Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1802 ATGAACCAAAGTATATTCAGGTGTGGCATTGTTCGGTACGCTATTGTTTTAGTGTGTTTGATACATATACAATGTGATTCGCAAGTGAGTGCCATACTGGACCCGGTTGATTTCTTGGCTCTACAATCTATTCACAAGGCTTTAAAGGATGTGCCAGGATCAAATTTTCTTTCTTCGTGGGATTTCACTTCAGACCCGTGTAATTTCAATGGCGTTTACTGTAATTCCGATAAAGTCATTGCCCTCAATCTCGGTGATCCCAGTGCCGGTGCTCCCGGTCTGACCGGCAAACTCGACCCGGCCATCGGTAAGCTCTCTGCTTTGGCTGAGCTCACGGTGGTGCCAGGTAGAATATACGGTCCTCTGCCCCAGTCGTTGTCTAACTTGAACAACCTTAGATTTCTCGGCATTAGTCGAAACTTCATTTCTGGCCAGATTCCGGCGACTTTGGGTCAATTGCGAAATCTGAGAACCTTAGACCTCAGCTTCAACCAGCTAACTGGAAGCATTCCTCCGTCCATTGGAGCCTTACCAGGGCTAAACAATGCGATCCTCTCCCACAATCACCTCTCCGGTTCGGTCCCCTCGTTCGCATCACAGACACTAACCCGGCTCGACCTGAAGCACAATGGCCTCTCCGGTTCACTGCCTCCCAATTCTCTCCCTCCCTCTCTGCAATACCTGTCTCTATCGTGGAACCAGCTGAGTGGGCCAGTGGATCGGCTTTTGAACCGAATGGACCGGTTGACATACCTGGACCTTAGCCTCAACCAGTTCTCGGGCAAAATTCCGGGTCGAATCTTCTCATTTTCCCTCACCAATCTGCAACTAGAAAGGAATCAGTTTTCGGGCGTGGTGCAACCAGTTGATCAGGTGAGAATCCCAACCGTTGATCTGAGCTACAACAGATTGTCCGGTCAAGTATCGCCGATGTTCTCGACCGTACAGAAACTGTACCTGAACAACAACCGGTTCACGGGTCAGGTTCCGAGTAGTTTCGCGGAGAGGCTATTGGACGCAACCATACAGATATTATATATACAGCACAATTATCTGACGGGGATAGCGATCAGTCCAACGGCTGAGATTCCTCTAAGCAGCTCACTGTGTTTACAGTATAATTGTATGGTCCCACCCGTAGAGTCAACGTGTCCCTTGAAGGCTGGGAAGCAGAAGACGAGGCCTATTTCGCAGTGCAGAGAGTGGAGGGGATAA 1215 0.4947 MNQSIFRCGIVRYAIVLVCLIHIQCDSQVSAILDPVDFLALQSIHKALKDVPGSNFLSSWDFTSDPCNFNGVYCNSDKVIALNLGDPSAGAPGLTGKLDPAIGKLSALAELTVVPGRIYGPLPQSLSNLNNLRFLGISRNFISGQIPATLGQLRNLRTLDLSFNQLTGSIPPSIGALPGLNNAILSHNHLSGSVPSFASQTLTRLDLKHNGLSGSLPPNSLPPSLQYLSLSWNQLSGPVDRLLNRMDRLTYLDLSLNQFSGKIPGRIFSFSLTNLQLERNQFSGVVQPVDQVRIPTVDLSYNRLSGQVSPMFSTVQKLYLNNNRFTGQVPSSFAERLLDATIQILYIQHNYLTGIAISPTAEIPLSSSLCLQYNCMVPPVESTCPLKAGKQKTRPISQCREWRG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1802 404 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 16 404 - -
Bisa07g1802 404 Pfam Leucine Rich repeat 223 237 IPR001611 GO:0005515
Bisa07g1802 404 Pfam Leucine Rich repeat 199 214 IPR001611 GO:0005515
Bisa07g1802 404 Pfam Leucine Rich Repeat 155 177 IPR001611 GO:0005515
Bisa07g1802 404 SUPERFAMILY L domain-like 37 376 - -
Bisa07g1802 404 FunFam Nuclear pore complex protein NUP107 36 196 - -
Bisa07g1802 404 Gene3D Ribonuclease Inhibitor 200 383 IPR032675 -
Bisa07g1802 404 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Bisa07g1802 404 SMART LRR_typ_2 153 177 IPR003591 -
Bisa07g1802 404 SMART LRR_typ_2 246 270 IPR003591 -
Bisa07g1802 404 Gene3D Ribonuclease Inhibitor 37 199 IPR032675 -
Bisa07g1802 404 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1802 Bisa-ChrBisa07 44523621 44524835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1802 40 354 Receptor kinase-like Gene Family AT5G62230 31.325 2.32e-37 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0418 03 5280153 5281388 Bisa07g1802 07 44523621 44524835 CCT
Bisa07g1802 07 44523621 44524835 Bisa07g1802 07 44523621 44524835 ECH