Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1681 ATGATTGGTGGGCCGCCAGAAGGAGTAGTGACCTGGCAAACAGAAAAGCAATACTTCCTTGGCATTATATACGAAACACCTCTATTCTCTTCCTCTCGTTCTTCCTCCTCCTTCACTTCACACTACTCTTCCCACCGCTGGTTTCACTGCCTGCATCTTCTGAAGCCATTTGAAGACCCTTCTCTGCTTCTCCACTTCATGAAGAGGCTAGTGGTTTTGTTTGGTAGGTTGGGTGAAAGATCTGTCTTGTCCGTTAAAACTGATGTCGAGATCTTAGTAGTTGACGTACGAGTGGCTGTGCTTCTGGTGTTAAGCTCTGCTCTGGAAAGTGATGGCGAGGATAACAATGGTGGACCCTGTAGGCACAGAGTATTGGACACGAGGCCTCACAGTGTGTCAATATTAGAGTTTGGAGCAGTAGGAGATGGGAAAACATTGAACACTGTAGCCTTCCAAAATGCAATATTTTACCTTAAGTCCTTTGCTGATAAAGGTGGTGCTCAGCTCTATGTGCCATCCGGCACATGGCTTACCGGAAGCTTCAACCTCACCAGCCACCTCACCCTCTTCCTTGCAAGAGGCGCCACCATTCTTGGATCCCAGGATTTTGAGCACTGGAGTGTGGTGGATCCACTGCCTTCTTATGGTCGAGGAATTGAAGTCCCAGGAGGGAGATATCGCAGCTTAATTTACGGGCAAAATCTAAGTGATGTGGTGATCACAGGTGATAATGGAACCATTGATGGCCAGGGTTCTGTGTGGTGGAACATGTTCAGTTCTCATTCCTTAAATTACAGCCGACCACATCTTGTGGAATTCATAGGTTCTGATGACATCATTATCTCAAATTTAACGTTTTTGAATCCTCCTGCTTGGGACATTCATCCAGTATATTGCAGCAACGTTCAAATCCACAACATAACAGCTTGTGCCCCAGTTGAATCCCCTTACACCAGTGGCATAGTTCCAGATTCTTCTGAGTATGTTTGCATTGAAAACAGCAATATTAGCAGTGGTCACGATGCAATTGTGCTGAAGAGTGGATGGGATGAGTATGGGGTCTCATATGGCAAAGCAACCTCGAGTGTCCACATCAGGAACGTTCGGGTTCAATCCTCATCAGGGGCTGGCCTAGCATTTGGAAGTGAGATGTCTGGAGGCATATCCAACATATTTGTGCAACAGCTTCATATATTCGATTCCCATGTTGGCATCGAAGTGAAGACAACCAGGGGTAGAGATGGCTATGTGAAAGACATATTCATTTCAGATGCAGAATTGGAAAATATTTATCTGGGTTTCAGCATCACTGGATTCTCTGGTTCCCATCCAGATGACGAGTACGATCCAAGTGCACTTCCTGTTGTTCGTGCCATTACTTTTAACGACGTGATTGGTGAAAATGTTATTATTGCTGGAAATTTTTCTGGATTAGTTGATTCACCATTCACATCAATCTGTCTTTCAAACGTGACTTTTTCAATCAGCTCTGACTCATCTCCTTTGTGGTTTTGTTCTAATGTAACGGGCTTCTCTGAAGAGGTACTTCCTGATCCATGTCCTGATCTTCAGAGCTCTTCTTTCTCAGCTTGCTTCACTTCCCTAAATCCATCAACATATGTCTCCAGCTTATGA 1635 0.4477 MIGGPPEGVVTWQTEKQYFLGIIYETPLFSSSRSSSSFTSHYSSHRWFHCLHLLKPFEDPSLLLHFMKRLVVLFGRLGERSVLSVKTDVEILVVDVRVAVLLVLSSALESDGEDNNGGPCRHRVLDTRPHSVSILEFGAVGDGKTLNTVAFQNAIFYLKSFADKGGAQLYVPSGTWLTGSFNLTSHLTLFLARGATILGSQDFEHWSVVDPLPSYGRGIEVPGGRYRSLIYGQNLSDVVITGDNGTIDGQGSVWWNMFSSHSLNYSRPHLVEFIGSDDIIISNLTFLNPPAWDIHPVYCSNVQIHNITACAPVESPYTSGIVPDSSEYVCIENSNISSGHDAIVLKSGWDEYGVSYGKATSSVHIRNVRVQSSSGAGLAFGSEMSGGISNIFVQQLHIFDSHVGIEVKTTRGRDGYVKDIFISDAELENIYLGFSITGFSGSHPDDEYDPSALPVVRAITFNDVIGENVIIAGNFSGLVDSPFTSICLSNVTFSISSDSSPLWFCSNVTGFSEEVLPDPCPDLQSSSFSACFTSLNPSTYVSSL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1681 544 Gene3D - 120 512 IPR012334 -
Bisa07g1681 544 SUPERFAMILY Pectin lyase-like 120 523 IPR011050 -
Bisa07g1681 544 SMART pbh1 326 347 IPR006626 -
Bisa07g1681 544 SMART pbh1 417 438 IPR006626 -
Bisa07g1681 544 SMART pbh1 360 382 IPR006626 -
Bisa07g1681 544 SMART pbh1 276 301 IPR006626 -
Bisa07g1681 544 SMART pbh1 388 409 IPR006626 -
Bisa07g1681 544 Pfam Glycosyl hydrolases family 28 169 509 IPR000743 GO:0004650|GO:0005975
Bisa07g1681 544 PANTHER PECTIN LYASE-RELATED 114 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1681 Bisa-ChrBisa07 42709531 42714220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1681 100 532 Glycoside Hydrolase AT3G16850 59.815 0.0 532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0302 03 4046509 4056751 Bisa07g1681 07 42709531 42714220 CCT
Bisa07g1681 07 42709531 42714220 Bisa07g1681 07 42709531 42714220 ECH