Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1793 ATGTCAGGGCTTGTGACGGTGAAGGGCGATGGTGGCAAGGGAGGCAGAGCAGCAAAGACGCCCCAACAAGACAGAGACAACAACAATTCCCTCGTCCCTCTTCTCTTGGCCGCTTTGAGGAAGTCAATGGTGTCGTGTCGGGTGGATACACCCGACGATGTAATCTCCGCCGTCCCTCACTTTGAGACCGGGTGGCCCACCGACGTTCAGCACATCACCCACGTCACTTTCGATCGCTTCCATGGCTTTCTTGGTCTTCCTGCGGAGCTCCAGCTCGAAGTGCCGGGTCGGGTTCCAAGCGCTAGCGTAAGTGTGTTTGGCGTGTCAGCAGAATCAATGCAGTGCTCTTATGATTCAAAAGGGAATAGCATTCCAACTATTCTGTTGTTAATGCAGGAGCGTTTATACTCACAGGGAGGCCTAAAGGCCGAAGGAATATTTCGCATAAACCCAGAAAACAGTGAAGAGGAGAAGGTGAGGGAGAAGTTGAACAGAGGGATTGTGCCAGACGACATAGATGTGCATTGTTTAGCAGGCCTAATTAAAGCGTGGTTCCGAGAGCTTCCTTCAGGAATTCTAGATGGACTTTCTCCAGAGCAAGTTCTGGAGTGCAACTCAGAACAAGAATATGTTGAGCTTCTGAAGCAACTAGAGCCCACTGAAGCTGCCCTGCTCAATTGGGCCGTTGATCTCATGGCTGATGTCGTTGAACACGAAGAACACAACAAAATGAATGCCAGAAATATCGCCATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCACTGACGGCTCTGATGCATGCGGTCCAAGTGATGAACTTACTCAAGACCCTGATAACCAAGACACTCGAAGAACGTGAAGAAACGACAGAAACAGGATATTCATCCATGTCGTTTCATTCCTCTGAGGATGAATATGAAAGTGACGAAGAAATGGATGCTAGTGGCGGTGAAGATGAAGAGGAATATGAGATCTCATTTACTGATTGCAGAACTGGCAAGTCTTTCTCCAGTTCTCCATTTGAAGAGAAGTCTGTGAGATCAAATGCTGACTTAACTAGTCCATCAATAGAATTTGCAGGGACCGATGATGTAGAGATGATGGATGAATTAACAGATTCTATTTCACCGGTGCTACTGTTAGCATCTAGCTAA 1161 0.4746 MSGLVTVKGDGGKGGRAAKTPQQDRDNNNSLVPLLLAALRKSMVSCRVDTPDDVISAVPHFETGWPTDVQHITHVTFDRFHGFLGLPAELQLEVPGRVPSASVSVFGVSAESMQCSYDSKGNSIPTILLLMQERLYSQGGLKAEGIFRINPENSEEEKVREKLNRGIVPDDIDVHCLAGLIKAWFRELPSGILDGLSPEQVLECNSEQEYVELLKQLEPTEAALLNWAVDLMADVVEHEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLITKTLEEREETTETGYSSMSFHSSEDEYESDEEMDASGGEDEEEYEISFTDCRTGKSFSSSPFEEKSVRSNADLTSPSIEFAGTDDVEMMDELTDSISPVLLLASS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1793 386 PANTHER MKIAA1688 PROTEIN 22 340 IPR044785 GO:0005096
Bisa07g1793 386 Gene3D Rho GTPase activation protein 96 293 IPR008936 -
Bisa07g1793 386 CDD CRIB 62 101 - -
Bisa07g1793 386 SUPERFAMILY GTPase activation domain, GAP 104 282 IPR008936 -
Bisa07g1793 386 MobiDBLite consensus disorder prediction 332 358 - -
Bisa07g1793 386 MobiDBLite consensus disorder prediction 287 359 - -
Bisa07g1793 386 FunFam Rho GTPase-activating protein 5 93 286 - -
Bisa07g1793 386 ProSiteProfiles Rho GTPase-activating proteins domain profile. 108 288 IPR000198 GO:0007165
Bisa07g1793 386 CDD RhoGAP 125 281 - -
Bisa07g1793 386 MobiDBLite consensus disorder prediction 1 28 - -
Bisa07g1793 386 SMART RhoGAP_3 122 285 IPR000198 GO:0007165
Bisa07g1793 386 Pfam RhoGAP domain 125 259 IPR000198 GO:0007165
Bisa07g1793 386 SMART PBD_5 63 97 IPR000095 -
Bisa07g1793 386 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1793 Bisa-ChrBisa07 44424446 44426288 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0405 03 5107052 5109211 Bisa07g1793 07 44424446 44426288 CCT
Bisa07g1793 07 44424446 44426288 Bisa07g1793 07 44424446 44426288 ECH