Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1964 ATGTGGTGGCTTCTCATAGATCAATGGGAGGTCAGATATCCCAGCTTACACTGTGATGTCTTAGTCACTTCTGATATACGAGGCTTTGTTCTCTCTCTACTGAAGCTAGTTGTTCTCCAATCTGTAAACATGCCTCTCAGACTCGAAATCAAGAGAAAACTTGCACAAAGATCAGAAAGAGTAAAGTCCGTGGATCTACATCCAACAGAACCATGGATTCTAGCAAGTTTATATTCAGGAACTGTCTGTATCTATAACTACCAGTCTCAGACCATAACGAAGTCTTTTGAGGTCACTGAGTTACCAGTTAGGTCAGCCAAGTTTATTGCACGAAAACAGTGGGTTGTTGCCGGGGCAGATGACATGTTTATTCGTGTATATAATTACAATACAATGGATAAAGTTAAAGTATTTGAGGCACATACGGATTACATAAGGTGTGTGGCAGTTCATCCTACCCTTCCTTGCGTTCTGTCATCATCTGATGATATGCTCATAAAGCTTTGGGATTGGGAGAAAGGCTGGCTGTGTACTCAGATATTTGAGGGACATTCTCATTATGTCATGCAAGTGACATTTAATCCTAAAGACACCAATACCTTCGCCAGTGCATCTCTTGATCGCACCATAAAGATTTGGAATCTTGGCTCTCCTGACCCCAATTTTACACTGGATGCACATCAGAAAGGGGTGAATTGTGTTGATTACTTTACAGGTGGTGACAAACCTTATCTGATTACTGGTTCTGATGATCACACTGCTAAGGTTTGGGACTATCAGACCAAAAGTTGTGTCCAGACTCTAGAAGGTCATACACACAATGTATCTGCTGTATTCTTTCATCCTGAACTTCCTATAATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCAACAACTTATAGGCTTGAGAACACGTTGAACTATGGTCTGGAAAGAGTTTGGGCTATTGGATACATGAAAGGTTCACGTCGGGTTGCAATTGGCTATGATGAGGGAACTATCATGGTCAAACTGGGTCGAGAAGAACCTGTGGCCAGCATGGACAACAGTGGGAAAATTATTTGGTCTAAACACAATGAAATTCAGACTGTCAATATAAAGAGTGTAGGAGCAGATGTGGAGGTTGCTGATGGAGAAAGATTACCTTTGGCTGTTAAAGAATTGGGCACCTGTGATCTCTACCCTCAGAGTTTAAAGCACAATCCAAATGGGAGGTTCGTTGTTGTATGTGGAGATGGTGAGTATGTTATATACACTGCATTGGCATGGAGAAATAGGTCATTTGGTTCGGCGCTGGAAATTGTTTGGTCTTCAGATGGTGAATATGCTGCTAGAGAAAGTACATCAAAGATTAAAATATTCACAAAAAATTTCCAGGAAAAGAGGAGTATTCGACCAACATTTTCAGCTGAACGACTATTTGGTGGCACTCTACTAGCAATGTGCTCAAATGATTTCATTTGCTTTTATGATTGGGGTGAATGCAGGTTAATCCGTCGCATTGATGTTAGTGTGAAAAATCTCTACTGGGCTGATAGTGGTGACCTTGTAACAATTGCTAGTGATACATCATTCTACATCCTGAAGTACAATCGTGATATTGTTGCACCATATTTGGATAGTGGAAGACCTGTAGATGAGCTAGGGCTGGAAGATGCCTTTGAGCTCCTTCATGAAATAAATGAACGTGTCAGGACTGGCATCTGGGTTGGGGATTGTTTTATTTACAACAATTCCTCTGGGAGGCTTAATTACTGTGTTGGTGGTGAGGTAACTACAATGTTTCATTTGGACCGTCCTATGTACTTGTTGGGATATCTTGCCAACCAAAGTCGGGTCTATTTGATAGACAAAGAGTTCAATGTCATGGGATACACACTGCTTTTAAGCTTGATTGAGTACAAGACTCTTGTAATGCGTGGTGATTTGGGAAGGGCCAATGAAGTTCTACCATCAATTCCTAAAGAGCACCATAATAGTGTGGCTCGCTTCTTGGAATCACGAGGGATGATAGAGGATGCTCTCAAAGTAGCTACTGATCCTGATTATAGGTTTGAGCTAGCTATGCAGCTTGGAAGATTAGAGGTGGCAAAGAGTATTGCAGCAGAAGTGCATAGTGAGTCTAAATGGAAGCAGTTGGGCGAGTTGGCTATGTCTACTGGAAAGTTAGAAATGGCTGAAGAATGTTTAAAGCATGCAATGGATTTTAGTGGGTTGTTACTGCTATATTCATCTTTAGGAGATGCTGAGGGAATATCAAAACTTGCAACCCTTGCTAAAGAGCAAGGGAAGAACAACGTTGCATTCCTTTGCATGTTTATGTTGGGAAAACTTGAAGACTGCCTTCAACTGTTGGTAGAAAGCAATCGGATTCCTGAGGCTGCTTTAATGGCACGATCTTATCTCCCAAGCAAGGTCTCAGAGATTGTAGCAATTTGGAGAAAGGATCTCAACAAGGTTAGCCCCAAAGCTGCTGAGTCATTGGCTGATCCCGAGGAGTATCCTAATTTGTTTGAAGACTGGCAAGTTGCAGTTGCTGTTGAATCTAAATCTGCAGAGATAAGGGGTGTTTACCCTCCTGCAGAGGAGTATGTCAAGTATGCTGGAAAGTCACATGTTACCCTTGTTGACGGTTTCAGAAACATGCAGATTGAAGAAGGGGAAGAGCTTGAAAATGGAGACTATAATCATGAGTTGACTGAACAAAATGCAGAGGAAAAGGGGGAGGAACTAAATGGAGAGCAGGGAAGCATTGAGGAGGCAGTTGTGGTGGATGCTGATTCTATAGATGGTGTAGTACTTGTTAATGGTAGCGAGGCTGATAAAGAAGGAGGCTCATCAGCCTAA 2859 0.4194 MWWLLIDQWEVRYPSLHCDVLVTSDIRGFVLSLLKLVVLQSVNMPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIYNYQSQTITKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPCVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVFFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVAIGYDEGTIMVKLGREEPVASMDNSGKIIWSKHNEIQTVNIKSVGADVEVADGERLPLAVKELGTCDLYPQSLKHNPNGRFVVVCGDGEYVIYTALAWRNRSFGSALEIVWSSDGEYAARESTSKIKIFTKNFQEKRSIRPTFSAERLFGGTLLAMCSNDFICFYDWGECRLIRRIDVSVKNLYWADSGDLVTIASDTSFYILKYNRDIVAPYLDSGRPVDELGLEDAFELLHEINERVRTGIWVGDCFIYNNSSGRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLGRANEVLPSIPKEHHNSVARFLESRGMIEDALKVATDPDYRFELAMQLGRLEVAKSIAAEVHSESKWKQLGELAMSTGKLEMAEECLKHAMDFSGLLLLYSSLGDAEGISKLATLAKEQGKNNVAFLCMFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVSPKAAESLADPEEYPNLFEDWQVAVAVESKSAEIRGVYPPAEEYVKYAGKSHVTLVDGFRNMQIEEGEELENGDYNHELTEQNAEEKGEELNGEQGSIEEAVVVDADSIDGVVLVNGSEADKEGGSSA 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1964 952 PRINTS G protein beta WD-40 repeat signature 287 301 IPR020472 -
Bisa06g1964 952 PRINTS G protein beta WD-40 repeat signature 245 259 IPR020472 -
Bisa06g1964 952 PRINTS G protein beta WD-40 repeat signature 201 215 IPR020472 -
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 224 261 - -
Bisa06g1964 952 Pfam Coatomer WD associated region 362 806 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
Bisa06g1964 952 SUPERFAMILY WD40 repeat-like 270 533 IPR036322 GO:0005515
Bisa06g1964 952 CDD WD40 60 340 - -
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 268 309 IPR001680 GO:0005515
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 268 299 - -
Bisa06g1964 952 Gene3D - 633 841 - -
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 181 223 IPR001680 GO:0005515
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 170 IPR001680 GO:0005515
Bisa06g1964 952 SUPERFAMILY WD40 repeat-like 45 340 IPR036322 GO:0005515
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 224 267 IPR001680 GO:0005515
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 181 215 - -
Bisa06g1964 952 PANTHER COATOMER 47 356 - -
Bisa06g1964 952 CDD Coatomer_WDAD_beta-like 347 822 - -
Bisa06g1964 952 Gene3D - 54 343 IPR015943 GO:0005515
Bisa06g1964 952 Pfam WD domain, G-beta repeat 220 258 IPR001680 GO:0005515
Bisa06g1964 952 Pfam WD domain, G-beta repeat 177 214 IPR001680 GO:0005515
Bisa06g1964 952 Pfam WD domain, G-beta repeat 263 299 IPR001680 GO:0005515
Bisa06g1964 952 Pfam WD domain, G-beta repeat 134 170 IPR001680 GO:0005515
Bisa06g1964 952 SMART WD40_4 217 258 IPR001680 GO:0005515
Bisa06g1964 952 SMART WD40_4 47 86 IPR001680 GO:0005515
Bisa06g1964 952 SMART WD40_4 261 300 IPR001680 GO:0005515
Bisa06g1964 952 SMART WD40_4 174 214 IPR001680 GO:0005515
Bisa06g1964 952 SMART WD40_4 131 170 IPR001680 GO:0005515
Bisa06g1964 952 SMART WD40_4 89 128 IPR001680 GO:0005515
Bisa06g1964 952 FunFam Coatomer subunit beta 54 343 - -
Bisa06g1964 952 PIRSF Beta'-COP 45 925 IPR016453 -
Bisa06g1964 952 FunFam Coatomer subunit beta 633 841 - -
Bisa06g1964 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 138 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1964 Bisa-ChrBisa06 62727280 62737909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1964 58 410 Miscellaneous Gene Families AT5G08390 20.442 3.24e-09 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1841 10 50420412 50430815 Bisa06g1964 06 62727280 62737909 CCT
Bisa06g1964 06 62727280 62737909 Bisa06g1964 06 62727280 62737909 ECH