Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g0092 ATGCTTCAGCCCCCTACTTCACCAGCCATGGTTACAGCTGAAGTACTGCCTGAGAATCCCCTTCAGGGAGTTCCCATCTTGCCTAAAGATACCACCTCTTCTTCTTCTTCTTCTTCCAGAAGATCTCTCCCAGATGTAGCTATCCATAGTGTCAAATGTAAAATGCAGAAATTGGAAGGCAAAGTCGCCGTCGTAACTGGCGGAGCAAGAGGAATCGGGGAAGCGACGGTGAGAACATTCGTCAAGCACGGCGCGAAGGTAGTGATCGCGGACATCGAAGACGTAGTGGGATCTCTACTCGCGGAGACACTATCTCCGTCGGCCACTTTCCTCCACTGCGACGTCACCTCGGAGGAAGACATCCAAAACGCCGTCGACGTCGCCGTGTCTCGGTACGGCCAACTTGACATCATCTTCAATAACGCCGGCGTGCTCGGAAGCCAGTCCGAGCACCGCAAGACGATCGTGAACCTCGACGCCGAGGAGTTCGAGAGCGTGATGCGCGTGAACGTGAGAGGCGTGGCGCTCGGCATGAAACACGCGGCGAGGGCGATGATCCCGAGGCGGTGCGGATGTATCATATCGACGGCTAGCGTTGCTGGGCTTATGGGTGGGCTTGGGCCGCACGCGTACACGGCCTCGAAGCACGCGATTGTTGGGCTCACAAAGAACGCGTCCTGCGAGCTGGGGAAGTACGGGATTAGGGTTAATTGCATTTCGCCATTCGGAGTGGCGACTACTATGCTTGTGAATGCGTGGCGAGGAAGTCATGGCGATGAAGGGCAAGAAGAGAAAGAAGAAGAAGAAGAAGAAGAGGAAGTGGAGAAAATGGAGGAGTTTGTGAGAGGGATGGCGAATTTGAAAGGGACGACATTGAGGGCTAATGATGTTGCAGAGGCTGCGTTGTATCTTGCGAGTGACGAGTCCAAGTATCTGAGTGGTCATAACCTTGTTGTGGATGGTGGAATCACCTCTTCAAGAAATTGCATTGGTTTGTAA 999 0.5365 MLQPPTSPAMVTAEVLPENPLQGVPILPKDTTSSSSSSSRRSLPDVAIHSVKCKMQKLEGKVAVVTGGARGIGEATVRTFVKHGAKVVIADIEDVVGSLLAETLSPSATFLHCDVTSEEDIQNAVDVAVSRYGQLDIIFNNAGVLGSQSEHRKTIVNLDAEEFESVMRVNVRGVALGMKHAARAMIPRRCGCIISTASVAGLMGGLGPHAYTASKHAIVGLTKNASCELGKYGIRVNCISPFGVATTMLVNAWRGSHGDEGQEEKEEEEEEEEVEKMEEFVRGMANLKGTTLRANDVAEAALYLASDESKYLSGHNLVVDGGITSSRNCIGL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g0092 332 PRINTS Glucose/ribitol dehydrogenase family signature 211 230 IPR002347 -
Bisa06g0092 332 PRINTS Glucose/ribitol dehydrogenase family signature 287 307 IPR002347 -
Bisa06g0092 332 PRINTS Glucose/ribitol dehydrogenase family signature 133 144 IPR002347 -
Bisa06g0092 332 PRINTS Glucose/ribitol dehydrogenase family signature 232 249 IPR002347 -
Bisa06g0092 332 PRINTS Glucose/ribitol dehydrogenase family signature 62 79 IPR002347 -
Bisa06g0092 332 PRINTS Glucose/ribitol dehydrogenase family signature 185 201 IPR002347 -
Bisa06g0092 332 MobiDBLite consensus disorder prediction 26 43 - -
Bisa06g0092 332 CDD secoisolariciresinol-DH_like_SDR_c 57 324 IPR045309 GO:0016616
Bisa06g0092 332 FunFam Short-chain dehydrogenase reductase 53 328 - -
Bisa06g0092 332 Gene3D - 47 330 - -
Bisa06g0092 332 Pfam Enoyl-(Acyl carrier protein) reductase 67 324 - -
Bisa06g0092 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 59 324 IPR036291 -
Bisa06g0092 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 211 230 IPR002347 -
Bisa06g0092 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 144 IPR002347 -
Bisa06g0092 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 199 IPR002347 -
Bisa06g0092 332 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 53 327 - -
Bisa06g0092 332 MobiDBLite consensus disorder prediction 21 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g0092 Bisa-ChrBisa06 1738074 1739688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g0092 57 324 Acyl Lipid Metabolism Gene Families AT1G63380 31.900 1.22e-25 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g0092 06 1738074 1739688 Bisa10g0116 10 1878692 1880063 CCT