa07g3081 974 Pfam Gelsolin repeat 630 708 IPR007123 -
Bisa07g3081 974 Pfam Gelsolin repeat 29 111 IPR007123 -
Bisa07g3081 974 Pfam Gelsolin repeat 259 332 IPR007123 -
Bisa07g3081 974 MobiDBLite consensus disorder prediction 798 826 - -
Bisa07g3081 974 Gene3D Severin 514 607 IPR029006 -
Bisa07g3081 974 Gene3D Severin 5 132 IPR029006 -
Bisa07g3081 974 ProSiteProfiles Headpiece (HP) domain profile. 909 974 IPR003128 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g3081 Bisa-ChrBisa07 64939317 64949136 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2376 03 35031324 35047869 Bisa07g3081 07 64939317 64949136 CCT
Bisa07g3081 07 64939317 64949136 Bisa07g3081 07 64939317 64949136 ECH