Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02447 ATGCGGGGTTTTCTTCCCTTCGTCTTGGCCTTAGCCACCGTGCAAGTGTTGGTGTCGGTGGTATACAGTGGATTGCCGGGGAGTGTTCTCCGTCTTGAACGGGCTATACCGCTAAGTCAGCCAGTGGAATTGGAAGCACTGAGAGCTCGCGACCGAGTGAGACATGCTCGAATCTTGCAAGGAGTTGTGGGTGGTGTTGTCGACTTCTCAGTCGAAGGGACTTCGGATTACAACGTTGGGCTGTATTATACAAAAGTGAAGCTGGGCTCTCCTTCCAGAGAATTTAACGTTCAGATCGATACTGGCAGTGATATCTTGTGGGTTAATTGCAATACTTGCGGTAATTGCCCTCCATCTAGTGGATTAGGGATTGAGCTCAATTTCTATGATACAGCCAGCTCATCCACGGCTGCACTGATTTCCTGCTCAGATCCACTATGCTCGGCTGCAGGTCAAAGTGCGGCAACTGAATGCTCCCCACAGATTAATCAGTGCAGGTACACCTTTCAGTATGGAGATGGAAGCGGGACAACAGGTTATTATGTATCTGATGCCATGCATTTTGACACGATCCTGGGACAGTCTATGGTTGCTAACTCTTCAGCTACCATTGTTTTTGGGTGTAGCACCTATCAATCGGGAGATTTGACCAAGACAGACAAAGCCGTTGATGGAATTTTTGGGTTTGGCCCTGGTGCTCTATCACTTATATCACAATTATCATCACGTGGTATAACACCCAAAGCGTTCTCTCATTGCTTAAGAGGAGAGGGAAATGGAGGAGGCATACTAGTTCTGGGTGAGATTTTGGAGCCAAGTACTGTTTATAGTCCACTTGTCCCATCACAGCCCCATTACAACTTAAATCTGCAGAGCATTGCTGTCAATGGGCAACATCTGCCAGTTGACCCAGCTGTATTTTCAACATCAAACAACCGAGGAACTATAGTTGATTCTGGTACAACCTTGGCATACCTTGTGCAAGAAGCTTATGATCCACTTGTCAACGCTATAACCACCATTGTATCAAAATCTGCCAGTCCAATTATTTCCAAAGGAAGCCAGTGTTATATGGTCTCATTCAGTATTGCTGATGCATTTCCTCAAGTTAGTTTAAACTTTGCGGGTGGAGCATCCATGGTTTTAAAGCCAGAACAGTACCTTATGCCTTCAGGCTTCCATGATGGTGCTGCAATGTGGTGTATTGGTTTCCAAAAAGTGCAGGAGGGAGTCTCAATTTTAGGAGATCTTGTCCTGAAAGATAAGATTTTCGTCTATGACCTGGCTCGGCAGCGAATTGGATGGGCTAACTATGATTGTTCCATGGCTGTAAATGTCTCTGTGACTACAAGCAAGGATGAGTACGTCAATGCAGGACAGTTGAGTGTGAGCTGCTCACAGGGCAATGTAAAAGGTGTCCAAGCAACAACGCCCAGATGGAACAGGCCCAATACTCGGCCCATTTAA 1467 0.4622 MRGFLPFVLALATVQVLVSVVYSGLPGSVLRLERAIPLSQPVELEALRARDRVRHARILQGVVGGVVDFSVEGTSDYNVGLYYTKVKLGSPSREFNVQIDTGSDILWVNCNTCGNCPPSSGLGIELNFYDTASSSTAALISCSDPLCSAAGQSAATECSPQINQCRYTFQYGDGSGTTGYYVSDAMHFDTILGQSMVANSSATIVFGCSTYQSGDLTKTDKAVDGIFGFGPGALSLISQLSSRGITPKAFSHCLRGEGNGGGILVLGEILEPSTVYSPLVPSQPHYNLNLQSIAVNGQHLPVDPAVFSTSNNRGTIVDSGTTLAYLVQEAYDPLVNAITTIVSKSASPIISKGSQCYMVSFSIADAFPQVSLNFAGGASMVLKPEQYLMPSGFHDGAAMWCIGFQKVQEGVSILGDLVLKDKIFVYDLARQRIGWANYDCSMAVNVSVTTSKDEYVNAGQLSVSCSQGNVKGVQATTPRWNRPNTRPI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02447 488 FunFam Aspartic proteinase-like protein 2 269 447 - -
Bach1g02447 488 Gene3D Acid Proteases 67 268 IPR021109 -
Bach1g02447 488 Pfam Xylanase inhibitor N-terminal 82 267 IPR032861 -
Bach1g02447 488 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Bach1g02447 488 PRINTS Pepsin (A1) aspartic protease family signature 412 427 IPR001461 GO:0004190|GO:0006508
Bach1g02447 488 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Bach1g02447 488 FunFam Aspartic proteinase-like protein 2 66 268 - -
Bach1g02447 488 Pfam Xylanase inhibitor C-terminal 285 436 IPR032799 -
Bach1g02447 488 SUPERFAMILY Acid proteases 75 443 IPR021109 -
Bach1g02447 488 ProSiteProfiles Peptidase family A1 domain profile. 82 436 IPR033121 -
Bach1g02447 488 PANTHER ASPARTYL PROTEASES 38 434 IPR001461 GO:0004190|GO:0006508
Bach1g02447 488 CDD pepsin_A_like_plant 82 440 IPR034161 -
Bach1g02447 488 Gene3D Acid Proteases 269 447 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02447 Bach-Chr1 35940253 35945510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02447 77 441 Miscellaneous Gene Families AT1G44130 26.913 6.89e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02447 - - qsa:O6P43_006583 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00876 8 5766335 5773403 Bach1g02447 1 35940253 35945510 BWGD
Bach1g02447 1 35940253 35945510 Bach1g02447 1 35940253 35945510 ECH