Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00819 ATGGGGAAGACGAAGCCGGAAAACAAAAAGGCTTGGGAGAGACCATCGGAGTCATCATCATCCGATATCTTTCTCTCTCTCAAAAGTTTCTGCCTTTCAAAGAATCTAGGGTTTTGGAACAGTGAATCTTTTGTATCAGCAGATGGGAAAGTTCAGCTGACGCTTTCAAAGACAAGGGGAAAGTCAATCCTTACTGATATGGCAACTGAGAGTCCAATTAGAATTTCAGAAGCTGGGGGAAAGTGGTCCTCCCTTAAAGAAGCTGCAAGTTATGGTTCACCATCTCGAAACATGGCTGCAGAGGATTTGGGCATGCGTTTGAAGGGTCATAGGTTCCATGTCAATGGAAAGGATGTGGTTCCCAATCGAAGTGGCAGCGCACCCCCAAGCATGGAAGGTTCATTTCATGCCATAGAAAACCTATTATCCCGGCAGAACACCGTCCAGAACACAAGTTTGGAAAATCTGAATAGATCTATGAAAAAATATGATTGTAATAAAGGTTCTCTACAATTGCCGCAAGGGACTCTTTCAACACACAAGGAGGAGCCTGGGGATGATCAATCACCCTTGCAACCAGAGTTAGATAAGACAAATGGAATTTGGCATAGACAGGATATAGATTCACTGGCATCACAATACAAAAATGTGGTTGATTTAATTCAGCAAGATTTTCCACGAACTCCATCACCTGTATATAGTAAGTCTATCACCCAAAGTCATGGAATGCCAGAGGAAGCAGTTGATTTAGATGACAGTTCTTCTCATGATCCCCCTGTCACCACACTAGATGCTGCTAAATCTACTAATACTGCTGAAGACACAAGGGTGTCATCAACTGCTGGTACCCCAGCCCCCCTTGCAAGCTCATCATCACTGGGATCCACAAGCAGCATGGGTTTGAAGGGTTTAGATGTTACAATGGTTGAATCTCAACTGATGGCTGTTAATATATCTAATGTACCAAGATCAGAAAGCCAGAAATATGAAGAAAAATGGAAGCACAACTCTCAGAATAATTTGATGATGCACCAAATACACCAGCAGCAAATTAATCCAAATGAAGCTCCTAGCACCGATTCTCAAGGAGTAAAATGTGCGTATGTTTCTATGGACCAATTTCCTCATAAACCCAGCAAGTTTTCTGATGTTCAGCCACTATTGCAGTCATCAGGGCTTACACCTCCATTATATGCCACAGCAGCAGCTTATATGACCTCAACAAATCCATTTTACTCTAATTTACAATGCTCAGGCTTATATTCTCCACAATATGTTGGAGGATATACATTTAATCCCCCAACCATTCCTCCATATGTTGCTGCATATCATCCTCATGCTGCTGTACCAGTTATTGATGGAGCTGCTGGGTCTAGTTTTACTGGACAAACACCAGGAGTTTCTGCTGCTTCACATGGAACTAATATGGTGCATGCAAACAAATTACTTGGACAATTTGGATTTCCATTGCAGCCTTCTTTTACTGATCCTATTTACATGCAATATCATCAACAACCTTTTGGGGAAGGATATTGTTTTTCTGGTCATCTTGATCCCTTGACATCTAGAGCAAGTGCAGGTAGCCAAATTGGTCATTTTGAACCACAGAAAAGGTCCAATAATTTGGATGATCAGAAATTCCAACATCAGAGGAGTGAAGGCCATGCTAATATGAACTCAAGAAGAGGTGGGCTAATGGTTCCTAGTTACTTTGGACACTCACCAAACATGGGTTTTGTAATGCAGTATCCAACTTCTCCACTTCCTAGTCCACCTCTGCCAGGCTATCCAGAAGGTGGGACTGGCCTTGTAGTTGGGAGAAATGAAATGAAGTTTTCCCCAGCTTCTGGTAGAACTGCAGGTCTATTATCTGGATGGCAAGGTCAACGAGTCTTTGATAGTGCTCATGATCCCAAAATAGTGAATTTTCTTGAAGAGTTAAAATCTGGCAAAGGTCGCAGGTTTGAGCTATCTGATATTATTGGACACATTGTTGAATTTAGTGCTGATCAACATGGGAGTCGGTTTATCCAGCAAAAGCTGGAAAATTGTGGTGTTGAAGAAAAGGCACTTGTGTTCAAAGAGGTTCTTCCACATGCCTCCAAATTAATGACTGATGTATTTGGTAACTATGTAATTCAAAAGTTTTTTGAGTATGGAAGTTCAGAGCAAAGGAAGGAACTCGCGAATCAACTGACTGGTCAGATATTACCTTTAAGTCTACAGATGTATGGCTGTCGTGTAATCCAGAAGGCACTTGAGGTTATTGAGCTCGAACAGAAAGCTCAACTTGTTCATGAGCTGGATGGTCATGTTATGAGATGCATTCGTGATCAAAATGGGAATCACGTTATACAGAAGTGTATTGAATGTATTCCAACCAAGAAAATTGGGTTTATTAGATCTGCTTTTCGTGGTCAAGTTGCAACATTATCTATGCATCCTTATGGTTGCCGTGTTGTACAGAGAGTTCTAGAGCATTGCACGGATGAGGTTCAATGTCAGTTTATTGTGGATGAAATCTTGGAGTCTGTCTGTACTCTTGCACAGGACCAGTATGGTAATTATGTTACCCAGCATGTCTTGGAGAGAGGAAAACCTCATGAAAGAAGTCAAATCATTAACAAGTTATCAGGACACATTGTGCAATTGAGCCAACATAAGTTTGCATCAAATGTTGTCGAGAAATGTTTGGAGCATGGTGATGGTACTGAACGTGAGTTGTTAATTGCAGAAATTGTCGGGCATGATGAAGAAAACGATAATTTGTTGATTATGATGAAAGACCAATTTGCCAATTATGTGGTCCAGAAGGTTCTTGAGATCTGTTCTGAACATCAACGAGCAGTATTACTTTCTCGCATAAGAGCTCATGCTCATGCTTTGAAGAAATACACTTACGGGAAACACATTGTGGCTCGTTTAGAACAGCTGTTTGGAGAAGAGAATCAAACACCTGGATCATGATGTCATTGCATGGGGAACCCGAGTCTCCTGCAGTGCTGCAGTGGTATGCAAACAACCAACTAACAGATGTTCTGCTGATCATAGGAAGATAGATCAGATGGTGATTTACGTGGCCCGCTGTTGAATACCATTGCTAATACTCGTGGGTTCAATATGTTCACCTTGGTAGTTTCTGCCTTTGATTGCCTTGACCATTTATCAAATGGATGATGGATTCAGAGAGTTACGTTAATATACAGATATATTGTGAAACATTATGCAATTATGGACCATTCCAGTAATTTTTTTTTACCATATTATTGTTAAGTACAATTATTTGGAAGGAAATCCTTCCTGATGTAAATTTGGTGGATATGCTCTATTAGGCGTGTTTCATGGAGATACAG 3353 0.4089 MGKTKPENKKAWERPSESSSSDIFLSLKSFCLSKNLGFWNSESFVSADGKVQLTLSKTRGKSILTDMATESPIRISEAGGKWSSLKEAASYGSPSRNMAAEDLGMRLKGHRFHVNGKDVVPNRSGSAPPSMEGSFHAIENLLSRQNTVQNTSLENLNRSMKKYDCNKGSLQLPQGTLSTHKEEPGDDQSPLQPELDKTNGIWHRQDIDSLASQYKNVVDLIQQDFPRTPSPVYSKSITQSHGMPEEAVDLDDSSSHDPPVTTLDAAKSTNTAEDTRVSSTAGTPAPLASSSSLGSTSSMGLKGLDVTMVESQLMAVNISNVPRSESQKYEEKWKHNSQNNLMMHQIHQQQINPNEAPSTDSQGVKCAYVSMDQFPHKPSKFSDVQPLLQSSGLTPPLYATAAAYMTSTNPFYSNLQCSGLYSPQYVGGYTFNPPTIPPYVAAYHPHAAVPVIDGAAGSSFTGQTPGVSAASHGTNMVHANKLLGQFGFPLQPSFTDPIYMQYHQQPFGEGYCFSGHLDPLTSRASAGSQIGHFEPQKRSNNLDDQKFQHQRSEGHANMNSRRGGLMVPSYFGHSPNMGFVMQYPTSPLPSPPLPGYPEGGTGLVVGRNEMKFSPASGRTAGLLSGWQGQRVFDSAHDPKIVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLENCGVEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSSEQRKELANQLTGQILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGHVMRCIRDQNGNHVIQKCIECIPTKKIGFIRSAFRGQVATLSMHPYGCRVVQRVLEHCTDEVQCQFIVDEILESVCTLAQDQYGNYVTQHVLERGKPHERSQIINKLSGHIVQLSQHKFASNVVEKCLEHGDGTERELLIAEIVGHDEENDNLLIMMKDQFANYVVQKVLEICSEHQRAVLLSRIRAHAHALKKYTYGKHIVARLEQLFGEENQTPGS 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00819 988 MobiDBLite consensus disorder prediction 1 20 - -
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 880 913 IPR001313 GO:0003723
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 845 877 IPR001313 GO:0003723
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 735 768 IPR001313 GO:0003723
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 777 792 IPR001313 GO:0003723
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 924 955 IPR001313 GO:0003723
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 700 732 IPR001313 GO:0003723
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 807 842 IPR001313 GO:0003723
Bach5g00819 988 Pfam Pumilio-family RNA binding repeat 663 697 IPR001313 GO:0003723
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 659 694 IPR001313 GO:0003723
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 803 839 IPR001313 GO:0003723
Bach5g00819 988 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 639 979 IPR033133 GO:0003723
Bach5g00819 988 SUPERFAMILY ARM repeat 644 976 IPR016024 -
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 840 875 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 767 801 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 803 839 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 659 694 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 840 875 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 731 766 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 695 730 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 876 911 IPR001313 GO:0003723
Bach5g00819 988 SMART pum_5 918 953 IPR001313 GO:0003723
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 912 953 IPR001313 GO:0003723
Bach5g00819 988 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 259 977 - -
Bach5g00819 988 FunFam Pumilio homolog 1 isoform 2 638 985 - -
Bach5g00819 988 Gene3D - 641 985 IPR011989 -
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 767 802 IPR001313 GO:0003723
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 876 911 IPR001313 GO:0003723
Bach5g00819 988 MobiDBLite consensus disorder prediction 166 196 - -
Bach5g00819 988 MobiDBLite consensus disorder prediction 255 298 - -
Bach5g00819 988 MobiDBLite consensus disorder prediction 1 16 - -
Bach5g00819 988 MobiDBLite consensus disorder prediction 232 298 - -
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 731 766 IPR001313 GO:0003723
Bach5g00819 988 ProSiteProfiles Pumilio RNA-binding repeat profile. 695 730 IPR001313 GO:0003723
Bach5g00819 988 CDD Pumilio 654 975 IPR033712 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00819 Bach-Chr5 5639943 5648422 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00819 K17943 - gmx:100780168 1267.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00819 5 5639943 5648422 Bach2g01560 2 24478372 24484413 BWGD