Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g2110 ATGGAGTCTCTAGCTAAACTCCACCACTCTCACCAACCGCTTCGTCTTTCACTCAATCAGATCCCTTCTTCATTATCAAGACCCTTATCATCCGTCTCCTTCAGGTCTGTCCCACCACCGCCTTCAGCACCGCAATTTTCGTCTTCATCCCTCAGGTTATCATCTATTAGAGCGGCATCCTCCTCGTCAGGCTCATCCCCTGAGCCTGCAGCCCATTTGCTCCAAACCCTAAACCCCTTTTCCTCTACTGTCGTCCAAACCACCTGTACCATCATCGCAGCAGCTGCAATATTCTTCTTGCGTTTGCCTCTCAAGCCCGCCATTGCAGGCCCTGTTGTGCCGCCCACGGTGGAGTCTGTTACGGAGTCGATGGAAAATTCTAGGAATGAAGAAAATGAGAGAACTATTGAAGAGCAATTAAGCAGCAATCCCAACGATACCGATGCTCTTCGGTCTCTCATCGAGGTCAAGATCAAAGCGCACAAACTCGAGGAGGCAATTCAGGTTATAGACCGTTTGATTGAACTCGAACCTGAAGAATTTGAGTGGCCACTGCTGAAGGCTCATATGTATATCTATAACGGTGACTATGAATCGGCCAAAGAGAAGTTCGAAGATATTATAAAGAAGGATCCCTATCGTGTCGAAGCCTATCATGGCCTTGTAATGGCTACTTCGGAGTCGGATAAGCCATTGGAGGATTTGTTGAAGAGGATTGAAGGTGCAATGGAAATGTGCAAAAAACAAAAGCGTGAATCAGATGTCCGGGATTTAAAGCTCTTGATTGCGCAAATTAAAGTCATGGAGGGAGACTTTCCTGATGCGCTAAGGGCCTATCAGGAGCTTGTAAAGGAAGAACCAAGAGATTTCAGGCCGTACTTATGTCAGGGTATCATTTATACTCTTCTGAGGAAGAAAGATGAAGCCGAGAAACAATTCGACAAGTTCCGGAGGCTTATCCCCAAGAACCATCCTTATAGAGAGTATTTTGAGGACAATATGTTTGCAACGAAGTTTTTCCCACAGAATGTAGAGAGGGAGGGAGCAAGTGCGAGGAGCTGA 1062 0.4652 MESLAKLHHSHQPLRLSLNQIPSSLSRPLSSVSFRSVPPPPSAPQFSSSSLRLSSIRAASSSSGSSPEPAAHLLQTLNPFSSTVVQTTCTIIAAAAIFFLRLPLKPAIAGPVVPPTVESVTESMENSRNEENERTIEEQLSSNPNDTDALRSLIEVKIKAHKLEEAIQVIDRLIELEPEEFEWPLLKAHMYIYNGDYESAKEKFEDIIKKDPYRVEAYHGLVMATSESDKPLEDLLKRIEGAMEMCKKQKRESDVRDLKLLIAQIKVMEGDFPDALRAYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFDKFRRLIPKNHPYREYFEDNMFATKFFPQNVEREGASARS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g2110 353 SMART tpr_5 290 323 IPR019734 GO:0005515
Bisa07g2110 353 SMART tpr_5 256 289 IPR019734 GO:0005515
Bisa07g2110 353 SMART tpr_5 147 180 IPR019734 GO:0005515
Bisa07g2110 353 SMART tpr_5 181 214 IPR019734 GO:0005515
Bisa07g2110 353 ProSiteProfiles TPR repeat profile. 147 180 IPR019734 GO:0005515
Bisa07g2110 353 PANTHER CELLULOSE SYNTHASE OPERON PROTEIN C 122 220 - -
Bisa07g2110 353 SUPERFAMILY TPR-like 140 327 IPR011990 GO:0005515
Bisa07g2110 353 Coils Coil 232 252 - -
Bisa07g2110 353 MobiDBLite consensus disorder prediction 119 144 - -
Bisa07g2110 353 Pfam Tetratricopeptide repeat 265 321 - -
Bisa07g2110 353 Gene3D Tetratricopeptide repeat domain 114 334 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g2110 Bisa-ChrBisa07 49677598 49678659 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0737 03 9881920 9890066 Bisa07g2110 07 49677598 49678659 CCT
Bisa07g2110 07 49677598 49678659 Bisa07g2110 07 49677598 49678659 ECH