Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g01322 ATGTTTAATGGTTTGACTAAGCGACACACAGAGAGCGAAGCAGCAGCCAAAAAGTCCATCCAAACAAAGCCTTCTCTCTGTTTTAAAAGACTCCTTGTGGTTTTCTCTGCCTCTCTTACCCTTTGGTCTCTCACTCTCGTTCTGCGTCTTCGTTATCGTGCGCTTCGCAAACAATCTCGTCCTCACAGTTTCGTGTTCTTCTGGATCTCTCAACTGGCAATCATGAGTGACGAAGTAGAAAGGACTTGTCCTCTCTGTGCTGAAGAGATGGATTTGACAGATCAGCAGCTGAAACCTTGCAAATGTGGCTATGAGATATGTGTCTGGTGTTGGCATCATATTATGGACATGGCTGAGAAGGATGAAACAGAGGGGCGATGCCCTGCATGTCGAAATCCTTATGACAAGGAAAAGATTGTAGGGACGGCTGCAAGTTGTGAGAGTAGATTGGTGGCTGAAATTCATATGGAGAGAAAGACAAAGAGCCAGAAAGCAAAGTCAAAATCATCTGAAGGACGGAAACAACTCAGCAGTGTGCGAGTTATCCAGAAGAACCTTGTATACATAGTTGGGTTGCCTCTTAATCTGGCAGATGAAGATCTTCTCCAGCGGCGAGAGTATTTTGGTCAGTATGGGAAGGTCATGAAAGTGTCCATGTCTCGGACAGCAGCTGGTGTCATTCAACAGTTTCCAAACAATACTTGTAGTGTATATATTACTTACTCAAAGGAAGAAGAAGCAATTCGTTGTATTCAAAGTGTACATGGATTTGTCTTGGAGGGTAGACCATTGAGGGCTTGTTTTGGAACCACAAAGTATTGCCATGCATGGCTCCGAAATGTGCCTTGCAGCAATCCAGATTGTTTATATCTGCATGAGATTGGCTGTCAAGAAGATAGTTTCACAAAAGATGAAATAATTTCAGCATACACTAGAAGTCGAGTTCAACAAATCACTGGTGCTGTAAACAATATGCAACGACGTTCAGGGAATGCATTGCCACCTCCAGTTGATGACTACGTGAACAATAATTCAGGAAAACCCATTGTTAAAAATCCTTCGAGTAACTCTTCAAGTATTATGAGAGGTTCACCTCCTGATGGAAGTTCTGGGAGATCTATAGTTCTTCCTGCTGCTGCTGCATGGGGTACACGAGCTACAAATTGTCAGGCCCCTGCTGGAGGTATATTATGTTCAAATGGACCCTCCAAGTCAATACCTGAAGCCGTTAGCAGCACACTAGCATTTTCTTCAGCTGTTGCTGGCACAACTCAGGCTTCTGTATTACATAGTGATGTAACGAAGCGGCCACCATCAAGTGATGGAAGTCAGAATATGCTGCCAAGAGTTAAAAATGAATTGTTGAAACCAGTTAAACAATATAGTGGCATAGATAACCTCGGTAGTGCAGGTGAAAAGACTGTACCTTCTGATGGTTCTCTGCCACATGTGAATTTGAACAGCCAGTTGTCTTCTCGACCATTATCCAGAGATGGTGATGGAGGCAGTTGTACTATAGCAAATACAACCGATTCTACTGACTTGACTGGGCAATCAAGCAGCTGTGGTCCTGAGGAAGTAATTATTGCTACCGATGAAGAGATCCAGAACTTATGCTCTGATTTGTCCACTGTTAATATTGATAGAAATGTCAGCAAAGAACATTATGGTACAGCCAGACCTAACAGTCCATCTTCGGATTATGCCTTGATTAAATCTCCTCGAATTCAAGTATCAGAACAGCTCAATACTGAGAAAATTAGAGATGCGGTGATTGAAACTGTAGCTGCTAAAGCTGCTGCCTCAGATAATGGGGTGTGTGTTTCGAGAGAACACTTTGACTGGAGATTGGATTCTCAAACTCCAGTAGCATCGGTTACCGCTGAAGTTGAAGATGATATAAGATCTTTTGATAATCAAAGACTCAAGGATCCAGAAGTAGTTTCTCATTTTCCTTACTTGCCAAATTCATCTAGTTTCCATCATGTCTCGAACCTCTCTAGTCCTCATCTGCTGCATGGTGAAGTTTATGCAGCTTTAAATGCTGGCTCTCTATCATCTAGTGATAAAGATGATTCTGTATTACATGCATCTAACATGTTATGTAATGGTTTCCCTGAGAAATTGGTCAGCAGTAGTTCTTCTGGTTTAAGTAGTGCTAGGGGATGTTCATACTTTCCTCAAGATGAAGGAAATGAGCATTGCGTTGGAAGATTAGTTAGTGAACCAGTTAATGCTGGAAATGATACTGCTGTGGATAAGGGTGAGAGTAGTATAATTTCAAATATACTGTCCATGGACTTTGATCCCTGGGATGATTCACTCACATCGCCTCAGAATTTGGCTAAGTTGTTGGGCAACAACGATGACCAGTCTGGTCCATCAAAAAAATCTAGTTCTTGGAAAATGCAAAATAACAGTCAGTCTAGGTTCTCTTTTGCAAGGCAAGAGGAATCCAAATTCCATTCATTTGATGCACATCGTTCATATGGTGTCAATGAGCAATTGCCAAAGAACCATTCATTTACCCAGGATTTTACTGAAAGAGACTTGTATATGGATAAGTTGGGTCTGGTAAATGCATTCTCTACCAGGAACCTTGAGGAATCTGAAAATCTAGCCAGCAGTCATTTTGTTGCTTCTCCTAATAAGCTTTCTGCGGTTTCAAGAGCTCAAATTTCAGCTCCTCCAGGATTTTCAGTTCCAAACAGGTCACCACCACCAGGTTTTCCCTCGCAAGAGAGAGTTGAGCAGGGTTTTGACTCCCACCCTGGGAATACCCTGCTCGATCCTTCTTTACTGAGAAATTCATATCAGACCCCCACCACTGGTACAATTGGCAGTTCTGGGGATATTGAATTCATGGATCCTGCTATTTTAGCTGTTGGTAAGGGGAGACTTCAAGGTACACTAAACAGCCCTGGGTTGGACATGAGATCGAATTTCCCTTCACAACTAAATTACTTTGAAAACGAGGCGAGACTTCAATTATTGATGCAAAGATCTCTCTCACCTCAGCAAAACCACAGATTTTCTGAAATTGGGCACACCTTTTCTCAACTTGGGGACTCTTATGGAATTTCTTCAAGATTAGATCAGTCACAAGTAGGCAATTTGGCCCCCTTTGCTCAGTTTTCCTTGCAACAACCTCGAAATGCAATTTTGTCAAATGGCCAATGGGATGGGTGGAATGAGGTCCAGAATGGAAATAGTCTGGGGGTGGCTGAACGTCTGAGAAATGAAAGGCTTGGATTCAACAAGTTTTATACTGGATATGAGGATTCAAAATATCGGGTGCCAAATGGTGGGGATCTTTACAATAAAACATTTGGGATGTGA 3339 0.4226 MFNGLTKRHTESEAAAKKSIQTKPSLCFKRLLVVFSASLTLWSLTLVLRLRYRALRKQSRPHSFVFFWISQLAIMSDEVERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDETEGRCPACRNPYDKEKIVGTAASCESRLVAEIHMERKTKSQKAKSKSSEGRKQLSSVRVIQKNLVYIVGLPLNLADEDLLQRREYFGQYGKVMKVSMSRTAAGVIQQFPNNTCSVYITYSKEEEAIRCIQSVHGFVLEGRPLRACFGTTKYCHAWLRNVPCSNPDCLYLHEIGCQEDSFTKDEIISAYTRSRVQQITGAVNNMQRRSGNALPPPVDDYVNNNSGKPIVKNPSSNSSSIMRGSPPDGSSGRSIVLPAAAAWGTRATNCQAPAGGILCSNGPSKSIPEAVSSTLAFSSAVAGTTQASVLHSDVTKRPPSSDGSQNMLPRVKNELLKPVKQYSGIDNLGSAGEKTVPSDGSLPHVNLNSQLSSRPLSRDGDGGSCTIANTTDSTDLTGQSSSCGPEEVIIATDEEIQNLCSDLSTVNIDRNVSKEHYGTARPNSPSSDYALIKSPRIQVSEQLNTEKIRDAVIETVAAKAAASDNGVCVSREHFDWRLDSQTPVASVTAEVEDDIRSFDNQRLKDPEVVSHFPYLPNSSSFHHVSNLSSPHLLHGEVYAALNAGSLSSSDKDDSVLHASNMLCNGFPEKLVSSSSSGLSSARGCSYFPQDEGNEHCVGRLVSEPVNAGNDTAVDKGESSIISNILSMDFDPWDDSLTSPQNLAKLLGNNDDQSGPSKKSSSWKMQNNSQSRFSFARQEESKFHSFDAHRSYGVNEQLPKNHSFTQDFTERDLYMDKLGLVNAFSTRNLEESENLASSHFVASPNKLSAVSRAQISAPPGFSVPNRSPPPGFPSQERVEQGFDSHPGNTLLDPSLLRNSYQTPTTGTIGSSGDIEFMDPAILAVGKGRLQGTLNSPGLDMRSNFPSQLNYFENEARLQLLMQRSLSPQQNHRFSEIGHTFSQLGDSYGISSRLDQSQVGNLAPFAQFSLQQPRNAILSNGQWDGWNEVQNGNSLGVAERLRNERLGFNKFYTGYEDSKYRVPNGGDLYNKTFGM 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g01322 1112 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 75 1106 IPR039780 GO:0004842|GO:0030014
Bach13g01322 1112 MobiDBLite consensus disorder prediction 480 521 - -
Bach13g01322 1112 MobiDBLite consensus disorder prediction 465 521 - -
Bach13g01322 1112 CDD mRING-HC-C4C4_CNOT4 82 132 IPR039515 -
Bach13g01322 1112 ProSiteProfiles Zinc finger RING-type profile. 83 131 IPR001841 -
Bach13g01322 1112 MobiDBLite consensus disorder prediction 324 372 - -
Bach13g01322 1112 FunFam RNA binding (RRM/RBD/RNP motifs) family protein 186 267 - -
Bach13g01322 1112 CDD RRM_CNOT4 180 279 IPR034261 -
Bach13g01322 1112 MobiDBLite consensus disorder prediction 345 366 - -
Bach13g01322 1112 SMART rrm2_1 186 267 IPR003954 GO:0003676
Bach13g01322 1112 Gene3D - 186 267 IPR012677 -
Bach13g01322 1112 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 185 271 IPR000504 GO:0003723
Bach13g01322 1112 MobiDBLite consensus disorder prediction 786 814 - -
Bach13g01322 1112 SMART rrm1_1 186 267 IPR000504 GO:0003723
Bach13g01322 1112 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 150 IPR013083 -
Bach13g01322 1112 SUPERFAMILY RNA-binding domain, RBD 179 265 IPR035979 GO:0003676
Bach13g01322 1112 MobiDBLite consensus disorder prediction 896 920 - -
Bach13g01322 1112 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 187 265 IPR000504 GO:0003723
Bach13g01322 1112 Pfam RING/Ubox like zinc-binding domain 83 135 - -
Bach13g01322 1112 SUPERFAMILY RING/U-box 77 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g01322 Bach-Chr13 17379614 17387288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g01322 K10643 - gmx:100801880 1447.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00152 9 1058233 1064963 Bach13g01322 13 17379614 17387288 BWGD
Bach13g01322 13 17379614 17387288 Bach13g01322 13 17379614 17387288 ECH