Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0405 ATGGTGACGAAGGGCGGAGGGAAGGGAACGAAGGGAAGAAGAACCTCGGCCGAAGAAGAGCAGAACCAGCTGTCTCTGGTGGCATTCCTGTTGGCCGCCTTGAGGAAATCTATGGTAGCTTGCCGGGTGGATCGACCCGACGATGTCATCTCCACCGTTCATCAAATGGAAATCGGGTGGCCCACCAACGTTCAGCATATCACTCATGTCACTTTCGATCGCTTCAACGGATTTCTGGGCCTTCCAGTCGAGTTCGAGGTCGAGATCCCGGGTCGGGTTCCCAGCGCTAGTGTAAGTGTGTTTGGCGTCTCAGCAGAATCAATGCAGTGTTCTTATGATTCAAAAGGAAATAGTGTTCCCACTATTCTCTTGCTAATGCAGGAACGTTTATACTCACAGGGAGGCCTAAAGCGTGAAGGAATATTTCGCATAAACCCGGAAAACAGTCAAGAGGAGCACCTGAGGGATCAGTTGAATAGGGGGATTGTGCCAGATGACATTGACGTGCACTGCTTGGCAGGCCTAATTAAAGCATGGTTCCGAGAGCTTCCTTCAGGGGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAACCAACTGAAGCCGCCTTGCTCAACTGGGCCATTGATCTCATGGCTGATGTTGTAGAGGAGGAGGAATACAACAAAATGAACGCAAGAAATATAGCAATGGTTTTTGCTCCAAACATGACCCAGATGTCTGATCCATTAACGGCTCTGATGCATGCGGTTCAAGTGATGAACTTGCTCAAGACCCTCATAATGAAGACCCTTAGAGAACGCGAAGAAACAACAACGGGGGGATATTCACCCATGTCATTTCGTTCATCAGATGGGGCATCAGAGGATGGATATGACAGTCAGCACGAAATGGAGACCAGTGGTGAACTGAGAGGGAACAAGTCAGATTATGATGATCATGTTCACTACAGCCATTGCAGTGAAGAGGAAGGTGGGGCCGAATCTTTAAGTGAGATAGAGGAATGCTTCTTGAACCAGTTGGATGAGAACACAAAAGGATACTCACAAGAACCTGCAGGGTATTTGCAAGAGGATTATGCCAGCCCTACTACTCGCTCTGGCTATAACATGGAATCTGCTATTTCATTTACTGACAGCAAAACTGGGAATGCCTACTTGAGTTCCACTAATGGTGAAAAGTCACTGACAGATCAGATTGCTGCAGGATCAAATGTTGACGCTGGTAGTCCATCAATAGGATGTACAGGCAGTATTGAAGTGGAGATGATGGATAAATATAAAGATCCTGTTCCGCGAGTGCCATTGTTTCAATCCAATTAG 1368 0.4722 MVTKGGGKGTKGRRTSAEEEQNQLSLVAFLLAALRKSMVACRVDRPDDVISTVHQMEIGWPTNVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKREGIFRINPENSQEEHLRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEAALLNWAIDLMADVVEEEEYNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETTTGGYSPMSFRSSDGASEDGYDSQHEMETSGELRGNKSDYDDHVHYSHCSEEEGGAESLSEIEECFLNQLDENTKGYSQEPAGYLQEDYASPTTRSGYNMESAISFTDSKTGNAYLSSTNGEKSLTDQIAAGSNVDAGSPSIGCTGSIEVEMMDKYKDPVPRVPLFQSN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0405 455 PANTHER MKIAA1688 PROTEIN 15 353 IPR044785 GO:0005096
Bisa03g0405 455 Pfam P21-Rho-binding domain 57 86 IPR000095 -
Bisa03g0405 455 SMART PBD_5 58 92 IPR000095 -
Bisa03g0405 455 MobiDBLite consensus disorder prediction 286 303 - -
Bisa03g0405 455 MobiDBLite consensus disorder prediction 304 325 - -
Bisa03g0405 455 CDD RhoGAP 120 276 - -
Bisa03g0405 455 SMART RhoGAP_3 117 280 IPR000198 GO:0007165
Bisa03g0405 455 ProSiteProfiles CRIB domain profile. 58 71 IPR000095 -
Bisa03g0405 455 Gene3D Rho GTPase activation protein 90 284 IPR008936 -
Bisa03g0405 455 MobiDBLite consensus disorder prediction 284 325 - -
Bisa03g0405 455 SUPERFAMILY GTPase activation domain, GAP 99 277 IPR008936 -
Bisa03g0405 455 Gene3D CRIB domain 53 89 IPR036936 -
Bisa03g0405 455 ProSiteProfiles Rho GTPase-activating proteins domain profile. 103 284 IPR000198 GO:0007165
Bisa03g0405 455 Pfam RhoGAP domain 120 254 IPR000198 GO:0007165
Bisa03g0405 455 FunFam Rho GTPase-activating protein 5 88 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0405 Bisa-ChrBisa03 5107052 5109211 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0405 03 5107052 5109211 Bisa07g1793 07 44424446 44426288 CCT
Bisa03g0405 03 5107052 5109211 Bisa03g0405 03 5107052 5109211 ECH