Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01160 ATGACTGAGGTCCTCCATTCCCCTTCCCATTTTTCTTCATCTCCAAGGAGAGGCTCTTCCTCTTCTTCTTCCTTATCATGTGCGCCTTTACCTTCATTATCGTGCGCACCCCCTTCCGGTGATGGCATTCTCCTTATTAGCGACCAAGAATCTCAGACACCCTCTTCTTCTCTAGCCGAGGACCGTTATTCTACGGCTACCAACTGTGACACAGAGGAGCTCAACGAGAGGGAGAAGCACAGGACTGAACAACTTTCTATTTTGGCGCTTCTTGTTACCCTTTTCAGGAAATCCTTAATTGCTTGTAAGAGTGACAGGAGGGAGCTTTGTGCCATGGATATCGGGTGGCCCACTAATGTGCGCCATATTGCGCATGTCACATTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGTTGAGTTCGAACCTGAAGTACCCAGAAGGCCTCCCAGTGCTAGTACAACTGTTTTTGGAGTTTCAACGGAATCCATGCAGTTATCATATGACACGAGAGGGAACAGTGTGCCAACAATTCTGTTACTAATGCAAAGCCGCTTGTATGCTCAAGGAGGGTTGCAGGCGGAGGGGATTTTCAGAATTAATGCAGAAAATAGTCGAGAGGAATATGTTAGGGACCAATTAAACAGGGGATTGGTCCCGGAAGGCATTGATGTACATTGTTTGGCAGGACTTATCAAGGCTTGGTTTAGGGAACTGCCTGGAGGTGTTCTGGATTCTTTATCACCTGATCAGGTAATGCAGTGCCAGACTGAAGAAGAGTGTGCTGAGCTGGCAAGGCGTCTTCCTCCCACTGAAGCTGCCCTCTTGGACTGGGCCATCAATCTGATGGCTGATGTTGTCCAACATGAACATCTGAACAAGATGAATGCACGCAACATCGCCATGGTTTTTGCACCAAATATGACTCAGATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGATGCTTATATTAAGGACGCTGCGGGAGAGAAAGGATTCTGTTATAGAATCTTCCCCTGGATTCTATTTAGAGCCTTTTGACGAGAATGGGCACCATAGTACTTTGAAGTCTTGCCAGGAGGATACCACGCAAGAAAATGAAGAGACCGAGGAAAAGTTTGTTTTGGAGAAAACTGTCTTAGAATGTTCCCCTGACTTTCTGCAAGACAATAACTTAGCCAGAGGAGAATCTGGCAGTTTGATTACCTCTTCTGAGAGTCCAGTTTGTGATGGGGAGTTGTACTGTGAGTTTCCACCTAAAGGAAATGTTGGGAAGAGTAAGACTGACCAGTCAAGTAATTCAAATTCTAGAAAGGGGGCCAGAAGAGACAGAGGCCAGCAACCCACAAGCCAGGGAAGAGTGCCTGCTGAGAAAGCCAAGGGAATTAGCAACCTAAGCCGCATAGATTCAAGATCGGAGCGGATAGAAGCCTGGCGGTAA 1467 0.4663 MTEVLHSPSHFSSSPRRGSSSSSSLSCAPLPSLSCAPPSGDGILLISDQESQTPSSSLAEDRYSTATNCDTEELNEREKHRTEQLSILALLVTLFRKSLIACKSDRRELCAMDIGWPTNVRHIAHVTFDRFNGFLGLPVEFEPEVPRRPPSASTTVFGVSTESMQLSYDTRGNSVPTILLLMQSRLYAQGGLQAEGIFRINAENSREEYVRDQLNRGLVPEGIDVHCLAGLIKAWFRELPGGVLDSLSPDQVMQCQTEEECAELARRLPPTEAALLDWAINLMADVVQHEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKMLILRTLRERKDSVIESSPGFYLEPFDENGHHSTLKSCQEDTTQENEETEEKFVLEKTVLECSPDFLQDNNLARGESGSLITSSESPVCDGELYCEFPPKGNVGKSKTDQSSNSNSRKGARRDRGQQPTSQGRVPAEKAKGISNLSRIDSRSERIEAWR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01160 488 SUPERFAMILY GTPase activation domain, GAP 153 333 IPR008936 -
Bach13g01160 488 SMART PBD_5 114 148 IPR000095 -
Bach13g01160 488 Gene3D CRIB domain 111 144 IPR036936 -
Bach13g01160 488 CDD CRIB 112 152 - -
Bach13g01160 488 Gene3D Rho GTPase activation protein 147 343 IPR008936 -
Bach13g01160 488 MobiDBLite consensus disorder prediction 429 488 - -
Bach13g01160 488 MobiDBLite consensus disorder prediction 1 78 - -
Bach13g01160 488 FunFam Rho GTPase-activating protein 5 144 337 - -
Bach13g01160 488 Pfam P21-Rho-binding domain 113 139 IPR000095 -
Bach13g01160 488 CDD RhoGAP 176 332 - -
Bach13g01160 488 ProSiteProfiles Rho GTPase-activating proteins domain profile. 159 344 IPR000198 GO:0007165
Bach13g01160 488 Pfam RhoGAP domain 176 310 IPR000198 GO:0007165
Bach13g01160 488 SMART RhoGAP_3 173 336 IPR000198 GO:0007165
Bach13g01160 488 MobiDBLite consensus disorder prediction 45 70 - -
Bach13g01160 488 MobiDBLite consensus disorder prediction 360 380 - -
Bach13g01160 488 ProSiteProfiles CRIB domain profile. 114 127 IPR000095 -
Bach13g01160 488 MobiDBLite consensus disorder prediction 1 30 - -
Bach13g01160 488 PANTHER MKIAA1688 PROTEIN 1 401 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01160 Bach-Chr13 16066738 16070050 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01160 - K20642 gmx:100784019 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01160 13 16066738 16070050 Bach9g00324 9 2340151 2342526 BWGD