Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach8g00215 CTCTCTCACCCTCTTATCCGCAGCCTTTCAAACCCTAGAAATCCTCGAAGTTCGAGCTATATAATCCTCAAGAAGCTCTATTTTTTTTTGAGGATTTTGAGGTTGTGGACTGTATGTGAGTTCAGATTCGGAGATGAGGCTGGGGGGAGTTTGTATGGTTGAGTTCTAATTTGTCTCAGTTGGTAGAATTAGAAGTTCTGTGCTCATTTACCGTGTGGTGTCGTGTACTTGTATCTGAAGATCGGTGTTTACAGATCTAAATTACTGACGTGGTTTCAGATTTGAACACTCGCTATGTCTTCTTTGAGCAGAGAATTGGTATTTCTCATACTCCAATTTCTGGAGGAGGAGAAGTTCAAAGAATCGGTGCACAAGCTTGAGAAAGAATCTGGGTTTTTCTTCAACATGAAGTACTTTGAGGAGAAAGTTCAAGCTGGAGAATGGGAAGAAGTGGAAAAGTACTTGTCAGGGTTTACCAAAGTTGACGATAATAGATACTCCATGAAGATATTCTTTGAAATCAGGAAACAGAAATATCTGGAAGCGCTTGATCGGCAAGACAAGCCAAAAGGTGTTGAGATATTAGTTAGTGACTTGAAAGTGTTCTCCACTTTTAATGAGGAACTATACAAGGAAATTACGCAGCTGCTGACCCTTAATAATTTCAGGGAGAATGAGCAGTTATCCAAGTATGGTGACACCAAAACTGCTCGGAGCATTATGTTGATAGAGCTTAAAAAACTAATAGAAGCAAATCCACTTTTCCGTGATAAGCTTGTTTTCCCTACTCTTAAGTCATCAAGATTGCGGACATTAATCAATCAAAGTTTGAACTGGCAGCACCAGCTTTGCAAAAACCCGAGGCCAAACCCAGATATTAAAACTTTATTCACTGATCACACTTGTACACCTACTAATGGTCCTCTGGCACCTACACCTGTCAATCTTCCCATTGCTGCTGTCGCAAAGCCTGCTGCCTATACTTCACTTGGAGCTCATGGTCCCTTCCCACCTGCTGCAGCATCTGCTAATGCTAATGCCTTAGCTGGTTGGATGGCCAATGTCTCTGCTTCATCATCTGTCCAAGCAGCTGTTGTCACTGCATCATCCATACCAGTTCCACAGAATCAAGCAATTTCTATCTTGAAGCGTCCAAGAACACCTCCAGCGACTCCGCTTATGGTTGATTATCAGAATCCTGAGCATGAACAGCTAATGAAAAGGCTTCGACCTGCACATTCTGTAGAGGAGGTTTCCTATCCTTCAGCTCGTCAAGCTTCTTGGTCGGTGGATGATCTGCCAAGAACAGTGGCTGTGACTTTACATCAGGGAGCCTCTGTGACAAGCATGGATTTTCATCCTTCTCACCATACATTACTTCTTGTTGGTACAAATACTGGTGAAATTACCCTTTGGGAACTTGGGTTGCGGGACAAGTTGCTCTCAAAGCCATTCAAGATATGGGAAATCTCAGCATGCTCATTGGCATTTCAGGCAGCCGTTGTCAAAGATGCACCAATTTCTGTCAGCCGTGTTACATGGAGCCCAGATGGAAATTTTGTGGGTGTTGCATTTACCAAACATTTGATTCACTTGTATGCATACACTGGATCAAATGAGCTAAGTCAGCGTTTGGAGATTGATGCCCACACTGGGTGTGTTAATGACCTGGCCTTTGCACATCCAAATAAACAACTATGTATTGTGACCTGTGGGGATGATAAGTTGATAAAGGTATGGGAGTTAACTGGACGAAGACTATTTAACTTTGAGGGGCATGAGGCACCTGTATATTCAATCTGTCCTCATCATAAAGAGAACATTCAGTTCATATTTTCAACAGCCATAGATGGCAAAATAAAGGCGTGGCTGTATGATAACATGGGCTCCAGAGTTGACTATGATGCCCCTGGTCACTGGTGTACTACAATGCTTTACAGTGCTGATGGAAGCAGATTGTTTTCTTGTGGGACAAGTAAAGATGGAGACTCTTTCCTCGTTGAATGGAATGAAAGTGAAGGAGCCATTAAGAGGACGTATAATGGATTCAGAAAGAAATCTGCTGGTGTTGTGCAGTTTGACACAACCCAAAATCGCTTTTTGGCTGCAGGTGAAGATGGGCAAATAAAGTTTTGGGATATGGACAGTGTTAATCTTCAAAATAGCACTGATGCAGAGGGTGGACTAACGAACCTTCCGCGCTTGAGATTCAATAAGGAGGGAAATCTGCTTGCTGTTACTACCGTGGACAATGGATTCAAGATACTTGCTAATGCTACTGGTTTTAGATCTTTAAGAGCACTTGAAACTCCAGCCTTTGAAGCACTAAGGTCGCCCATGGAATCATCTGCAATCAAGGTATCTGGCTCTTCTGCTGTTAATGTTAGTCCTGTCAACTGCAAAGTGGAAAGGAGCTCCCCTGTCAGGCCGTCTCCAATTCTTAATGGAGTTGATCCCCCTGGTCGAAGTGTGGAGAAACCTAGAACCATGGAAGACGTAATAGACAGAACTAAACCATGGCAACTTTCTGAAATCATGGATGCCGCCCAATGTCGGTTAGTTACAATGCCAGACAACACAGATATTTCCAGCAAGGTAGTTAGGCTTTTATATACAAATTCTGGTGTTGGTGTTTTGGCACTTGGTTCAAATGGAATTCAGAAGCTGTGGAAGTGGGCTCGCAATGAACAGAATCCCAGTGGAAAGGCCACTGCCAGTGTTGTTCCACAGCATTGGCAACCAAACAGTGGTCTTCTTATGACTAATGATATCTCAGGTGTCAACCTAGAAGAAGCAGTTCCCTGCATTGCACTCTCAAAGAATGACTCCTATGTTATGTCTGCCTGCGGTGGAAAGGTTTCATTATTTAACATGATGACATTCAAGGTAATGACAACATTCATGCCACCACCTCCTGCCTCTACCTTCCTAGCTTTCCATCCCCAGGATAACAACATTATAGCCATTGGAATGGAGGATTCAACCATTCACATTTATAATGTTAGAGTGGATGAGGTAAAATCGAAGTTGAAAGGTCATCAGAAGCGAATTACTGGTTTAGCTTTTTCAACTAATCTTAACATCCTGGTTTCATCGGGCGCTGATGCTCAACTGTGTGTGTGGAGCATTGATACATGGGAAAAGAGGAAATCTATAGCGATACAGTTGCCTGCAGGAAAGACATCTGTTGGTGATACTCGAGTGCAGTTTCATTCTGATCAACTCCGCTTATTGGTAGTCCATGAGACTCAGTTAGCAATATATGATGCCTCTAAGATGGATCGTATTCGGCAGTGGGTTCCACAAGATGTTCTGTCTGCTCCCATATCATATGCAACTTATTCTTGCAACAGTCAGTTGATAGTCACTAGCTTCTGCGATGGTAACATTGGGGTTTTTGATGCTGATAGCTTGAGACTAAGATGCCGTATTGCTCCAACAGCATATTTGTCACAGGCAGCTTTAAGTGGAAGCCAAGCAGTGTACCCTCTTGTTGTTGCGGGGCATCCACTAGAGGCTAACCAATTTGCTGTGGGGCTATCTGATGGGTCCGTCAAAGTGATCGAACCCACGGAATCAGAGGGTAAGTGGGGGTCAACTCCTCCTGTGGATAATGGTATTTTAAATGGTAGGACGGCATCATCATCTACAACAAGCAACCACACGCCTGATCAGACACAAAGATAAACAAACATTCATTGTAATGTATACTAGAGCACTTCTTTCCATCTGTATTTTATCAGCCAACCTAGATTTTTAGGTTCCCATTCCTCCATTGGTCCCCCATCAAGTTTCTTCTTGGACATGAAATGGTAAATGTTTAGATGCACACCACTTGAATTTATTCTAGTCAACTCATAGTTGCTGTATTTTAGTTTTTAATAATTTTTTTTTCCTTGTAAGAATTTGAATCTATTAATTCTGATTCTATCTTGTATATATTTATATAATCTCTAGTTGGTT 3963 0.4237 MSSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKGVEILVSDLKVFSTFNEELYKEITQLLTLNNFRENEQLSKYGDTKTARSIMLIELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCTPTNGPLAPTPVNLPIAAVAKPAAYTSLGAHGPFPPAAASANANALAGWMANVSASSSVQAAVVTASSIPVPQNQAISILKRPRTPPATPLMVDYQNPEHEQLMKRLRPAHSVEEVSYPSARQASWSVDDLPRTVAVTLHQGASVTSMDFHPSHHTLLLVGTNTGEITLWELGLRDKLLSKPFKIWEISACSLAFQAAVVKDAPISVSRVTWSPDGNFVGVAFTKHLIHLYAYTGSNELSQRLEIDAHTGCVNDLAFAHPNKQLCIVTCGDDKLIKVWELTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDGQIKFWDMDSVNLQNSTDAEGGLTNLPRLRFNKEGNLLAVTTVDNGFKILANATGFRSLRALETPAFEALRSPMESSAIKVSGSSAVNVSPVNCKVERSSPVRPSPILNGVDPPGRSVEKPRTMEDVIDRTKPWQLSEIMDAAQCRLVTMPDNTDISSKVVRLLYTNSGVGVLALGSNGIQKLWKWARNEQNPSGKATASVVPQHWQPNSGLLMTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTNLNILVSSGADAQLCVWSIDTWEKRKSIAIQLPAGKTSVGDTRVQFHSDQLRLLVVHETQLAIYDASKMDRIRQWVPQDVLSAPISYATYSCNSQLIVTSFCDGNIGVFDADSLRLRCRIAPTAYLSQAALSGSQAVYPLVVAGHPLEANQFAVGLSDGSVKVIEPTESEGKWGSTPPVDNGILNGRTASSSTTSNHTPDQTQR 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach8g00215 1130 SMART ctlh 34 92 IPR006595 -
Bach8g00215 1130 Gene3D - 303 534 IPR015943 GO:0005515
Bach8g00215 1130 FunFam TOPLESS-related 3 403 699 - -
Bach8g00215 1130 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Bach8g00215 1130 MobiDBLite consensus disorder prediction 1093 1130 - -
Bach8g00215 1130 ProSiteProfiles Trp-Asp (WD) repeats profile. 593 624 IPR001680 GO:0005515
Bach8g00215 1130 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1114 IPR027728 GO:0006355
Bach8g00215 1130 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Bach8g00215 1130 MobiDBLite consensus disorder prediction 705 728 - -
Bach8g00215 1130 SUPERFAMILY WD40 repeat-like 968 1093 IPR036322 GO:0005515
Bach8g00215 1130 ProSiteProfiles Trp-Asp (WD) repeats profile. 912 953 IPR001680 GO:0005515
Bach8g00215 1130 MobiDBLite consensus disorder prediction 1107 1130 - -
Bach8g00215 1130 FunFam Topless-related protein 3 731 965 - -
Bach8g00215 1130 Pfam WD domain, G-beta repeat 911 944 IPR001680 GO:0005515
Bach8g00215 1130 Pfam WD domain, G-beta repeat 449 482 IPR001680 GO:0005515
Bach8g00215 1130 ProSitePatterns Trp-Asp (WD) repeats signature. 470 484 IPR019775 -
Bach8g00215 1130 Gene3D - 535 673 IPR015943 GO:0005515
Bach8g00215 1130 SMART Lish 4 36 IPR006594 GO:0005515
Bach8g00215 1130 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 488 1041 IPR011047 -
Bach8g00215 1130 ProSiteProfiles Trp-Asp (WD) repeats profile. 449 484 IPR001680 GO:0005515
Bach8g00215 1130 Gene3D - 799 1091 IPR015943 GO:0005515
Bach8g00215 1130 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 912 947 - -
Bach8g00215 1130 SMART WD40_4 1000 1036 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 529 572 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 397 436 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 440 483 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 823 859 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 336 375 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 485 526 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 575 615 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 1050 1091 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 862 902 IPR001680 GO:0005515
Bach8g00215 1130 SMART WD40_4 905 944 IPR001680 GO:0005515
Bach8g00215 1130 SUPERFAMILY WD40 repeat-like 337 528 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach8g00215 Bach-Chr8 1411128 1419869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach8g00215 448 657 Miscellaneous Gene Families AT5G08390 23.944 6.19e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach8g00215 - - gmx:100793575 2040
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00215 8 1411128 1419869 Bach1g03179 1 41132541 41141068 BWGD
Bach8g00215 8 1411128 1419869 Bach8g00215 8 1411128 1419869 ECH