Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4005 ATGATATATTTGTTTCTCATTTGGTTTTTCCCAGACCCCCCTACATTTCTTTCCAAAGGTCTTGAAAATGAATATTCCGAGGATGAAAAAAAGAAAAGGATGGGGTCTCTAAAGAAGGTGGCAATCAGTGCCTCAAATAAGTTTAGGAATTCCTTCTCGAAGAGGGGTCGAAGGCACAGCCAGGTTATGTCTGTGGCTATTGAGGATGACCTTGATGCAGAAGAGTTGCAGGCAATTGATGCTTTTCGACAAACACTTGTTTTGGAAGAACTATTGCCTGCCAAGCAGGATGATCATCATATGATGCTAAGATTCTTGAAAGCAAGGAAGTTTGACCCTGAGAAAACAAAGCAAATGTGGGCAGACATGCTTCAGTGGAGGAAAGAATATGGTGCTGACACTGTCATGGAGGACTTTGAGTTCAAGGAGCTAGACGAACAAAGAAGCACATTGATCAAAGCACAACTATATTGGATGTGCAAGGAGTGGTATGTAAGAAATTCTAGAAATGTTCAATTCTTCAACTCTACATCCAAAGAACTGCTACTGCTAACTGGCATGGTTGATCAGGGTCTGAAAAATTTCAGCAAAGCTGCAAGGGATCTCCTTCAGCATCTTCAAAAGATTGATGGTGACAACTATCCTGAGACCTTGAATCGTATGTTCATCGTCAACGCCGGGTCTGGATTTAGGCTCTTGTGGAACACCGTTAAGTCATTCCTTGACCCTAAGACCTCCGCAAAAATCCATGTCCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGTGAACTTCCAGAGTTCTTGGGTGGTACTTGCACTTGTGCAGATAAAGGTGGTTGTATGGCTTCTGACAAGGGACCATGGAATGACCCAGAACTCTTGAAGATGGTTCAAAATGGCGAGGGAAAATGCCGAAGGAGACCCTTGAGTGATGTTGAGGAGAAAACTATATTTGAGGACCAAACGGCATACCATAAGGGATCCAATTCTTTCAAGAATGTACAATTTCTATCGCCAAAGAGTGTGGACCATCCCAAAGCAGTAGTTGCAAAACAAATGGGTAGGAACCCATATGATGCCTTTGCCCCGATGGTTGACAAAACTGTTGATTCACCCTGGAAAAGAGCAGCACAAAATAATAAATTTGCAAATGGCAAGGCATGCAAGGGTTATGATTCAAAGGGGAATCCAATAGTTGGTGGGTTCATGGCCATTATAATGGGAATTATCGCAGTGATCCGGTTGACTAAGGTTGTTCCCAAGAAGCTGACAGAAGCTGCTCTTTACAGCAACCAATCAGCAGCATATTATAATGCCAGCACATTGGTGAAAGCTGGGCACCAACACAAGCTGCCGGCTCCGGCGGTTTCCAGCAATGAGCACATAGTGTTGATGAAGCGCATGGCTGAGCTTGAAGAGAAGGTCAATGCTATCTCCACCAAACCTCCTATGCCACCAGAAAAGGAGCAAATGTTAAATGTTGCTCTTACCAGAGTCAGTGCTCTCGAACATGAGTTGAATGACGCCAAATTGGCACTTGATAATGCACTTGCTCGACAACGGGAGCTCCGAGCAGCCATTGATAAGAAGAAGAAGAAAAGGAGATTTGTACGTGAAACATCAACTCTTGCTTAA 1650 0.4358 MIYLFLIWFFPDPPTFLSKGLENEYSEDEKKKRMGSLKKVAISASNKFRNSFSKRGRRHSQVMSVAIEDDLDAEELQAIDAFRQTLVLEELLPAKQDDHHMMLRFLKARKFDPEKTKQMWADMLQWRKEYGADTVMEDFEFKELDEQRSTLIKAQLYWMCKEWYVRNSRNVQFFNSTSKELLLLTGMVDQGLKNFSKAARDLLQHLQKIDGDNYPETLNRMFIVNAGSGFRLLWNTVKSFLDPKTSAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMASDKGPWNDPELLKMVQNGEGKCRRRPLSDVEEKTIFEDQTAYHKGSNSFKNVQFLSPKSVDHPKAVVAKQMGRNPYDAFAPMVDKTVDSPWKRAAQNNKFANGKACKGYDSKGNPIVGGFMAIIMGIIAVIRLTKVVPKKLTEAALYSNQSAAYYNASTLVKAGHQHKLPAPAVSSNEHIVLMKRMAELEEKVNAISTKPPMPPEKEQMLNVALTRVSALEHELNDAKLALDNALARQRELRAAIDKKKKKRRFVRETSTLA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4005 549 Coils Coil 504 538 - -
Bisa01g4005 549 CDD SEC14 191 276 IPR001251 -
Bisa01g4005 549 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 191 536 - -
Bisa01g4005 549 SUPERFAMILY CRAL/TRIO N-terminal domain 69 138 IPR036273 -
Bisa01g4005 549 SMART CRAL_TRIO_N_2 98 123 IPR011074 -
Bisa01g4005 549 Pfam CRAL/TRIO, N-terminal domain 95 122 IPR011074 -
Bisa01g4005 549 SMART sec14_4 112 278 IPR001251 -
Bisa01g4005 549 Gene3D - 57 130 - -
Bisa01g4005 549 Pfam CRAL/TRIO domain 97 275 IPR001251 -
Bisa01g4005 549 Gene3D - 131 306 IPR036865 -
Bisa01g4005 549 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 181 281 IPR001251 -
Bisa01g4005 549 SUPERFAMILY CRAL/TRIO domain 162 303 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4005 Bisa-ChrBisa01 96408796 96415263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4005 77 272 Acyl Lipid Metabolism Gene Families AT5G47730 26.809 1.29e-12 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g4005 01 96408796 96415263 Bisa01g4005 01 96408796 96415263 ECH
Bisa01g4006 01 96417011 96421577 Bisa01g4005 01 96408796 96415263 ECH