Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1310 ATGACTAATGATATCTCAGGTGTTAACCTTGAAGAAGCAGTTCCCTGCATTGCGCTTTCAAAGAATGACTCATATGTTATGTCTGCCTGTGGTGGAAAAGTTTCATTATTTAACATGATGACATTCAAGGTATTGACAACTTTCATGCCACCACCTCCTACCTCTACTTTTCTAGCTCTCCATCCCCAGGCTAACAACATCATAGCCATTGGGATGGAGGATTCAACCATTCATATTTATAATGTTAGAGTGGATGAGGTCTCAAAATTGAAGGGTCATCAGAAGTGTATTACTGGCTTAGCCTTTTCAACCAATCTTAACATACTGGTTTCATCTGGTGCTGATGCTCAAGTACGTCCAGTAACAGCTTTTTTACATTTAAGATTTGAAAAGACATGA 399 0.3885 MTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVLTTFMPPPPTSTFLALHPQANNIIAIGMEDSTIHIYNVRVDEVSKLKGHQKCITGLAFSTNLNILVSSGADAQVRPVTAFLHLRFEKT 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1310 132 Gene3D - 3 123 IPR015943 GO:0005515
Bisa03g1310 132 ProSiteProfiles Trp-Asp (WD) repeats profile. 90 119 IPR001680 GO:0005515
Bisa03g1310 132 Pfam WD domain, G-beta repeat 87 119 IPR001680 GO:0005515
Bisa03g1310 132 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 118 IPR027728 GO:0006355
Bisa03g1310 132 SMART WD40_4 2 38 IPR001680 GO:0005515
Bisa03g1310 132 SMART WD40_4 41 81 IPR001680 GO:0005515
Bisa03g1310 132 SMART WD40_4 83 122 IPR001680 GO:0005515
Bisa03g1310 132 SUPERFAMILY WD40 repeat-like 11 119 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1310 Bisa-ChrBisa03 17550123 17550701 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1310 03 17550123 17550701 Bisa07g1456 07 37304661 37316999 CCT
Bisa03g1310 03 17550123 17550701 Bisa03g1310 03 17550123 17550701 ECH