Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00152 ATGAGTGACGATGGAGAAAGGACTTGTCCTCTCTGTGCAGAAGAGATGGATTTGACAGATCAGCAGCTGAAACCTTGCAAATGTGGCTATGAGATATGTATTTGGTGTTGGCATCACCTTATGGACATGGCTGAGAAGGCTGAAACAGAGGGACGATGCCCTGCATGTCGAAATCCTTATGACAAGGAAAAAATTGTAGGGATGGCTGCAAGCTGTGAGAGATTGGTTGCTGAAATTCATATGGAGAGAAAGATGAAGAGCCAGAAGGCAAAGTCTAAATCATCTGAAGGACGGAAACAACTCAGCAGTGTGCGAGTGATTCAGCGGAACCTTGTATACATAGTTGGGTTGCCTCTTAATCTTGCAGATGAAGATCTTCTCCAGCAGCGAGAGTATTTTGGTCAGTATGGGAAGGTCATGAAAGTGTCTATGTCTCGGACAGCAGCTGGTGTCATTCAACAGTTTCCGAACAATACTTGTAGTGTATATATTACTTACTCAAAGGAAGAAGAAGCAATTCGTTGTATTAAAAATGTACATGGATTTGTCTTGGAGGGTAGACCATTAAGGGCTTGTTTTGGAACCACAAAGTATTGCCATGCATGGCTACGAAATGTGCCTTGCAGCAATCCGGATTGTTTATATCTGCATGAGATTGGCTCTCAAGAGGATAGTTTCACAAAGGATGAAATTATTTCAGCGTACACTAGAAGTCGAGTTCAACAAATTACTGGTGCTGCAAACAATATGCAGCGGCGTTCAGGGAATGCATTGCCATCTCCAGTTGATGACCACATGAGTAATAACTCAGCAAACCCGATTGTGAAAAATCCTTCTAGTAACTCTTCAGGTATTATGAGAGGTTCACCTCCTAATGGAAGTTCTGGGAGATCTATAGGTCTTCCTGCTGCTGCCGCTTGGGGTACACGAGCTACAAATTCTCAGGCCCCTGCTGATGGTCTCTTATGTTCAAATGGACCATCCAAGCCGATACCTGAAGCAGTTAGTAGCACACTAGCATTTTCTTCAGCTGTTGTAGGCACAACTCAGGCTTCTGCATTACATGGTGACGCAGTGAAGCAGGCATCATCAAGTGATGGAAGTCATAACATGCTGCCAAGAGTTAAAAATGAATCGTTGAAACCAGTTATACAATGCAATGGCATAGATAACCTCAGTAGTGCAGGTGAAAAAACTGTAACTTCTGATGCTTCTTTGCCAAATGGGAATTTGAACAGCCAGTTGTCTTCTCTACCATTATCCAGAGATAGTGACAGAGGCAGTTGTACTACAGCGAATACAAATTCTACTACTGATATCACTGGGCAATCAGGAAGATCTGGTCCTGAGGAGGCAGTTATTGCTACCAATGAAGAGATCCAGAACTTATACTCTGATTTGTCCTCTGTTAATATTGATAGAAATGTCAACAATGAGCATTATAGTACAGCCAGACCTAACAGTCCACCTTCTGATTATGTTTTGATTAAATCTCCTAAAATTCAAGAATTACAACAGCACAGTACTGACAAAATTAGAGATGCAGTGATTACAACTGCAGTTGCTAAAACTGCTACCTCAAATAATGGGGTGTGTATTTCAAAAGAACAGTGTGACTGGAGATTTGATTCTCAAACTCAAGTAGCTTCAGTCACCACTGAAGTTGAAGATGATATAACATCTTTTGATAATCAAAGACTCAAGGATCCTGAAGTAGTTTGTCGTTCTCCTTACTTGCCAAATTCATGTAGTTTCCGACATGTCTCAAACCAATCTAGTCCTCATCTTCTGCAGCATGGTGAAGCTTATGCAGCTTTAAATGTTGGTTCTCTGTCATCTGATGATAAAGTTAGAGATGATTCAATATTACATGTGTCTGACTTATTATGTAATGGTTCCCGTGAGAAATCAGTTAGCAGCAGATCTGGTTTAAACAGCACTAGAGAATGTTCTTTCTTCCTTCAAGATGAAGGAAATGAGCATTGTGTTGGAAGATTAGTTAGTCAACCAGTTAATGCTGGAAATGATGCGGCTCTGGATAAGGGTGAGAGTAGTATAATTTCAAATATATTGTCCATGGACTTTGATCCCTGGGATGACTCACTAACATCACCTCAGAATTTGGCTAAGTTGTTGGGCGACAATAATAACCAGTTTGGTCCATTAAAAAGTTCTAGTTCTTCGAAAGGGCAAAATAACTGTCAATCTAGATTCTCTTTTGCAAGGCAGGAGGAATCCAAATTCCATTCATTGGATTTACAACGTTCATATAGCGTCAATGAGCAATTGCCAAAGAGCCATTCGCTCATCCACGATTTTGCAGGCAGAGACTTGTATGTGGATAAGTTGGGTCTAGTAAAGGCATTTCCTACCAGTAACCTTGAGGAGTCTGAAAGTCTATGCAGTGGTCACTTTGTTGCTTCTTCTAATAAGCATTCTGGATTTTCAGTTCCAAACAGGCCACCACCACCAGGTTTTCCCTCTCAAGAGAGAGTTGAGCAGGCTTTTGACTCCATTACTGGAAATTCCCTGCTAGACTCTTATTCCTTACTGAGAAATTCATATCAGTCACCCACCACTGGATCAATCAGTAGTACTGGGGATATTGAATTCATGGATCCTGCTATTTTGGCTGTGGGTAAGGGGAGACATCAAGGGGCACTAAACAGCCCAGGGTTGGACACTAGATCGAATTTCCCTTCACAATTAAGTTATTTTGAAAACGAGGCCAGACTTCAATTGTTGATGCAAAGATCTCTCTCACCTCAGCAAAACCACAGATTTTCCGAAATTGGGAATACCTTCTCTCACATTGGAGATTCTTATGGAATTTCTTCAAGGTTAGATCAGTCACAAGTCAGCAATTTGGCGCCTTTTGCACAGTTGTCCCCGCAACAATCTAGAAATGCAATTTTGTCAAATGGCCAATGGGATGGGTGGAATGAGGTGCAGAATGGAAATAGTCTGGGTGTGTCTGAACTTCACAGAAATGAAAGACTTGGATTTAATAAGTACTATACTGGATATGAGGATTCAAAATATCGAATGCCAAATGCTGGGGATCTTTACAACAGAACATTTGGGATGTGATCTTGGTGGCTATCTTATGATTCATTGTTGGCCGCGGTGAAGCCAAGTTAGAAATGAACAAGCACAATTATGTTGGGTTGTTGAAGGTGATGGGACTGATTCATGACTGGTCTACAGGCTCACCCAATGATGATACTCCCAAGAAGCACGATTTCTATTCAGAGCTGGAGTGAGCTGTGTTGGGATGTTAAGATAGTCTCCAATGCCAATGAGATGGAACTGGCAGGTAGTTCTTGGTTGAGTATTTTCTCTTAAAATTTACAGAGCAGAAAAACTTGTGGTTGATTCACAATTTGAATAGATGAATCCTCCGTTTGTTGGTATTGTATTTTTCCTTTTAGTTGTAATTACCCTTGTGGATATAATTATGGAGGTTTAACAGGGAATGATTCAACGGAAATTATTTT 3497 0.4098 MSDDGERTCPLCAEEMDLTDQQLKPCKCGYEICIWCWHHLMDMAEKAETEGRCPACRNPYDKEKIVGMAASCERLVAEIHMERKMKSQKAKSKSSEGRKQLSSVRVIQRNLVYIVGLPLNLADEDLLQQREYFGQYGKVMKVSMSRTAAGVIQQFPNNTCSVYITYSKEEEAIRCIKNVHGFVLEGRPLRACFGTTKYCHAWLRNVPCSNPDCLYLHEIGSQEDSFTKDEIISAYTRSRVQQITGAANNMQRRSGNALPSPVDDHMSNNSANPIVKNPSSNSSGIMRGSPPNGSSGRSIGLPAAAAWGTRATNSQAPADGLLCSNGPSKPIPEAVSSTLAFSSAVVGTTQASALHGDAVKQASSSDGSHNMLPRVKNESLKPVIQCNGIDNLSSAGEKTVTSDASLPNGNLNSQLSSLPLSRDSDRGSCTTANTNSTTDITGQSGRSGPEEAVIATNEEIQNLYSDLSSVNIDRNVNNEHYSTARPNSPPSDYVLIKSPKIQELQQHSTDKIRDAVITTAVAKTATSNNGVCISKEQCDWRFDSQTQVASVTTEVEDDITSFDNQRLKDPEVVCRSPYLPNSCSFRHVSNQSSPHLLQHGEAYAALNVGSLSSDDKVRDDSILHVSDLLCNGSREKSVSSRSGLNSTRECSFFLQDEGNEHCVGRLVSQPVNAGNDAALDKGESSIISNILSMDFDPWDDSLTSPQNLAKLLGDNNNQFGPLKSSSSSKGQNNCQSRFSFARQEESKFHSLDLQRSYSVNEQLPKSHSLIHDFAGRDLYVDKLGLVKAFPTSNLEESESLCSGHFVASSNKHSGFSVPNRPPPPGFPSQERVEQAFDSITGNSLLDSYSLLRNSYQSPTTGSISSTGDIEFMDPAILAVGKGRHQGALNSPGLDTRSNFPSQLSYFENEARLQLLMQRSLSPQQNHRFSEIGNTFSHIGDSYGISSRLDQSQVSNLAPFAQLSPQQSRNAILSNGQWDGWNEVQNGNSLGVSELHRNERLGFNKYYTGYEDSKYRMPNAGDLYNRTFGM 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00152 1029 MobiDBLite consensus disorder prediction 398 448 - -
Bach9g00152 1029 Gene3D - 111 192 IPR012677 -
Bach9g00152 1029 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 112 190 IPR000504 GO:0003723
Bach9g00152 1029 CDD RRM_CNOT4 105 204 IPR034261 -
Bach9g00152 1029 MobiDBLite consensus disorder prediction 398 445 - -
Bach9g00152 1029 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 1 1023 IPR039780 GO:0004842|GO:0030014
Bach9g00152 1029 SMART rrm2_1 111 192 IPR003954 GO:0003676
Bach9g00152 1029 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 77 IPR013083 -
Bach9g00152 1029 MobiDBLite consensus disorder prediction 246 300 - -
Bach9g00152 1029 SUPERFAMILY RING/U-box 3 66 - -
Bach9g00152 1029 ProSiteProfiles Zinc finger RING-type profile. 9 57 IPR001841 -
Bach9g00152 1029 FunFam RNA binding (RRM/RBD/RNP motifs) family protein 111 192 - -
Bach9g00152 1029 SUPERFAMILY RNA-binding domain, RBD 104 190 IPR035979 GO:0003676
Bach9g00152 1029 Pfam RING/Ubox like zinc-binding domain 9 61 - -
Bach9g00152 1029 MobiDBLite consensus disorder prediction 246 296 - -
Bach9g00152 1029 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 110 196 IPR000504 GO:0003723
Bach9g00152 1029 MobiDBLite consensus disorder prediction 713 735 - -
Bach9g00152 1029 CDD mRING-HC-C4C4_CNOT4 8 58 IPR039515 -
Bach9g00152 1029 SMART rrm1_1 111 192 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00152 Bach-Chr9 1058233 1064963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00152 K10643 - gmx:100801880 1413.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00152 9 1058233 1064963 Bach13g01322 13 17379614 17387288 BWGD