Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1456 ATGTCTTCTTTGAGCAGAGAATTGGTGTTTCTCATACTCCAATTTCTGGAGGAGGAGAAGTTTAAAGAGTCGGTGCACAAGCTGGAGAAAGAATCTGGGTTTTTCTTCAACATGAAGTACTTTGAAGAGAAAGTTCAGGCTGGAGAGTGGGAAGAAGTTGAGAAGTACTTGTCAGGATTTACTAAAGTTGATGATAATAGATACTCCATGAAAATATTCTTTGAAATCAGGAAACAAAAATATCTGGAAGCTCTTGATCGGCAAGACAGGTCAAAAGCTGTTGAGCTGTTAGTTACTGATTTAAAAGTGTTCTCCACTTTCAATGAGGATCTATATAAAGAAATTACACAGTTGTTAACCCTTAATAATTTCAGGGAGAATGAGCAGCTGTCCAAGTATGGTGACACCAAAACTGCTCGAAGCATTATGTTGATAGAGCTTAAAAAACTCATAGAAGCAAATCCTCTTTTCCGTGATAAACTTATCTTCCCTACTCTCAAGTCATCAAGATTACGCACTCTAATCAATCAAAGCTTGAACTGGCAACACCAACTTTGTAAAAATCCTCGGCCAAACCCAGATATCAAGACTTTATTCACTGATCACTCATGTACACCACCTAATGGTCCTCTGGCACCCACACCTGTCAATCTTCCGGTTGCAGCAGTTGCAAAGCCTGCTACTTATACTTCACTTGGAGCTCATGGTCCCTTTCCACCTGCTGCTGCAGCAACTGCTAATGCTAATGCTTTAGCTGGTTGGATGGCCAATGCCTCTGCTTCGTCATCTGTCCAAGCAGCTGTTGTCACTGCATCATCCATACCGGTTCCCCAGAATCAAGTGTCTATATTGAAACGTCCAAGAACACCTCCAGCAGCTCCTGGTATGGTTGATTATCAGAATCATGATCATGAACAGCTAATGAAAAGGCTTCGACCTGCTCATCCTGTGGAGGAGGTTTCCTATCCTATTGCTCGGCAAGCTTCTTTTTCACTGGATGATTTACCAAGAACAGTGGCTATGACTTTGCATCAAGGATCCTCTGTGACAAGCATGGATTTTCATCCTTCTCATCACTCATTGCTTCTTGTTGGTTCTACTAACGGTGAAATTACCCTCTGGGAACTTGCGTTGCGTGAGAGGTTGGTCTCAAAGCCATTCAAGATATGGGATATGGCGACATGCTCACTGGCATTTCAGGCAGCTGTTGTCAAAGATACACCTATTGCTGTTAGCCGTGTAACTTGGAGTCCAGATGGAAATTTTGTGGGTGTTGCATTTACCAAACATCTGATTCACCTGTATTCCTATACCGGTCCAAATGAATTAACTCAGCGTTTAGAGACTGATGCCCATATTGGCGGTGTGAATGACCTGGCATTTGCTCATCCAAATAAACAACTATGCATTGTGACTTGTGGAGATGACAAATTGATAAAGGTGTGGGAGTTGAATGGGCGAAGGCTGTTTACCTTTGAGGGGCATGAGGCACCTGTATATTCTATCTGTCCTCATCATAAAGAGAACATCCAGTTCATATTTTCAACTGCCATTGATGGGAAAATAAAGGCCTGGTTGTACGATAACATGGGTTCTAGAGTTGACTATGATGCTCCTGGTCATTGGTGTACCACAATGCTTTACAGTGCTGATGGCAGTAGATTGTTTTCTTGTGGGACTAGTAAAGATGGAGAATCTTTTCTAGTTGAATGGAATGAAAGTGAAGGAGCCATTAAGAGGACATACAATGGGTTCAGAAAGAAATCTGCTGGTGTTGTGCAGTTTGATACAACCCAAAATCGCTTCTTGGCGGCAGGTGAAGATGGCCAAATAAAGTTTTGGGATATGGACAATGTTAATCTTCTAACAAGCACTGAAGTAGAGGGTGGACTACAGAGCCTTCCACGCTTGAGATTTAATAAAGAAGGAAATCTTCTTGCCGTTACTACTGGGGACAATGGATTCAAGATACTTGCAAATACTGTTGGTCTTAGATCCTTGAGAGCAATAGAAACTCCAGCTTTTGATGCATTGAGGTCGCCCATTGAATCTGCTGCAATCAAGGTATCTGGTACCTCTGCTGTTAATGTTAGTCCTGTCAACTTGAAAGTGGAAAGGAGCTCCCCTGTCAGGCCTTCTCCGATTCTCAATGGAGTTGATCCTATGGGTCGAAGTGTGGAGAAACCAAGAACTGTTGAAGATATAGATAGAGCTAAACCATGGCAGCTGTCTGAAATTGTGGATCCTGTTCAGTGTCGGTTAGTTAACATGCCTGACAACACAGATTCTTCCAGCAAGGTAGTTCGACTTCTATACACAAATTCTGGTGTTGGGGTCTTAGCTCTTGGGTCAAATGGTACCCAGAAACTATGGAAGTGGGCTCGCAATGAACAGAATTCCACTGGGAAGGCTACTGCCAGTGTTGTTCCACAACATTGGCAACCCAACAGTGGTCTTCTTATGACTAATGACATCTCAGGCGTCAACCTTGATGAAGCAGTTCCTTGCATTGCTCTCTCAAAGAACGACTCATATGTTATGTCTGCCTGCGGCGGAAAGGTTTCACTATTTAACATGATGACGTTCAAGGTGATGACAACATTCATGCCGCCGCCTCCTACCTCTACCTTCTTAGCTTTCCATCCCCAGGATAACAATATCATAGCCATTGGGATGGAGGATTCAACCATTCACATTTACAATGTTAGAGTGGATGAGGTGAAATCAAAACTGAAGGGACACCAGAAGCGCATTTCTGGTTTAGCCTTTTCAACCAATCTCAACATACTGGTTTCATCTGGTGCTGATGCTCAACTGTGTGTTTGGAGCATTGATACTTGGGAGAAAAGAAAGTCAATGACAATACAATTACCTGCCGGAAAGGCTCCTGTTGGTGATACACGAGTGCAGTTTCATTCTGACCAACTTCGCCTATTGGTGGTCCATGAGACTCAGCTGGCAATATATGATGGCTCCAAGATGGATCGCATTCGGCAGTGGATTCCTCAAGATGTTCTTCATGCTGCCATAACATATGCAGCTTATTCGTGCAACAGTCAGTTAATATATGCTACCTTTTCTGATGGTAACATTGGGGTCTTTGATGCCGACAGTTTGCGACTACGATGTCGTATTGCTCCATCAGCATACCTGTCACAGGCAGCTTTAAATGGAAGCCAAGCAGTGTACCCTCTGGTTGTTGCGGCTCATCCAACAGAGCCGAACCAATTTGCTGTTGGGTTTAGTGATGGGTCAGTGAAGGTGATGGAGCCCACTGAATCAGAGGGTAAGTGGGGATCTAGTCCACCAATGGATAATGGAATCTTGAATGGTAGGACAGCATCATCTTCTACAACAAGCAACCACACCCCTGATCAGCCACAACGATAG 3390 0.4351 MSSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRQDRSKAVELLVTDLKVFSTFNEDLYKEITQLLTLNNFRENEQLSKYGDTKTARSIMLIELKKLIEANPLFRDKLIFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHSCTPPNGPLAPTPVNLPVAAVAKPATYTSLGAHGPFPPAAAATANANALAGWMANASASSSVQAAVVTASSIPVPQNQVSILKRPRTPPAAPGMVDYQNHDHEQLMKRLRPAHPVEEVSYPIARQASFSLDDLPRTVAMTLHQGSSVTSMDFHPSHHSLLLVGSTNGEITLWELALRERLVSKPFKIWDMATCSLAFQAAVVKDTPIAVSRVTWSPDGNFVGVAFTKHLIHLYSYTGPNELTQRLETDAHIGGVNDLAFAHPNKQLCIVTCGDDKLIKVWELNGRRLFTFEGHEAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSRLFSCGTSKDGESFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDGQIKFWDMDNVNLLTSTEVEGGLQSLPRLRFNKEGNLLAVTTGDNGFKILANTVGLRSLRAIETPAFDALRSPIESAAIKVSGTSAVNVSPVNLKVERSSPVRPSPILNGVDPMGRSVEKPRTVEDIDRAKPWQLSEIVDPVQCRLVNMPDNTDSSSKVVRLLYTNSGVGVLALGSNGTQKLWKWARNEQNSTGKATASVVPQHWQPNSGLLMTNDISGVNLDEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPTSTFLAFHPQDNNIIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRISGLAFSTNLNILVSSGADAQLCVWSIDTWEKRKSMTIQLPAGKAPVGDTRVQFHSDQLRLLVVHETQLAIYDGSKMDRIRQWIPQDVLHAAITYAAYSCNSQLIYATFSDGNIGVFDADSLRLRCRIAPSAYLSQAALNGSQAVYPLVVAAHPTEPNQFAVGFSDGSVKVMEPTESEGKWGSSPPMDNGILNGRTASSSTTSNHTPDQPQR 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1456 1129 ProSiteProfiles Trp-Asp (WD) repeats profile. 911 952 IPR001680 GO:0005515
Bisa07g1456 1129 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Bisa07g1456 1129 ProSiteProfiles Trp-Asp (WD) repeats profile. 342 384 IPR001680 GO:0005515
Bisa07g1456 1129 MobiDBLite consensus disorder prediction 1106 1129 - -
Bisa07g1456 1129 FunFam TOPLESS-related 3 403 699 - -
Bisa07g1456 1129 ProSiteProfiles Trp-Asp (WD) repeats profile. 593 624 IPR001680 GO:0005515
Bisa07g1456 1129 Gene3D - 828 1100 IPR015943 GO:0005515
Bisa07g1456 1129 SMART ctlh 34 92 IPR006595 -
Bisa07g1456 1129 Gene3D - 329 562 IPR015943 GO:0005515
Bisa07g1456 1129 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 911 946 - -
Bisa07g1456 1129 Gene3D - 563 672 IPR015943 GO:0005515
Bisa07g1456 1129 Pfam WD domain, G-beta repeat 450 482 IPR001680 GO:0005515
Bisa07g1456 1129 Pfam WD domain, G-beta repeat 910 943 IPR001680 GO:0005515
Bisa07g1456 1129 SUPERFAMILY WD40 repeat-like 831 1091 IPR036322 GO:0005515
Bisa07g1456 1129 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1113 IPR027728 GO:0006355
Bisa07g1456 1129 SUPERFAMILY WD40 repeat-like 336 656 IPR036322 GO:0005515
Bisa07g1456 1129 MobiDBLite consensus disorder prediction 1090 1129 - -
Bisa07g1456 1129 SMART Lish 4 36 IPR006594 GO:0005515
Bisa07g1456 1129 SMART WD40_4 336 375 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 999 1035 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 392 436 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 485 526 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 861 901 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 529 572 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 904 943 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 575 615 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 1049 1090 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 822 858 IPR001680 GO:0005515
Bisa07g1456 1129 SMART WD40_4 440 483 IPR001680 GO:0005515
Bisa07g1456 1129 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Bisa07g1456 1129 ProSitePatterns Trp-Asp (WD) repeats signature. 470 484 IPR019775 -
Bisa07g1456 1129 FunFam Topless-related protein 3 730 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1456 Bisa-ChrBisa07 37304661 37316999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1456 451 657 Miscellaneous Gene Families AT5G08390 25.118 8.12e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1310 03 17550123 17550701 Bisa07g1456 07 37304661 37316999 CCT
Bisa07g1456 07 37304661 37316999 Bisa07g1456 07 37304661 37316999 ECH