Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2241 ATGAGCTGTGAGAAGGACCACACTCTACAGTTCGGCGTCCACTATGCCACACGTGTAAGCGTGCGGCCCGCGCATTCCACACTCGTCAATCAAACTATAATATCTCCCACTCGTTTCTCCGAAGACCTCGCTTCTTCTTCCAACCTATTACCTAAACGTATAGTTGTATATCACTATATCGCTGTCAGTGTCACGCTCCCGGTTCTCGCACCCCTCATCCCTCTCTCTCTCTCCCTCTTCGGCATGGATCTCCATCGCCGCGGCCACCACGCCCCGCCCTCTCCGACCGCCACTCGCTACGCCGCCACCGCCGGAGGTCATCACCTTCAGAAGCCGTCCTCCGCCTCCTCCAACGGCACCCATCGAGCCCCATCTCCGACTCCGAAAGCCTCCGATGCGCTCCCTTTGCCGCTGTACCTAACCAACGCCATTTTCTTCACGCTCTTCTTCTCCGTTGCGTACTATCTCCTCCACCGCTGGCGGGACAAGATCCGGAACTCCACTCCGCTTCACGTTGTCACCTTTCCCGAGATCGCCGCCATTGTGTCGCTCATTGCGTCTTTCATATACCTCCTAGGGTTCTTCGGCATTGATTTCGTACAGTCTTTCATCGCACGTGCTTCTCACGATGTTTGGGACCTCGAGGACGATGCCACCGAGGCCGATGCTGCTGTCGAGTCTCGCTCTCACCGCCACCGTCACCGCCATGATTTTGTTATCGAGCAGCCGATTCCCAAATTGGTGGTGGATCCCGAACCCTTGGTTTCGTCTCTTTCTTCAGAGGAAGATGAGAAGATCGTCCAGTCCGTGCTGGATGGGACGATACCGTCTTACACTCTCGAGTCCAAGCTCGGGGACTGTAAGCGTGCGGCGGCAATACGGCGCGAGGCTTTGCAGAGAATGAGCGGGAGATCTCTTCAGGGTTTACCGTTGGATGACTTTGATTACGAGTCAATTTTGGGGCAGTGCTGCGAAATGCCGGTGGGCTATGTACAGATTCCAGTGGGAGTCGCTGGACCATTGTTGCTTGATGGGTTTGAGTATACAGTACCAATGGCAACCACTGAGGGGTGTTTGGTGGCCAGCACTAATAGAGGTTGTAAAGCCATTTATGCATCTGGTGGGGCAACCACTGTAGTGTTGCGGGATGCGATGACCAGGGCGCCTGTTGTAAGGTTCGCCACAGCCAAAAGGGCTTCTGAGTTGAAGTTTTTTTTGGAGGATCCTCTAAATTTTGATACCTTGGCCGTCATTTTTAATAGGTCAAGTAGATTTGCTAGGCTTCAAAGTATTCACTGTTCTATTGCTGGGAAGAACCTTTACTTGCGATTCAGCTGCAGCACTGGTGATGCCATGGGGATGAACATGGTTTCCAAAGGCGTGCAGAATGTTCTTGATTTCCTTCAAAATGATTTCCCTGATATGGATGTTATTGGCATCTCTGGAAATTATTGTTCGGACAAGAAACCTGCTGCTGTAAATTGGATTGAGGGACGTGGAAAGTCAGTTGTCTGTGAAGCAACTATTAAAGAGGAGGTGGTTAAGAAGGTACTAAAGACCAATGTGGCTGCCTTAGTGGAGCTTAACATGCTCAAAAACCTTGCTGGCTCTGCTGTTGCTGGTGCTCTTGGTGGCTTTAATGCTCATGCCAGCAACATTGTTTCTGCCATTTTTATAGCCACCGGTCAAGATCCAGCGCAAAACGTTGAGAGTTCTCATTGCATAACCATGATGGAAGCCGTCAACGACGGGAGGGACCTTCATATCTCAGTGTCTATGCCTTCGATTGAGGTGGGTACAATTGGTGGTGGGACTCAGCTGGCTTCTCAGTCTGCTTGCTTGAACTTGCTTGGCGTGAAGGGCGCCAGCAAGGAGTCACCAGGATCAAACTCAAGACTCTTGGCCACCATTATTGCTGGGTCAGTTTTAGCAGGAGAGCTATCGCTCTTATCTGCTATTGCTGCAGGTCAACTTGTGAATAGTCACATGAAATATAACAGAGCAAGCAAAGATGTCTCCAAAGTGTCATGTTGA 2034 0.5103 MSCEKDHTLQFGVHYATRVSVRPAHSTLVNQTIISPTRFSEDLASSSNLLPKRIVVYHYIAVSVTLPVLAPLIPLSLSLFGMDLHRRGHHAPPSPTATRYAATAGGHHLQKPSSASSNGTHRAPSPTPKASDALPLPLYLTNAIFFTLFFSVAYYLLHRWRDKIRNSTPLHVVTFPEIAAIVSLIASFIYLLGFFGIDFVQSFIARASHDVWDLEDDATEADAAVESRSHRHRHRHDFVIEQPIPKLVVDPEPLVSSLSSEEDEKIVQSVLDGTIPSYTLESKLGDCKRAAAIRREALQRMSGRSLQGLPLDDFDYESILGQCCEMPVGYVQIPVGVAGPLLLDGFEYTVPMATTEGCLVASTNRGCKAIYASGGATTVVLRDAMTRAPVVRFATAKRASELKFFLEDPLNFDTLAVIFNRSSRFARLQSIHCSIAGKNLYLRFSCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEATIKEEVVKKVLKTNVAALVELNMLKNLAGSAVAGALGGFNAHASNIVSAIFIATGQDPAQNVESSHCITMMEAVNDGRDLHISVSMPSIEVGTIGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIIAGSVLAGELSLLSAIAAGQLVNSHMKYNRASKDVSKVSC 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2241 677 MobiDBLite consensus disorder prediction 109 125 - -
Bisa05g2241 677 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 263 667 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 MobiDBLite consensus disorder prediction 90 129 - -
Bisa05g2241 677 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 598 605 IPR023076 GO:0004420
Bisa05g2241 677 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 119 670 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 Pfam Hydroxymethylglutaryl-coenzyme A reductase 291 667 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 443 457 IPR023076 GO:0004420
Bisa05g2241 677 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 489 662 - -
Bisa05g2241 677 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 263 667 IPR004554 GO:0004420|GO:0005515|GO:0008299
Bisa05g2241 677 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 652 665 IPR023076 GO:0004420
Bisa05g2241 677 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 384 500 - -
Bisa05g2241 677 Gene3D - 384 500 IPR009023 -
Bisa05g2241 677 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 350 370 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 441 459 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 481 506 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 532 558 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 323 344 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 586 607 IPR002202 GO:0004420|GO:0015936
Bisa05g2241 677 Gene3D - 254 333 IPR023282 GO:0004420
Bisa05g2241 677 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 259 333 - -
Bisa05g2241 677 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 385 500 IPR009023 -
Bisa05g2241 677 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 259 656 IPR009029 GO:0015936|GO:0016616
Bisa05g2241 677 CDD HMG-CoA_reductase_classI 264 667 IPR004554 GO:0004420|GO:0005515|GO:0008299
Bisa05g2241 677 Gene3D - 334 662 IPR023074 GO:0004420
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2241 Bisa-ChrBisa05 50934698 50937967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2241 64 673 Lipid Metabolism Gene Families AT1G76490 72.977 0.0 919
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g2241 05 50934698 50937967 Bisa11g1948 11 41882424 41885616 ECH
Bisa05g2241 05 50934698 50937967 Bisa05g2241 05 50934698 50937967 ECH