Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0302 ATGCTTCCTTCGATGGATTTTGTAGCAGAAGATGGACGTAATGAAGAAAAGAAATTTGGGTTTTTCTCTAACCCCAAAATAAAAGAAGAAGAAGAAAAGATTGGTCAAGAACAGAATGATGAAAAAGAAGAAGATAAAGGCGTTATAAGCAGCTTGATATCCAGCATGTTAAGAGGGGAAGCTGATAAGCACGAAGGCAGACACAGACGGCAGTGGAACTTTGTTGGCATTATATACGAAACAGCCCTGTTTTCTTCTTCCCCTTTCTGTCTTCTTAATTCTACCCTTCTCCTCTTTTCTTCACTTTCACTACTGTTCCTGCACTGCTTTAACAAAAGGTTTCCAGTTCGTCGCTGTTTCAATCAATTGAAGATGAAGAAATGGGCAAGACCCACGAAGAGGCTAGTATCTGTGCTATTACTTCTGGCATTAAGCTTTGGTCTAGAAAGTAATGGGGAAGATAATGGTGAAACATGTGAACAAAAAGCACTGGATGCCAGGCCTCACAGCGTGTCAATCTTGGAGTTTGGGGCAGTTGGAGACGGAAAAACTTTGAATACAGTCGCATTCGAAAATGCAATCTTTTATCTTAAGTCCTTTGCTGATAAAGGTGGTGCTCAGCTATATGTTCCCTCAGGCAGATGGCTTACTGGAAGTTTCAACCTTACCAGCCACCTCAATCTTTTCCTGGAAAGAGATGCTACCATTATTGCATCTCAGGATTTTGCACACTGGCTTGTAGATGATCCCCTTCCTTCTTATGGTCGAGGGCTTGATGTTCCTGGTGGGAGGTATCGCAGCTTGATTTACGGAAAGAATTTGAGTGACGTGGTGATTACAGGCAGGAATGTTCTCCATTGTTATCGTGATAATGGAACTATTGATGGCCAGGGTTCGGTCTGGTGGGAACTGTTCAGCTCTCATTCCTTAAATTATAGCCGGCCCCATCTTGTGGAATTAATCGATTCTGATCATATCATAATCTCAAATTTGACATTTCTAAATTCTGCTGCTTGGGACATCCATCTGGTATATTGCAGCAACGTTCAAATTCAGAACATAACTGCTCAAGCTCCAGCTGAATCCCCTTACACTAGTGGAATAGTGCCAGATTCTTCTGAGTATGTTTGCATTGACAACAGCAATATCAGCACCAGTCATGATGCAATAGTACTAAAGAGTGGTTGGGATCAATATGGAGTTACTTACAGCACACCAACTTCGAAAGTCTTCATTAAGGATGTTCACCTACAATCATCATCAGGTGCTGGCCTGGCATTTGGAAGTGAGATGTCAGGAGGTATATCCAACATAACTGTGAAGCAGCTCCATGTATTCAACTCACGAGTTGGCATTGAACTCAAGACAACCAGGGGTAGAGGTGGCTATGTGAATGACATCTTCATTTCTGATGCAGAATTGGAAAGTATTCACTTAGGTATCAGCTTGACCGGATACAGTGGCTCTCATCCGGATGACAAGTATGATCCGAGTGCACTTCCAGATGTTCATGGCATTACTTTTAAGAATGTAATTGGAGCAAATGTCTCTATTGCTGGGAATTTTTCAGGAATAGTTGAATCTCCATTCACATCAATATGCCTTTCAAACATGACCTTTTCCAACAGTTCTGATTCATCATCATCTCCTTCATGGTTTTGTTCCCATGTCACGGGTTTCTCTGAGGAGGTATCTCCTGAGCCATGCTCTGATCTCGAGGGCTCATATTTTAATTTTTCTTTTTCTTTTTCTTTTTCTTGCTTTTCTTCCCTACATCCATCCTATAGTTATGTCTCAAGCTTATGA 1806 0.4153 MLPSMDFVAEDGRNEEKKFGFFSNPKIKEEEEKIGQEQNDEKEEDKGVISSLISSMLRGEADKHEGRHRRQWNFVGIIYETALFSSSPFCLLNSTLLLFSSLSLLFLHCFNKRFPVRRCFNQLKMKKWARPTKRLVSVLLLLALSFGLESNGEDNGETCEQKALDARPHSVSILEFGAVGDGKTLNTVAFENAIFYLKSFADKGGAQLYVPSGRWLTGSFNLTSHLNLFLERDATIIASQDFAHWLVDDPLPSYGRGLDVPGGRYRSLIYGKNLSDVVITGRNVLHCYRDNGTIDGQGSVWWELFSSHSLNYSRPHLVELIDSDHIIISNLTFLNSAAWDIHLVYCSNVQIQNITAQAPAESPYTSGIVPDSSEYVCIDNSNISTSHDAIVLKSGWDQYGVTYSTPTSKVFIKDVHLQSSSGAGLAFGSEMSGGISNITVKQLHVFNSRVGIELKTTRGRGGYVNDIFISDAELESIHLGISLTGYSGSHPDDKYDPSALPDVHGITFKNVIGANVSIAGNFSGIVESPFTSICLSNMTFSNSSDSSSSPSWFCSHVTGFSEEVSPEPCSDLEGSYFNFSFSFSFSCFSSLHPSYSYVSSL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0302 601 Pfam Glycosyl hydrolases family 28 276 558 IPR000743 GO:0004650|GO:0005975
Bisa03g0302 601 PANTHER PECTIN LYASE-RELATED 139 574 - -
Bisa03g0302 601 SUPERFAMILY Pectin lyase-like 165 571 IPR011050 -
Bisa03g0302 601 Gene3D - 153 558 IPR012334 -
Bisa03g0302 601 SMART pbh1 407 429 IPR006626 -
Bisa03g0302 601 SMART pbh1 498 520 IPR006626 -
Bisa03g0302 601 SMART pbh1 346 372 IPR006626 -
Bisa03g0302 601 SMART pbh1 464 485 IPR006626 -
Bisa03g0302 601 SMART pbh1 373 394 IPR006626 -
Bisa03g0302 601 SMART pbh1 435 456 IPR006626 -
Bisa03g0302 601 MobiDBLite consensus disorder prediction 23 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0302 Bisa-ChrBisa03 4046509 4056751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0302 133 575 Glycoside Hydrolase AT3G16850 57.432 0.0 525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0302 03 4046509 4056751 Bisa07g1681 07 42709531 42714220 CCT
Bisa03g0302 03 4046509 4056751 Bisa03g0302 03 4046509 4056751 ECH