Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2376 ATGAGTAACTCTACAAAAGTTTTGGATCCTGCCTTCCAGGGAGTGGGGACTGAAATATGGAGGATTGAGGATTTTCAGCCAGTTCCATTGCCCAAATCTGAATATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGCGAAAGGAGGCGCTTATCTTTATGATATACACTTCTGGCTTGGAAAGGACACAACTCAGGATGAGGCTGGAACAGCAGCAATCAAAACTGTTGAACTTGATGCTGCTCTTGGAGGACGTGCAGTACAGCACAGGGAACTCCAAGGCCATGAAACTGACAAGTTTTTGTCATACTTTAAACCATGTATCATACCATTAGAGGGGGGCGTTGCATCTGGATTTAGAAAACCTGAAGAAGAAGAGTTTGAAACACGTGTGTACATATGCAAGGGAAAAAGAGCTGTCAGGATGAGACAGGCACAGTTTTCTCTTTACATGAACTTCATAGATTTGGTCCCTTTTGCACGGTCTTCACTGAATCACGATGATGTTTTTATTCTAGACAGTCAGAATAAAATTTATCAGTTCAATGGTGCAAATTCCAATATTCAAGAAAGAGCTAAGGCTTTGGAAGTAATTCAGTTTTTGAAAGAAAAGTATCATGAAGGGAAATGTGACGTTGCAATTGTTGATGATGGCAGGTTGGACACTGAGTCAGACTCAGGTGAATTTTGGGTTCTCTTAGGTGGTTTTGCTCCTATTGGAAAGAAGGTCATCTCTGAGGATGATATCATTCCAGAGGCCACTCCTGCTCAACTTTACTGTATTGTTGATGGTGAAGTTAAGTCTGTGGAAGGTGAACTGTCTAAATCACTAATGGAGAATAACAAATGCTATTTACTGGACTGTGGGGCTGAGGTATTTGTTTGGGTTGGCCGGGTAACACAAGTTGAAGAAAGAAAAGCAGCCTGTCAAGCAGCTGAGGAGTTTGTTGTGAGTCAAAATAGGCCAAAATCTACAAAAATAACCAGAATGATTCAAGGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCAACAGGATCTACCAATACTGGTGCTGAGGAAGGAAGAGGAAAAGTATGGCGGATTGATGGAGATAACAAGAATCCATTGCCTAAGGAGGATATAGGTAAATTTTATAGTGGAGATTGCTACATAATACTGTACAGTTACCACGCTGGGGAGAGGAAGGAAGACTACTTTTTATGCTGTTGGTTCGGGAAAGACAGCATTCAGGAGGACCAAAGAATGGCAACTCAATTGACCGATACAATGTGCAACTCATTAAAGGGTAGACCTGTTAAGGGTCGTATATTTGAAGGTAAAGAGCCACCACAGTTTATTGCTCTTTTTCATCCTATGGTGGTCCTTAAGGGTGGTCTAAGCTCTGGTTACAAACAATCAATTGCTGACAAAGATTTGGCAGATGAGACATATACAGCAGAGGGTATTGCACTCATTCAAATTTCTGGAACTTCCAATTATAACAATAAAGCAGTGCAAGTTGATGCGGTGGCAACATCACTAAATTCTACTGAGTGTTTCCTCCTGCAATCTGGGACAGTAATTTTCATTTGGCACGGAAATCAAGCTCCTTTTGAACAGCAGCAGGTAGCAGCAAAAGCTGCAGGATTTTTGAAGCCAGGAGTTGCTTTAAAACATGCTAAAGAAGGAACGGAAAGCTCTGCTTTCTGGTCGGCCATAGGAGGAAAACAAAGTTATGTCAGCAAAAAAGTCACTAATGACACTGTCAGAGAACCACATTTGTTTACTTACTCGTTTAATAAAGGAAAGTTTCAGATTGAGGAGGTTTTCAATTTCTCCCAAGATGATCTGTTACCAGAGGATATCCTCGTACTTGACACACATGCCGAAGTATTTGTCTGGGTTGGTCATTCTGTGAGCTCAAAAGAGCGGCAAAATGCGTTTGAAATTGGCCAAGTTCTAGGAAACTCCTTCCAGAAGAAGGTGACATTACTCTTTGGGATTGGTAATGTTGTGGAGGATAAGTCTGATGGATCTGGTCCAAGACAAAGAGCAGAAGCGTTGGCTGCCTTAAATTCTGCATTTAATTCATCTTCTGAGAAAACATCCAGTGTGGCACAGGAGAGGTTGAATGAATTATATCAAGGAGGACCAAGACAAAGAGCGGAAGCTTTAGCTGCCTTAAATTCTGCTTTTAATTCATCATCAGGAACTAAAGCTTCTTCACCCAGGCCTGGTACAACAAGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCATCAGTTCTCACTGCTGAAAAGAAGCAATCACCTGAGACTTCGCCACGTGGAAGTCCTAATGCAGAAACCGGGGCTCGCGAAGACAAGAGGGAGACTGCCGATGCTAAAACAGAAGGTCTTGAAGAAGCCCAGGAGACAGAGGAACATGCACCTGAAACTGGGAGCAATGAGGATTCAGAACCAAAAGAAAATGTGGAGGATGGGATTGATAGACCAGGTAGCGACGTGACATATAGTTATGATCAATTAAAGAATAATTCTGATAATCCAGTGTCTGGGATTGACATGAAACGGAGAGAGGCTTATCTGTCTAATGATGAATTTGAAACTGTACTTGGAATGACAAAAGAAGCATTTTATGAAATGCCAAAATGGAAGCAAGACATGCAGAAAAAGAAAGTTCATTTGTTTTAG 2709 0.4153 MSNSTKVLDPAFQGVGTEIWRIEDFQPVPLPKSEYGKFYMGDSYIILQTTQAKGGAYLYDIHFWLGKDTTQDEAGTAAIKTVELDAALGGRAVQHRELQGHETDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETRVYICKGKRAVRMRQAQFSLYMNFIDLVPFARSSLNHDDVFILDSQNKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGRLDTESDSGEFWVLLGGFAPIGKKVISEDDIIPEATPAQLYCIVDGEVKSVEGELSKSLMENNKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVVSQNRPKSTKITRMIQGYETHSFKSNFDSWPTGSTNTGAEEGRGKVWRIDGDNKNPLPKEDIGKFYSGDCYIILYSYHAGERKEDYFLCCWFGKDSIQEDQRMATQLTDTMCNSLKGRPVKGRIFEGKEPPQFIALFHPMVVLKGGLSSGYKQSIADKDLADETYTAEGIALIQISGTSNYNNKAVQVDAVATSLNSTECFLLQSGTVIFIWHGNQAPFEQQQVAAKAAGFLKPGVALKHAKEGTESSAFWSAIGGKQSYVSKKVTNDTVREPHLFTYSFNKGKFQIEEVFNFSQDDLLPEDILVLDTHAEVFVWVGHSVSSKERQNAFEIGQVLGNSFQKKVTLLFGIGNVVEDKSDGSGPRQRAEALAALNSAFNSSSEKTSSVAQERLNELYQGGPRQRAEALAALNSAFNSSSGTKASSPRPGTTSQGSQRAAAVAALSSVLTAEKKQSPETSPRGSPNAETGAREDKRETADAKTEGLEEAQETEEHAPETGSNEDSEPKENVEDGIDRPGSDVTYSYDQLKNNSDNPVSGIDMKRREAYLSNDEFETVLGMTKEAFYEMPKWKQDMQKKKVHLF 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2376 902 Gene3D Severin 495 584 IPR029006 -
Bisa03g2376 902 CDD gelsolin_S1_like 12 120 - -
Bisa03g2376 902 SUPERFAMILY Actin depolymerizing proteins 484 588 - -
Bisa03g2376 902 CDD gelsolin_S4_like 362 459 - -
Bisa03g2376 902 ProSiteProfiles Headpiece (HP) domain profile. 837 902 IPR003128 GO:0003779|GO:0007010
Bisa03g2376 902 Gene3D Severin 258 359 IPR029006 -
Bisa03g2376 902 Pfam Gelsolin repeat 163 224 IPR007123 -
Bisa03g2376 902 Pfam Gelsolin repeat 25 107 IPR007123 -
Bisa03g2376 902 Pfam Gelsolin repeat 376 456 IPR007123 -
Bisa03g2376 902 Pfam Gelsolin repeat 608 650 IPR007123 -
Bisa03g2376 902 Pfam Gelsolin repeat 275 345 IPR007123 -
Bisa03g2376 902 Pfam Gelsolin repeat 506 551 IPR007123 -
Bisa03g2376 902 CDD gelsolin_S3_like 262 351 - -
Bisa03g2376 902 CDD gelsolin_S5_like 491 581 - -
Bisa03g2376 902 FunFam Gelsolin 491 585 - -
Bisa03g2376 902 Gene3D Severin 590 707 IPR029006 -
Bisa03g2376 902 SUPERFAMILY Actin depolymerizing proteins 366 502 - -
Bisa03g2376 902 Gene3D Severin 5 127 IPR029006 -
Bisa03g2376 902 PRINTS Gelsolin family signature 617 639 IPR007122 GO:0051015
Bisa03g2376 902 PRINTS Gelsolin family signature 505 525 IPR007122 GO:0051015
Bisa03g2376 902 PRINTS Gelsolin family signature 331 352 IPR007122 GO:0051015
Bisa03g2376 902 PRINTS Gelsolin family signature 565 584 IPR007122 GO:0051015
Bisa03g2376 902 SMART VILL_6 364 462 IPR007122 GO:0051015
Bisa03g2376 902 SMART VILL_6 490 579 IPR007122 GO:0051015
Bisa03g2376 902 SMART VILL_6 259 352 IPR007122 GO:0051015
Bisa03g2376 902 SMART VILL_6 146 242 IPR007122 GO:0051015
Bisa03g2376 902 SMART VILL_6 596 673 IPR007122 GO:0051015
Bisa03g2376 902 SMART VILL_6 15 113 IPR007122 GO:0051015
Bisa03g2376 902 SUPERFAMILY Actin depolymerizing proteins 568 663 - -
Bisa03g2376 902 CDD gelsolin_S2_like 134 240 - -
Bisa03g2376 902 PANTHER VILLIN 4 892 IPR007122 GO:0051015
Bisa03g2376 902 SUPERFAMILY Actin depolymerizing proteins 15 144 - -
Bisa03g2376 902 Gene3D Villin headpiece domain 841 902 IPR036886 GO:0003779|GO:0007010
Bisa03g2376 902 FunFam Villin-4 256 362 - -
Bisa03g2376 902 SUPERFAMILY VHP, Villin headpiece domain 842 902 IPR036886 GO:0003779|GO:0007010
Bisa03g2376 902 SMART VHP_1 867 902 IPR003128 GO:0003779|GO:0007010
Bisa03g2376 902 FunFam Gelsolin 3 127 - -
Bisa03g2376 902 Gene3D Severin 128 250 IPR029006 -
Bisa03g2376 902 MobiDBLite consensus disorder prediction 736 785 - -
Bisa03g2376 902 MobiDBLite consensus disorder prediction 787 835 - -
Bisa03g2376 902 Pfam Villin headpiece domain 867 902 IPR003128 GO:0003779|GO:0007010
Bisa03g2376 902 MobiDBLite consensus disorder prediction 843 857 - -
Bisa03g2376 902 SUPERFAMILY Actin depolymerizing proteins 126 245 - -
Bisa03g2376 902 SUPERFAMILY Actin depolymerizing proteins 231 353 - -
Bisa03g2376 902 Gene3D Severin 360 494 IPR029006 -
Bisa03g2376 902 MobiDBLite consensus disorder prediction 736 858 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2376 Bisa-ChrBisa03 35031324 35047869 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2376 03 35031324 35047869 Bisa07g3081 07 64939317 64949136 CCT