Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2658 ATGGGTGCGAGTCGGAAGCTTCAGGGTGAGATAGATCGTGTTCTGAAGAAGGTCCAAGAAGGCGTTGAAGTCTTTGATAGTATTTGGAACAAGGTTTACGATACAGACAATGCGAACCAGAAGGAGAAATTTGAGGCAGACCTGAAAAAGGAGATTAAGAAGCTCCAGAGGTACAGAGACCAAATTAAGACTTGGATTCAGTCTAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCTCTAGTGGATGCTCGCAAGCTCATTGAGCGTGAAATGGAAAGATTTAAGATCTGTGAAAAGGAAACTAAGACCAAAGCATTCTCCAAAGAAGGCCTTGGCCAACAGCCTAAAACTGATCCCAAGGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAACTTTGAAGCTGAGCTTGAAGGGCTTTCTGTTAAAAAAGGAAAGAGCAGGCCACCTAGATTGACTCATCTAGAGACATCAATTACTCGACACAAGGCTCACATAAAGAAATGTGAATTACTCTTGAGGCTACTGGATAACGATGAATTAAGTCCTGAGCAAGTTAATGATGCCAAAGATTTCTTAGAGGACTATGTGGAGCGTAATCAGGAGGACTTTGATGAATTCAGTGATGTTGATGAGCTATACAGTTCATTACCTTTAGACAAGGTGGAGTCGCTAGAAGATCTTGTCACAATTGGTCCCCCTGCTACTTCTAAGGGTGCACCTGGTCTTAGCTTGAAGACTTCTTTGGCTTCATCAGCATCAGCTTCACAAGAGCAAGCTGATGACACAACTTCCCAGGATAGCAATTCTGATACTGTTGCTAGAACCCCACCTTCTAAAAGTAGTGGAATTAGTTCTGCTACTTCAACACCAGCTGGTAACCATGCTACTCCTGTTTCTTTGAATGTTTCAGTTCATAACTTATCCGGTCCACCAGCTACTGCATCAGCCCTCCCTGGCTCAAATGCTGTTCGGAGTGCTTTAGAGAATTCTGGTGCTGCTAATTCTTCGTCGTCCGTAAATCAGTCTACCTCTATAAAAGAAGAAGAGGCTAATAGCTTCCCTGGCCGGAGAGCATCTCCATTGCTTTCTGATGCTGCACACATGAGAGGCATCAGTAGAAACAGCCTGTCAAATCAAGTAACATCTGGTATCCCTCTTGGTTCTGGCAATCTTGTTTCCAGCAATGGGGCCCTTGGCTCAGTCCCTTCTGCTTCTGAAATAACTAAGAGAAACATAGTGGGAGCTGATGATAGGATCGGAAGTAGTGGGATAGTGCCGCCTCTTCTATCTCCCTTAAGTAATAGAATGATGTTGTCTCAGGCTGTGAAGGCTAATGATGGAACTGGCTCAGTTGACTCTAGTAATGTTAATGAGGCTGCAGCTGTATCTGGAAGAGTATTTTCCCCTTCTGGGGTTCCTGGCATGCAATGGAGACCTGGAAGTCCTTTCCAGAACCAGAATGAGACGGGGCAGCTCCGTGGAAGAACTGAAATAGCTCCAGATCAGAGAGAGAAGTTTCTGCAGAAGTTTCAGCAAGTGCAGCAACAAGGGCACAGTACCCTTCTTAGTATGCCTTCCCTTGCTGGAGGAAATCATAAGCAGTTTTCTACTCAACAGCAAAACCCTCTATTGCAGCAGGCACCAGGTCTCAGTAGTATTTCGTCCGCTTCATTACAGCAACCATCCAATTCTATTCTTTCTCCGTCTAGCCAACAGCCATTGATGACAAGTGCTTCTAAAGATGCTGATGTTGGAAATTCTAAAGTTGAAGAGCATCAGCAACAGCAGAATTTTCCTGAAGATTCAGTGACTGAATCTACTGCCAGTACTGGGCTTGGCAAGAATCTTTTAAGTGAGGATGATTTGAAATCCACATATGCTGTAGATTCTCCTCAGGCTGGAGCATCTGGCTCTCTTTCAGAGCCTGCTCAGAGCTCTGGAGATCCTGATTTCTCTCCTGGCCAACCTTTACAATCCAACCAAAGTTCTGGAAACCTTGGTGTCATTGGAAGAAGAAGTGTTGCCGACCTTGGGGCCATTGGTGATAATTTTAGTGGACCCAGTGTTAATTCCAGTGGAGTGCGTGACCAATTATTTAATTTGCAGATGCTTGAGGCAGCTCACTACAAACTTCCACAACCTAAAGACTCGGAACGTCCAAGGACTTATACTCCTAGGCACCCAACTATAACACCTCCTAGTTATCCTCAAGTACAAGCCCCCATTGTCAGTAATCCTGCCTTTTGGGAGAGAGTGGGTCTTGAACCATATGGCACTGATACCCTGTTCTTTGCATTTTATTATCAACAGAATACTTATCAACAATATTTGGCTGCAAAGGAACTAAAGAAGCAGTCTTGGAGATATCACAGAAAATACAACACATGGTTTCAGCGGCATGAAGAGCCAAAAGTTGCTACAGATGAATATGAGCAGGGTACATATGTATACTTCGATTTTCATATTGCAAATGACGACCTACAACATGGGTGGTGTCAAAGAATCAAGACCGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTCTTGTATAG 2610 0.4387 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKSRPPRLTHLETSITRHKAHIKKCELLLRLLDNDELSPEQVNDAKDFLEDYVERNQEDFDEFSDVDELYSSLPLDKVESLEDLVTIGPPATSKGAPGLSLKTSLASSASASQEQADDTTSQDSNSDTVARTPPSKSSGISSATSTPAGNHATPVSLNVSVHNLSGPPATASALPGSNAVRSALENSGAANSSSSVNQSTSIKEEEANSFPGRRASPLLSDAAHMRGISRNSLSNQVTSGIPLGSGNLVSSNGALGSVPSASEITKRNIVGADDRIGSSGIVPPLLSPLSNRMMLSQAVKANDGTGSVDSSNVNEAAAVSGRVFSPSGVPGMQWRPGSPFQNQNETGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLSMPSLAGGNHKQFSTQQQNPLLQQAPGLSSISSASLQQPSNSILSPSSQQPLMTSASKDADVGNSKVEEHQQQQNFPEDSVTESTASTGLGKNLLSEDDLKSTYAVDSPQAGASGSLSEPAQSSGDPDFSPGQPLQSNQSSGNLGVIGRRSVADLGAIGDNFSGPSVNSSGVRDQLFNLQMLEAAHYKLPQPKDSERPRTYTPRHPTITPPSYPQVQAPIVSNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELLV 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2658 869 MobiDBLite consensus disorder prediction 646 683 - -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 344 366 - -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 730 754 - -
Bisa03g2658 869 Coils Coil 41 61 - -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 565 631 - -
Bisa03g2658 869 Coils Coil 132 159 - -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 110 131 - -
Bisa03g2658 869 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Bisa03g2658 869 Gene3D - 708 864 IPR038635 -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 487 508 - -
Bisa03g2658 869 Pfam NOT2 / NOT3 / NOT5 family 726 863 IPR007282 GO:0006355
Bisa03g2658 869 MobiDBLite consensus disorder prediction 645 683 - -
Bisa03g2658 869 PIRSF NOT_su_3_5 1 869 IPR012270 GO:0006355|GO:0030015
Bisa03g2658 869 MobiDBLite consensus disorder prediction 248 321 - -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 565 633 - -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 257 321 - -
Bisa03g2658 869 PANTHER CCR4 NOT-RELATED 24 866 IPR040168 GO:0030015
Bisa03g2658 869 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 709 864 - -
Bisa03g2658 869 MobiDBLite consensus disorder prediction 344 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2658 Bisa-ChrBisa03 40929176 40939491 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2658 03 40929176 40939491 Bisa07g2834 07 61003471 61019331 CCT
Bisa03g2658 03 40929176 40939491 Bisa03g2658 03 40929176 40939491 ECH