Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0737 ATGGAAGACTGCTCGTCCCCTGCTTCTTATATCCGACTGGTGCACCGTCTAATTGAGGAGTGTATGCTATTCAAGATGAGCAAAGAGGAATGCATGGAAGCTCTGTCCAAACATGCAAATATCAAACCAATAATTACATCCACTGTGTGGAAGGAATTAGAGAAAGAGAACAAGGAGTTCTTCGAGGCATACTTGAGAAACAGAGCCGAGACTGAGAGAGGGTCTGAGACAGAGACAAGGCAAGGCATACCAGAGCGGCTTCTGAATCTTCCTCCTCTCGACCGAGTTCAGGACTTGGACGCAAACAACGGTTTTAGGCAGCCTCCTGCTCTACCCTATCTTCTCAAATTCTCAATCTCGTTGCTTCATTTCTCTCAGGCTTCACCCATGGAGTCTCTTACTAAATTGCGTCACTCTCGTCTGCCTTTGCACCGATCTACCAGTCGCCACCGTTCGTCAATCCCAAGGCCAGTATCTTCGCTCTCCTTCAGGTCTCTACCACCACCGGCTTCGCCCCTGCAATTCTCGTCCTCGTCGTTCAGAATATCATCTATCAGAGCCTCTTCCTCGTCTTCAGCCTCGTCAACCGACCCTTCATTTCATAAACCTAGAGACATTGTGACCCGTCTGGTTGAAACCCTAAATCCCCTTTTGTCGCCCGTTGCTGAAACTACTTGCATTGTTATAGCCGCAACTGCATTTTTCTTCATGCGTTTTCAGCACATGCCTGTTATTGCAGCACCGGTTGCGCCGCGCATGGTGGAGTCCACTGAACAGTTGACCGATAATCTTTCGTATGAAGAAAAGGAGAAACTTATTGAAGAGAAATTGAGCAACAATCCCAATGATACCGAAGCTCTTAGGTCTCTAATGGAGGTTAAGATCGGAGCGCGTAAAATTGAAGAAGCGATTCAGGTTATTGACCGTTTGATTGAACTAGAACCCCAAGATTTTGAGTGGCCACTGATGAAGGCTCACATGTATATCTATAATGGTAACTACCAAGTGGCCAAAAATGGGTTCGAGCATATTCTGAAGAAAGATCCGTATCATGTTGAAGCATTTCATGGCCTTGCAATGGCAATGTCGGAATCAAATGAGCCATTGGAGGGTTTGGTGAAGAGGATTGAGGACGCAGTATATGTTTGCAAAAAGGAAAAGAGGAACTCAGATGCCAGAGACTTAAGGCTATTGGTTGCGCTGATTAAAGTCATGGAAGGATCCTTTACGGATGCGTTGAAGGCCTATCAGGAACTTGTAAAGGAAGAACCAAGAGATTTTAGGCCGTACTTATGTCAGGGTATCATATATACTCTGCTAAAAAAGAAAGATGAAGCGGAGAAACAATTTGAAAAGTTCCGGGTGCTTGTCCCAAAGGATCACCCTTATAAAGAGTATTTAGAGGATAACATGTTTGCAACGAGGTTTTTCTCACAGAAGTTTGAGCGGGAAGGAGCTGGTGCAAGAAATTGA 1473 0.4528 MEDCSSPASYIRLVHRLIEECMLFKMSKEECMEALSKHANIKPIITSTVWKELEKENKEFFEAYLRNRAETERGSETETRQGIPERLLNLPPLDRVQDLDANNGFRQPPALPYLLKFSISLLHFSQASPMESLTKLRHSRLPLHRSTSRHRSSIPRPVSSLSFRSLPPPASPLQFSSSSFRISSIRASSSSSASSTDPSFHKPRDIVTRLVETLNPLLSPVAETTCIVIAATAFFFMRFQHMPVIAAPVAPRMVESTEQLTDNLSYEEKEKLIEEKLSNNPNDTEALRSLMEVKIGARKIEEAIQVIDRLIELEPQDFEWPLMKAHMYIYNGNYQVAKNGFEHILKKDPYHVEAFHGLAMAMSESNEPLEGLVKRIEDAVYVCKKEKRNSDARDLRLLVALIKVMEGSFTDALKAYQELVKEEPRDFRPYLCQGIIYTLLKKKDEAEKQFEKFRVLVPKDHPYKEYLEDNMFATRFFSQKFEREGAGARN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0737 490 Gene3D Tetratricopeptide repeat domain 248 475 IPR011990 GO:0005515
Bisa03g0737 490 MobiDBLite consensus disorder prediction 142 167 - -
Bisa03g0737 490 ProSiteProfiles TPR repeat profile. 284 317 IPR019734 GO:0005515
Bisa03g0737 490 MobiDBLite consensus disorder prediction 152 167 - -
Bisa03g0737 490 PANTHER OS02G0137100 PROTEIN 5 215 IPR006476 -
Bisa03g0737 490 Pfam Plant protein 1589 of unknown function (A_thal_3526) 14 64 IPR006476 -
Bisa03g0737 490 SUPERFAMILY TPR-like 273 463 IPR011990 GO:0005515
Bisa03g0737 490 NCBIfam TIGR01589 domain 11 64 IPR006476 -
Bisa03g0737 490 SMART tpr_5 427 460 IPR019734 GO:0005515
Bisa03g0737 490 SMART tpr_5 393 426 IPR019734 GO:0005515
Bisa03g0737 490 SMART tpr_5 284 317 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0737 Bisa-ChrBisa03 9881920 9890066 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0737 03 9881920 9890066 Bisa07g2110 07 49677598 49678659 CCT