Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2834 ATGGGTGCAAGTCGAAAACTTCAGGGAGAGATCGATCGTGTTCTGAAGAAGGTCCAAGAAGGCGTTGACGTCTTCGATAGTATCTGGAATAAGGTTTACGATACTGACAATGCGAATCAGAAGGAGAAATTTGAGGCAGACCTGAAAAAGGAGATTAAGAAGCTCCAGAGGTACAGAGACCAGATTAAGACTTGGATTCAGTCTAGCGAGATTAAGGATAAGAAGGTTAGTGCGTCTTATGAGCAGGCCCTGGTGGATGCTCGCAAGCTCATTGAGCGGGAAATGGAAAGATTTAAGATCTGTGAGAAGGAGACTAAGACCAAAGCTTTCTCCAAAGAAGGCTTAGGCCAAAAGCCCAAAACTGATCCAAAGGAAAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGAGAGTTGGAATCTCAGATTGATAACTTTGAAGCTGAGGTTGAAGGGCTTTCTGTCAAGAAAGGAAAGAATAGGCCACCCAGATTGACACATCTAGAGACATCAATTACTCGACATAAGGCTCATATAAAGAAATGTGAATTCCTTTTGAGGCTACTAGATAATGAAGAATTAAGTCCTGAGCAGGTTAATGATGTCAAAGTTTTCCTGGACGACTATGTAGAGCGTAACCAGGAGGACTTTGATGAATTTAGTGATGTTGATGAGTTATACAGTTCGTTACCTTTAGACAAGGTGGAATCTCTGGAAGATCTTGTGACAATTGGCCCCCCTGGTATTGCTAAGGGTGCACCTGGTGTTAGCTTAAAGACTTCTGTGGCAGCATCAGCACCATTGTCAGCATCAGCATCTCAGACATCTGAGCAAGCTGAAGATACAGCTTCCCAGGATAGCAATTCTGATATCATTGCAAGAACTCCTCCTTCGAAAAGTAGTGGAATTAGTTATGCTACTCCAATGCCAGCTGGAAACCATGCTAGTTCCGTTTCTATGAATGTTTCAGCTCATAACTTATCTGGAGCACCAGCTATTGCATCAGGCCTCCCTGGTTCAAATTCTGTTCAGAGTAACTTGGAGAATCCTGGTGTTGCCAATTCTTCATCTTCTGTTAATCAGTCTAGCCCTATAAAGGAAGAAGAAAATAATGGCTTCCCTGGACGGAGACCATCTCCATCACTTTCTGATGCTGTGCTTGTGAGAGGCATCAGCAGAAACAGTCTGTCCAATCAAGCAACCTCTAGTATCCCTCTTGGTTCAGGCAACATGGTTTCCAGCAATGGGGCTCTTGGTTCAGTCCCTTCAGCCTCTGAAATAACTAAGAGAAACATATTGGGTGCTGATGAAAGACTTGGAAGTAGTGGCATAGTGCAGCCTCTTGTATCCCCCCTTAGTAGCAGAGCAATCTTGCCTCAGGCTGCAAAGGGTAATGATGGAACTTCTTCAATTGACTCTAGTAATGTTAACGAGGCTGCTGCTGTATCCGGGAGAGTATTTTCTCCTCCTTTGGTTCCTGGCATGCAATGGAGACCTGGAAGCCCATTCCAGAACCAAAATGAGATGGGGCAAATTCGTGGAAGAGCTGAAATAGCTCCTGATCAAAGAGAAAAATTTTTGCAGAAGTTTCAGCAAGTTCAACAAGGGCACAGTACCCTTCTTGGTATGCCTTCTCTTGCTGGAGGAAATCATAGGCAATTTTCTGCTCACCAGCAAAACCCTCTATTGCAGCAGCTTAACTCTCAAGGCTCATCCGTTTCCTCTCAGTCTTGTCTGGGACTTGGAGTGCAGGCACCAGGTTTTAATAGTATTTCATCTACCTCACTACAGCTGACACCTAATTCTATCCATAACCCATCTAACCAGCAGCAGCTGATATCAGGTGTTTCTAAAGATGCTGATGTTAGCAATGCAGAGGTCGAAGAACAGCAGCAGCAGAATTTTCCTGATGAGGGAGCAACTGAGTCTACTGCTAGTACTGGGACTGGCAAGAATCTTATAAATGAAGATGATTTGAAATCCACATATATTGTAGATTCTCCTGCAGGGTTATCTGGCTCTCTTCCAGAGCCTGCTCCGACTTCCAGAGATACTGACTTGTCTCTAGGCCAACCTTTACAACCCAATCAACCTTCTGGTAACCTTGGTGTCATTGGAAGGAGAACTGGTGCCGACCTTGGAGCCATTGGTGATAACTTTAGTGGACCAAGTGTTAATTCTGGTGGAATGCGTGATCAGTTATATAATTTGCAGATGCTTGAAGCGGCTTACTACAAACTTCCGCAACCTAAAGATTCAGAATGTCCGAGGACTTATACTTCTAGGCACCCAATAATAACACCTCCTAGTTTTCCTGAAGCACAGGCACCAATTGTTAATAATCCTGCCTTTTGGGAGAGAATTAGCCTTGAACCATTTGGAACTGATACCTTGTTCTTTGCATTCTATTATCAGCAGAACACTTATCAACAATATTTGGCTGCAAAAGAACTAAAGCAGCAGTCTTGGAGATATCACAGAAAGTATAACACATGGTTTCAACGACATGAAGAGCCAAAAGTTGCTACTGATGAATGTGAGCAGGGAACATATGTATACTTCGATTTCCATATTGCAAATGATGACCCACAACATGGGTGGTGTCAAAGAATTAAGACCGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAACTTATTGTATAG 2676 0.432 MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQKPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAEVEGLSVKKGKNRPPRLTHLETSITRHKAHIKKCEFLLRLLDNEELSPEQVNDVKVFLDDYVERNQEDFDEFSDVDELYSSLPLDKVESLEDLVTIGPPGIAKGAPGVSLKTSVAASAPLSASASQTSEQAEDTASQDSNSDIIARTPPSKSSGISYATPMPAGNHASSVSMNVSAHNLSGAPAIASGLPGSNSVQSNLENPGVANSSSSVNQSSPIKEEENNGFPGRRPSPSLSDAVLVRGISRNSLSNQATSSIPLGSGNMVSSNGALGSVPSASEITKRNILGADERLGSSGIVQPLVSPLSSRAILPQAAKGNDGTSSIDSSNVNEAAAVSGRVFSPPLVPGMQWRPGSPFQNQNEMGQIRGRAEIAPDQREKFLQKFQQVQQGHSTLLGMPSLAGGNHRQFSAHQQNPLLQQLNSQGSSVSSQSCLGLGVQAPGFNSISSTSLQLTPNSIHNPSNQQQLISGVSKDADVSNAEVEEQQQQNFPDEGATESTASTGTGKNLINEDDLKSTYIVDSPAGLSGSLPEPAPTSRDTDLSLGQPLQPNQPSGNLGVIGRRTGADLGAIGDNFSGPSVNSGGMRDQLYNLQMLEAAYYKLPQPKDSECPRTYTSRHPIITPPSFPEAQAPIVNNPAFWERISLEPFGTDTLFFAFYYQQNTYQQYLAAKELKQQSWRYHRKYNTWFQRHEEPKVATDECEQGTYVYFDFHIANDDPQHGWCQRIKTEFTFEYNYLEDELIV 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2834 891 MobiDBLite consensus disorder prediction 617 705 - -
Bisa07g2834 891 Pfam NOT2 / NOT3 / NOT5 family 747 885 IPR007282 GO:0006355
Bisa07g2834 891 MobiDBLite consensus disorder prediction 111 131 - -
Bisa07g2834 891 Coils Coil 41 61 - -
Bisa07g2834 891 Coils Coil 132 159 - -
Bisa07g2834 891 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Bisa07g2834 891 MobiDBLite consensus disorder prediction 343 371 - -
Bisa07g2834 891 Gene3D - 731 886 IPR038635 -
Bisa07g2834 891 MobiDBLite consensus disorder prediction 629 659 - -
Bisa07g2834 891 PIRSF NOT_su_3_5 1 891 IPR012270 GO:0006355|GO:0030015
Bisa07g2834 891 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 731 886 - -
Bisa07g2834 891 PANTHER CCR4 NOT-RELATED 24 888 IPR040168 GO:0030015
Bisa07g2834 891 MobiDBLite consensus disorder prediction 343 385 - -
Bisa07g2834 891 MobiDBLite consensus disorder prediction 272 311 - -
Bisa07g2834 891 MobiDBLite consensus disorder prediction 681 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2834 Bisa-ChrBisa07 61003471 61019331 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2658 03 40929176 40939491 Bisa07g2834 07 61003471 61019331 CCT