Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g03179 ATGTCTTCTTTGAGCAGAGAATTGGTGTTTCTCATACTCCAATTTCTCGAGGAGGAGAAGTTCAAAGAGTCGGTGCACAAGCTAGAGAAGGAATCTGGGTTTTTCTTCAACATGAAGTACTTTGAGGAAAAAGTTCAGGCTGGAGAATGGGAAGAAGTTGAGAAGTACTTGTCAGGGTTTACCAAAGTTGATGATAATAGATACTCCATGAAGATATTCTTCGAAATCAGGAAACAAAAATATCTGGAAGCGCTTGATCGGCAAGACAAGGCAAAGGCTGTTGAGATATTAGTGAATGATTTGAAAGTGTTCTCCACTTTTAACGAGGAACTATACAAGGAAATTACGCAGCTGTTAACACTTACTAATTTCAGGGAGAATGAGCAGTTATCCAAGTATGGTGACACCAAAACTGCTCGTAGCATCATGTTGATAGAGCTTAAAAAACTCATTGAAGCAAACCCACTTTTCCGTGATAAGCTTGTCTTCCCTACTCTTAAGTCATCAAGATTGCGGACCTTAATCAATCAAAGTTTGAACTGGCAGCACCAGCTTTGCAAAAACCCAAGGCCAAACCCAGATATTAAAACTTTATTCACAGATCACACCTGCTCAACTCCTAATGGTCCTCTGGCACCATCACCTGTCAATCTTCCTATTGCTGCTGTTGCAAAGCCTGCTGCTTATACTTCACTTGGAGCTCATGGTCCATTCCCACCGGCTGCAGCAACTGCAAATGCTAATGCTTTAGCTGGTTGGATGGCCAATGCCTCTGCTTCATCATCTGTCCAAGCAGCTGTTGTCACTGCATCATCCATGCCAGTCCCACAAAATCAAGTTTCTATTTTGAAGCATCCAAGAACACCTCCAGCAACTCCTGGAATGGTTGACTATCAGAATCCTGATGAACAACTAATGAAAAGGCTTCGACCTGCTCATTCTGTAGAGGAGGTTTCCTATCCTTCTGCTCGTCAAGCTTCTTGGTCGGTGGATGATCTACCAAGAACAGTGGCTATGACCTTACATCAGGGAACCTCTGTGACAAGCATGGATTTTCATCCTTCTCACAACACATTGCTTCTTGTTGGTACAAATTCTGGTGAAATTACCCTCTGGGAACTTGGCTTGCGGGACAGGTTGCTTTCAAAGCCATTCAAGATATGGGATATTGCAGCATGCTCATTGGCATTTCAGGCAGCTGTTGTCAAAGATGCACCAATTTCAGTTGGCCGTGTTACATGGAGCCCGGATGGAAATTTTGTGGGTGTTGCATTTACCAAACATTTGATTCATTTGTATGCATACACGGGATCTAATGAGCTAAGCCAGCCTTTAGAGATTGATGCCCATACTGGTGGTGTTAATGACTTGGCCTTTGCACATCCAAATAAACAACTATGTATTGTGACCTGTGGAGATGATAAATTGATAAAGGTGTGGGACCTAACTGGACGAAGACTATTTAACTTTGAGGGGCATGAGGCACCTGTATATTCTATCTGTCCTCATCACAAAGAGAACATTCAGTTCATATTTTCAACTGCCATAGATGGCAAAATAAAGGCATGGTTGTATGATAACATGGGTTCCAGAGTTGACTATGATGCCCCTGGTCACTGGTGTACTACAATGCTTTACAGTGCTGATGGAAGCAGATTGTTTTCTTGTGGGACAAGTAAGGATGGAGACTCTTTTCTAGTTGAATGGAATGAAAGTGAAGGAGCCATTAAGAGGACGTATAATGGATTCAGAAAGAAATCTGCTGGTGTTGTGCAGTTTGACACAACCCAAAATCGCTTATTGGCTGCTGGTGAAGATGGGCAAATAAAGTTTTGGGATATGGACAGTGTTAATCTTCTAAATAGCATTGATGCGGAGGGTGGACTAACGAACCTTCCACGCTTGAGATTCAATAAGGAGGGTAATCTGCTTGCTGTTACTACTTTGGACAATGGATTCAAGATACTTGCTAATGCTGCTGGTCTTAGATCTTTAAGAGCAATTGAAACTCCAGCCTTTGAAGCATTGAGGTCGCCCTTGGAATCATCTGCAATCAAGGTATCTGGCTCTTCAGCCGTTAATGTTAGTCCTGTCAACTGTAAAGTGGAAAGGAGCTCCCCTGTCAGGCTGTCTCCAGTTCTTAACGGAGTTGATCCCCCGGCTCGAAGTGTGGAAAAACCAAGAACCATGGATGACGTAATAGATAGAGCAAAACCATGGCAACTATCTGAAATCATGGATGCTGTCCAATGTCGGTTAGTTACAATGCCTGACAGCACGGATGCTTCCAGCAAGGTAGTTCGGCTTTTATATACAAATTCTGGTGTTGGTGTTTTGGCACTTGGGTCAAATGGAATTCAGAAGCTGTGGAAGTGGACTCGCAATGAACAGAATCCCAGTGGGAAGGCCACTGCCGGTGTTGTTCCACAGCATTGGCAACCAAATAGTGGTCTTCGTATGACTAATGATATCTCAGGTGTCAACCTTGAAGAAGCAGTTCCGTGCATTGCCCTCTCAAAGAATGACTCATATGTTATGTCTGCCTGTGGTGGAAAAGTTTCGTTATTTAACATGATGACATTCAAGGTAATGACAACATTCATGCCACCACCTCCTGCATCTACCTTCCTAGCTTTCCACCCCCAGGATAACAACATCATAGCCATTGGAATGGAGGATTCAACCATTCACATTTATAATGTTAGAGTGGATGAGGTAAAATCAAAATTGAAGGGTCACCAGAAGCGAATTACTGGTTTAGCTTTTTCAACCAATCTTAACATCCTGGTTTCATCTGGTGCTGATGCACAACTTTGTGTGTGGAGCATTGATACATGGGAGAAGAGGAAATCTATGACTATACAATTACCTGCGGGAAAGGCTCCTGTTGGTGATACTCGAGTGCAGTTTCATTCTGATCAACTCCGCATGTTGGTGGTCCATGAGACTCAGTTGGCAATATATGATGCCTCTAAGATGGATCGTATTCGGCAGTGGGTTCCACAAGATGTTCTGCTTGCTCCCATATCATATGCAGCTTATTCTTGCAACAGTCAATTAATAATTGCTACCTTCTGCGATGGTAACATTGGGGTTTTTGATGCTGATAGCTTGAGACTAAGATGCCGTATTGCTCCATCGGCATATTTATCACAGGCAGCTTTAAATGGAAGCGAAGCCTTGCACCCTCTTGTTGTTGCGGCACATCCACTAGAGCCTAACCAATTTGCTATTGGGCTAAGTGATGGGTCCGTCAGAGTGATCGAACCCACGGAATCAGAGGGTAAGTGGGGATCAACTCCTCCCATGGATAATGGTATTTTAAATGGTAGGACGGGATCATCATCTACAACAAGCAACCACACACCTGATCAGACACAGAGATAAGCAAACATTCATTGTAATATATTCTAGCATAGCTCTTCCAATCTGTATTTTATCAGCCTAGATTCTTAGGTTTTCATTCCTCCCCCCATTCTTCATACATAAATTTAATTTATTCTATTTCAGTCATAATTTGTATTGTTTATTTTTTCCTTGTAAGAATGTGAATCTATTAATTCTGCTTCCATCTTGTATGTATAAAATCTGTAGTTGGTTACCCAGTTGAATTGTATATGTAAATTGCTGCTTTTAGAAATTATTTCCCCATTCAGAGAGTTGATAAATGGGGTACGG 3678 0.4231 MSSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDRQDKAKAVEILVNDLKVFSTFNEELYKEITQLLTLTNFRENEQLSKYGDTKTARSIMLIELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCSTPNGPLAPSPVNLPIAAVAKPAAYTSLGAHGPFPPAAATANANALAGWMANASASSSVQAAVVTASSMPVPQNQVSILKHPRTPPATPGMVDYQNPDEQLMKRLRPAHSVEEVSYPSARQASWSVDDLPRTVAMTLHQGTSVTSMDFHPSHNTLLLVGTNSGEITLWELGLRDRLLSKPFKIWDIAACSLAFQAAVVKDAPISVGRVTWSPDGNFVGVAFTKHLIHLYAYTGSNELSQPLEIDAHTGGVNDLAFAHPNKQLCIVTCGDDKLIKVWDLTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRLLAAGEDGQIKFWDMDSVNLLNSIDAEGGLTNLPRLRFNKEGNLLAVTTLDNGFKILANAAGLRSLRAIETPAFEALRSPLESSAIKVSGSSAVNVSPVNCKVERSSPVRLSPVLNGVDPPARSVEKPRTMDDVIDRAKPWQLSEIMDAVQCRLVTMPDSTDASSKVVRLLYTNSGVGVLALGSNGIQKLWKWTRNEQNPSGKATAGVVPQHWQPNSGLRMTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTNLNILVSSGADAQLCVWSIDTWEKRKSMTIQLPAGKAPVGDTRVQFHSDQLRMLVVHETQLAIYDASKMDRIRQWVPQDVLLAPISYAAYSCNSQLIIATFCDGNIGVFDADSLRLRCRIAPSAYLSQAALNGSEALHPLVVAAHPLEPNQFAIGLSDGSVRVIEPTESEGKWGSTPPMDNGILNGRTGSSSTTSNHTPDQTQR 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g03179 1128 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 910 945 - -
Bach1g03179 1128 Gene3D - 558 670 IPR015943 GO:0005515
Bach1g03179 1128 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Bach1g03179 1128 FunFam TOPLESS-related 3 401 697 - -
Bach1g03179 1128 Pfam WD domain, G-beta repeat 447 481 IPR001680 GO:0005515
Bach1g03179 1128 Pfam WD domain, G-beta repeat 909 942 IPR001680 GO:0005515
Bach1g03179 1128 ProSiteProfiles Trp-Asp (WD) repeats profile. 591 622 IPR001680 GO:0005515
Bach1g03179 1128 SUPERFAMILY WD40 repeat-like 830 1090 IPR036322 GO:0005515
Bach1g03179 1128 ProSiteProfiles Trp-Asp (WD) repeats profile. 447 482 IPR001680 GO:0005515
Bach1g03179 1128 Gene3D - 763 1100 IPR015943 GO:0005515
Bach1g03179 1128 ProSiteProfiles Trp-Asp (WD) repeats profile. 910 951 IPR001680 GO:0005515
Bach1g03179 1128 SMART ctlh 34 92 IPR006595 -
Bach1g03179 1128 FunFam Topless-related protein 3 729 963 - -
Bach1g03179 1128 ProSitePatterns Trp-Asp (WD) repeats signature. 468 482 IPR019775 -
Bach1g03179 1128 Gene3D - 312 533 IPR015943 GO:0005515
Bach1g03179 1128 MobiDBLite consensus disorder prediction 1091 1128 - -
Bach1g03179 1128 SUPERFAMILY WD40 repeat-like 319 654 IPR036322 GO:0005515
Bach1g03179 1128 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Bach1g03179 1128 SMART Lish 4 36 IPR006594 GO:0005515
Bach1g03179 1128 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1110 IPR027728 GO:0006355
Bach1g03179 1128 ProSitePatterns Trp-Asp (WD) repeats signature. 600 614 IPR019775 -
Bach1g03179 1128 SMART WD40_4 817 857 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 998 1034 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 903 942 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 334 373 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 573 613 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 527 570 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 438 481 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 483 524 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 1048 1089 IPR001680 GO:0005515
Bach1g03179 1128 SMART WD40_4 860 900 IPR001680 GO:0005515
Bach1g03179 1128 MobiDBLite consensus disorder prediction 1105 1128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g03179 Bach-Chr1 41132541 41141068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g03179 428 657 Miscellaneous Gene Families AT5G08390 22.747 2.31e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g03179 - - gmx:100793575 2036.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g00215 8 1411128 1419869 Bach1g03179 1 41132541 41141068 BWGD
Bach1g03179 1 41132541 41141068 Bach1g03179 1 41132541 41141068 ECH