LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g00324	ATGACAGAGGTCCTCCACTCCCCTTCCCATTTTTCTTCGTCTCCAAGGAGAAGCACTTCCTCTTCTCCATTATCCTTTGCGCCTTTATCTTCATTATCATGCGAACCCCCGTCTGATGATGGCATTCTCCTTATTAGAAACCAAGAATCTCTGACACCATCTTCTTCTCTGGCCGAGGACGGTTGTTCTACGGCGACCAACTGTGACACAGAGGAGCTCAAGGACAGGGATAAGCACAGGAGTGAACAACTTTCTATTTTGGCGCTTCTCGTTACCCTTTTCAGGAAATCCTTAATTGCTTGTAAGAGTGACAGGAGGGAGCTTTGTGCCATGGATATCGGGTGGCCCAGTAATGTGCGTCATGTTGCGCATGTCACGTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGCTGAGTTCGAACCCGAAGTTCCCAGGAGGCCTCCCAGTGCTAGTGCAACTGTTTTCGGAGTTTCAACGGAATCCATGCAGTTATCATATGACACTAGAGGGAACAGTGTGCCAACAATTCTGTTACTAATGCAAAGCCGCTTGTATGCTCAAAGAGGGTTGCAGACAGAGGGGATTTTCAGAATTAATGCAGAAAATAGTCAAGAGGAATATGTTAGGGACCAATTAAATAGGGGATTGGTCCCGGAAGGCATTGATGTACATTGTTTGGCAGGACTTATCAAGGCTTGGTTTAGGGAACTGCCAACAGGCGTTCTGGATTCTTTGTCACCTGAACAGGTAATGCAATGCCAGACTGAAGAGGAGTGTACGGAGCTGGTGAGGCGTCTTCCTCCCACTGAAGCTGCCCTTTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTTCAACAGGAACATATGAACAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAATATGACTCAAAATGCAGACCCTTTGACGGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGATGCTTATATTAAGGACAGTGAGAGAGAGAAAGGATTCTGTGATAGAATCTTTCCCTAGATTTCATTTAGAGCCTTTTGGTGAGAATGGGCATCATAGTACTTTGAAGTCTTGCTTGGATGATACTACACAAGAAAATGAAGAGACTCAGGAAAAGTTTGTTTTTCCCGATTCTCTCCAAGACTCGGGAGAATCTGGTAATTTGATTACCTCTTCCGAGAGTCCAGCTTGTGATTTGGAGTTGTATTGTGAGTTTCCACCTAAAGGAAATGTTGGGAAGAAGACTGGCCAATCAAGTAATTCAAATTCTAGAAAGGGGGCCAGAAAAGCCAAAGGCCAGCAAGCCACAAGCCAGGGAAAAGTGCCTGCTGAGAAAGCCAAGAGAAATAGCAATCTGAGCCGCAGAGATTCAAAATCCGAGCGGATAGAAGCCTGGCGGTAA	1425	0.4547	MTEVLHSPSHFSSSPRRSTSSSPLSFAPLSSLSCEPPSDDGILLIRNQESLTPSSSLAEDGCSTATNCDTEELKDRDKHRSEQLSILALLVTLFRKSLIACKSDRRELCAMDIGWPSNVRHVAHVTFDRFNGFLGLPAEFEPEVPRRPPSASATVFGVSTESMQLSYDTRGNSVPTILLLMQSRLYAQRGLQTEGIFRINAENSQEEYVRDQLNRGLVPEGIDVHCLAGLIKAWFRELPTGVLDSLSPEQVMQCQTEEECTELVRRLPPTEAALLDWAINLMADVVQQEHMNKMNARNIAMVFAPNMTQNADPLTALMYAVQVMNFLKMLILRTVRERKDSVIESFPRFHLEPFGENGHHSTLKSCLDDTTQENEETQEKFVFPDSLQDSGESGNLITSSESPACDLELYCEFPPKGNVGKKTGQSSNSNSRKGARKAKGQQATSQGKVPAEKAKRNSNLSRRDSKSERIEAWR	474

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g00324	474	Gene3D	CRIB domain	109	142	IPR036936	-
	Bach9g00324	474	SMART	RhoGAP_3	172	335	IPR000198	GO:0007165
	Bach9g00324	474	Gene3D	Rho GTPase activation protein	146	343	IPR008936	-
	Bach9g00324	474	Pfam	P21-Rho-binding domain	112	139	IPR000095	-
	Bach9g00324	474	MobiDBLite	consensus disorder prediction	455	474	-	-
	Bach9g00324	474	MobiDBLite	consensus disorder prediction	417	474	-	-
	Bach9g00324	474	MobiDBLite	consensus disorder prediction	1	32	-	-
	Bach9g00324	474	CDD	RhoGAP	175	331	-	-
	Bach9g00324	474	ProSiteProfiles	CRIB domain profile.	113	126	IPR000095	-
	Bach9g00324	474	CDD	CRIB	111	151	-	-
	Bach9g00324	474	MobiDBLite	consensus disorder prediction	357	376	-	-
	Bach9g00324	474	PANTHER	MKIAA1688 PROTEIN	1	437	IPR044785	GO:0005096
	Bach9g00324	474	Pfam	RhoGAP domain	175	310	IPR000198	GO:0007165
	Bach9g00324	474	FunFam	Rho GTPase-activating protein 5	143	336	-	-
	Bach9g00324	474	MobiDBLite	consensus disorder prediction	420	452	-	-
	Bach9g00324	474	SUPERFAMILY	GTPase activation domain, GAP	153	332	IPR008936	-
	Bach9g00324	474	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	158	343	IPR000198	GO:0007165
	Bach9g00324	474	SMART	PBD_5	113	147	IPR000095	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach9g00324	Bach-Chr9	2340151	2342526	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g00324	-		K20642	gmx:100775644	562.377

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach13g01160	13	16066738	16070050	Bach9g00324	9	2340151	2342526	BWGD
	Bach9g00324	9	2340151	2342526	Bach9g00324	9	2340151	2342526	ECH