Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00876 ATGCGGGGTTTTCTTCCATTGTTCTTGACCTTAGCCATTGTGCTAGTGCTGGTGACGGTGGTAAGTGGACTCCCGAGGAGTTTTCTCCCTCTTGAACGGGCTATACCTCTAAGTCAGAGAATGGAACTGGAAGAACTGAAAGCTCGCGACCGAGTGAGACATGCTCGAATCTTGCAAGGAGTGGTGGGTGGAGTTGTCGACTTCTCAGTCGAAGGGACCTCCGATCCTTACTCCGTTGGGCTGTATTTTACAAAAGTGAAGCTGGGCTCTCCTCCCAGAGAATTTAACGTTCAGATCGATACTGGCAGTGATATATTGTGGGTTAATTGCAATACCTGCGGTAATTGCCCTCAATCTAGTGGACTAGGGATTGAGCTCAATTTCTATGATACAGCCAGCTCATCCACAGCTGCATTGGTTTCCTGCTCAGGCCCAATATGCTCCGCTGCAGGTCAAAGTGTGGCAGCTGCATGCTCCCCACAAGTTAATCGGTGCAGCTACACCTTTCAATATGGAGATGGAAGCGAGACATCAGGTTATTATGTGTCTGATGCCATGAATTTTGACACGATCCTGGGACAGTCTATGCTTGCTAACTCTTCAGCTACCATTGTTTTCGGGTGTAGCATATATCAGTCTGGTGATTTGACCAAGACAGACAAAGCAGTTGATGGAATTTTTGGGTTTGGCCCTGGTGCTCTATCCATTATATCACAATTGTCAACACAGAGTATAACACCTAGAGTGTTTTCTCATTGCTTGAAAGGAGAGGGAAATGGGGGAGGCATACTAGTTTTGGGTGAGATTTTGGAGCCAAGTATTGTTTATAGTCCACTTGTCCCATCACAGTCTCTTTACAACTTAAATCTGCAGAGCATTGCTGTCAATGACAACTTCTGTGTTATAGTGGATTTTCTTCCACCAGCAGTTAAATCAGTTGATCCTGCCGTATTAGCAACATCAAACAACCGAGGAACTATTATTGATTCTGGTACAACCTTGGCATACCTTGTGCAAGAAGCTTATGATCCTTTTGTCAATGCTATAACCACCACTGTATCACAATCTGCCAGTCCAATTATTTCCAAAGGAAACCAGTGTTATCTGGTCTCACTCAGTATTGGCTATGTATTTCACCAAGTCAGTTTAAACTTTGCCGGTGGAGCATCCATGCTTTTGAAGCCAGAACAGTACCTTATGCATTCAGGTTTTGTTGACGGTGCTGTAATGTGGTGTATTGGTTTCCAGAAAGTGCAGGAGGGACTCACAATTTTAGGAGATCTTGTCCTGAAAGATAAGATTTTTGTCTATGACTTGGCTCATCAACGAATTGGATGGGCTAACTATGATTGTTCCTTGGCTGTAAATGTCTCCGTGACTACAAGCAAGGATGAGTACATCAATGCAGGACACTTGAATCTTAGAGACGAACTTCGTGAGGAGACTTTGCAGCTTGCCAGGGCAAATCTGGAGAAGGAACCTCGTATCATGGAACTTAGGAATCAGTGTAGAATAATTCGGACAACTGAATTAGCTGCTGCTCAAGAGAAACTAAATGAGCTTGAGAAACAGAGAGACGAAACATTGAAGTTCAATTCTCCAGCATCCCTTCTCCAAAGGGTTCAAGAGGCGATGAATAAGACAGACGTGGAATCTGAAAATTTTCATCAGCAACTCCTTGATAGAGAGATTGACATTGGGGCGTTTGTGCAGAAATACAAGAAGCTCCGTACCACTTACCACAAAAAAGCTCTCGTACATTTAGCAGCTAAAACATCAGCTATGTAAGCGCCGCACAACGGATATAAAAAATTTGAAATAACTATTCCTTTTTAGTCCAGGAAACTGATACAGGATCTGCATTTATTTATTATTTCGTTTGTTCTTGTCATTATGAATTATAATCGTCCTCCGTTAAAGATCATAATGCATTGAGAAATGACACACCTTATGTATAGCTTGAGAAGATTCACTGTATAAAACTTTTATCTTATAG 1996 0.4254 MRGFLPLFLTLAIVLVLVTVVSGLPRSFLPLERAIPLSQRMELEELKARDRVRHARILQGVVGGVVDFSVEGTSDPYSVGLYFTKVKLGSPPREFNVQIDTGSDILWVNCNTCGNCPQSSGLGIELNFYDTASSSTAALVSCSGPICSAAGQSVAAACSPQVNRCSYTFQYGDGSETSGYYVSDAMNFDTILGQSMLANSSATIVFGCSIYQSGDLTKTDKAVDGIFGFGPGALSIISQLSTQSITPRVFSHCLKGEGNGGGILVLGEILEPSIVYSPLVPSQSLYNLNLQSIAVNDNFCVIVDFLPPAVKSVDPAVLATSNNRGTIIDSGTTLAYLVQEAYDPFVNAITTTVSQSASPIISKGNQCYLVSLSIGYVFHQVSLNFAGGASMLLKPEQYLMHSGFVDGAVMWCIGFQKVQEGLTILGDLVLKDKIFVYDLAHQRIGWANYDCSLAVNVSVTTSKDEYINAGHLNLRDELREETLQLARANLEKEPRIMELRNQCRIIRTTELAAAQEKLNELEKQRDETLKFNSPASLLQRVQEAMNKTDVESENFHQQLLDREIDIGAFVQKYKKLRTTYHKKALVHLAAKTSAM 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00876 595 FunFam Vacuolar protein-sorting-associated protein 37 homolog 1 519 588 - -
Bach8g00876 595 Coils Coil 471 491 - -
Bach8g00876 595 Pfam Xylanase inhibitor C-terminal 286 447 IPR032799 -
Bach8g00876 595 Pfam Modifier of rudimentary (Mod(r)) protein 474 584 IPR009851 -
Bach8g00876 595 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Bach8g00876 595 PRINTS Pepsin (A1) aspartic protease family signature 423 438 IPR001461 GO:0004190|GO:0006508
Bach8g00876 595 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Bach8g00876 595 ProSiteProfiles VPS37 C-terminal domain profile. 515 595 IPR009851 -
Bach8g00876 595 Pfam Xylanase inhibitor N-terminal 82 267 IPR032861 -
Bach8g00876 595 SUPERFAMILY Endosomal sorting complex assembly domain 534 583 IPR037202 -
Bach8g00876 595 ProSiteProfiles Peptidase family A1 domain profile. 82 447 IPR033121 -
Bach8g00876 595 SUPERFAMILY Acid proteases 77 453 IPR021109 -
Bach8g00876 595 FunFam Aspartic proteinase-like protein 2 269 458 - -
Bach8g00876 595 Gene3D Acid Proteases 269 457 IPR021109 -
Bach8g00876 595 Coils Coil 504 531 - -
Bach8g00876 595 Gene3D Acid Proteases 67 268 IPR021109 -
Bach8g00876 595 CDD pepsin_A_like_plant 82 451 IPR034161 -
Bach8g00876 595 Gene3D Helix hairpin bin 516 586 IPR029012 -
Bach8g00876 595 PANTHER ASPARTYL PROTEASES 13 445 IPR001461 GO:0004190|GO:0006508
Bach8g00876 595 FunFam Aspartic proteinase-like protein 2 65 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00876 Bach-Chr8 5766335 5773403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00876 77 452 Miscellaneous Gene Families AT1G44130 27.089 7.76e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00876 - - qsa:O6P43_006583 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00876 8 5766335 5773403 Bach1g02447 1 35940253 35945510 BWGD
Bach8g00876 8 5766335 5773403 Bach8g00876 8 5766335 5773403 ECH