Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0418 ATGGCGCGGCCAAGGGAAGCCAGGCGTGGCATTGGTTCCTGCTCCTGTTCCTGTTCCTGTATGCTGCTTTTGATGTGTTTGATACAGATGCAATGTCATTTCCATGTGCTTGCCATGTTGGACCCTGTTGATTTTTTGGCTCTTCAATCCGTTCGCAAGTCTCTCCAGGATATGCCTGGCTCCAGTTTCTTTGCTTCTTGGGATTTCACTGCCGACCCCTGCAATTTCGACGGCGTCTATTGTGATTCCGACAGGGTTATCGCCCTCAATCTTGGGGATTCCAGAGCCGGTTCTCCGGGTCTAACGGGCAGGCTCGATCCGGCCATCGGGAAGCTATCCGCTCTCGCCGAGTTCACGGTTGTGCCCGGTAGGATATATGGTTCCTTGCCTAATTCGCTGTCTAATTTGAAGAACTTAAGATTTATTGGAGTCAGCCGGAACTTCATTTCCGGTGAGATCCCGGCGGACTTGGCCGGGTTGCGCAATCTCCGAACCCTCGATCTCAGCTACAATCAGCTCACCGGACACATTCCTCCATCCATCGGAGCCTTGCCGGCGCTAAACAACTTGATCCTCTGCCACAACCGCCTCTCCGGTTCGGTCCCCTCCTTTTCGTCACCCACCCTAACCCGGCTCGACCTAAAGCATAACAGTCTCACCGGTTCGCTCGGTCCCAATTCTCTGCCTCCCTCCCTCCAATACCTCTCTCTAGCCTGGAACAATCTCACCGGTCCAGTGGATCGGCTCTTGAACCGCATGAACCAGTTGAACTACCTGGACCTTAGCCTGAACCGGTTCACAGGCTTCATTCCATCTGGCATCTTCTCATTTCCACTCACCAACCTCCAATTGGAAAGGAACCAGTTTTCCGGTCCGGTCCAACCGGTCAATCAGGTCACAATCCCGACCGTTGATCTCAGCCACAACGGGTTTTCGGGCCAAATATCACCCTTGTTTTCGACCGTTGAGAGCCTATACCTCAACAACAACCGGTTCTCGGGTCGGGTCCCAAGCAACTTCGTGGACCGACTTTTGGCTGCTAGGATACAAATACTGTATTTGCAGCACAACTATCTTACAGGCATTGAGATTAGTCCAACGGCTGAGATTCCAGAGAGAAGCTCGCTGTGTCTCCAGTATAACTGCATGGTCCCGCCCATACAGACGCCCTGCCCTTTGAGGTCTGGGAAACAGATAACGAGGCCTACTGCACAATGCAACGAATGGAGGGGGTAA 1236 0.5299 MARPREARRGIGSCSCSCSCMLLLMCLIQMQCHFHVLAMLDPVDFLALQSVRKSLQDMPGSSFFASWDFTADPCNFDGVYCDSDRVIALNLGDSRAGSPGLTGRLDPAIGKLSALAEFTVVPGRIYGSLPNSLSNLKNLRFIGVSRNFISGEIPADLAGLRNLRTLDLSYNQLTGHIPPSIGALPALNNLILCHNRLSGSVPSFSSPTLTRLDLKHNSLTGSLGPNSLPPSLQYLSLAWNNLTGPVDRLLNRMNQLNYLDLSLNRFTGFIPSGIFSFPLTNLQLERNQFSGPVQPVNQVTIPTVDLSHNGFSGQISPLFSTVESLYLNNNRFSGRVPSNFVDRLLAARIQILYLQHNYLTGIEISPTAEIPERSSLCLQYNCMVPPIQTPCPLRSGKQITRPTAQCNEWRG 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0418 411 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 18 411 - -
Bisa03g0418 411 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Bisa03g0418 411 Gene3D Ribonuclease Inhibitor 44 206 IPR032675 -
Bisa03g0418 411 Pfam Leucine Rich Repeat 162 184 IPR001611 GO:0005515
Bisa03g0418 411 SMART LRR_typ_2 253 277 IPR003591 -
Bisa03g0418 411 SMART LRR_typ_2 160 184 IPR003591 -
Bisa03g0418 411 SUPERFAMILY L domain-like 51 389 - -
Bisa03g0418 411 Gene3D Ribonuclease Inhibitor 207 390 IPR032675 -
Bisa03g0418 411 Pfam Leucine Rich repeat 206 221 IPR001611 GO:0005515
Bisa03g0418 411 FunFam Nuclear pore complex protein NUP107 42 203 - -
Bisa03g0418 411 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0418 Bisa-ChrBisa03 5280153 5281388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0418 29 361 Receptor kinase-like Gene Family AT5G62230 30.878 7.07e-36 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0418 03 5280153 5281388 Bisa07g1802 07 44523621 44524835 CCT
Bisa03g0418 03 5280153 5281388 Bisa03g0418 03 5280153 5281388 ECH