Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g01560 ATGGCAACTGAGAGTCCAATTAGAATCTCAGAAGCTGGTGGAAAGTGGCCGCCCCTGAAAGAAGCTGCAAGTTATGGTTCACCATCACAAAACATGGCTGCAGAGGATTTGGGCATGCTTTTGAAGGGTCATAGATTCCATGGTGGGGGAAAGGACGTGGTTCCCAATCGAAGTGGCAGTGCACCCCCAAGCATGGAAGGTTCATTTCATGCCATAGAAAACCTATTATCCCGACAAAACACCATCAAGAATGCAAGTTTGGCTGATCTGAACTGGGCTATGCAAAAATATGATAGCAGTAAAGGTTCTCCACAATTGCTACGAGGGACTCTTTCAACACACAAGGAGGAGTCTGAGGATGATCAATCACCCCTGCAACCATATGATGGGGAGTTAGATAAGACAAGTGGAATTTGGCATAGACAGGATGCAGATTCACTGGCATCCCAGTACAAAAATGTGGTTGATTTAATACAGCAAGATTTTCCGCGTACTCCATCACCTGTATATAGTAAGTCTATCACCTTAAGTCATAGAATGACAGAGGAAGTAGTTGACTTAGATGCTGGTTACAGTTCTTCTCATGATCCCCCAACATTAGATGCTGCTAAATCTACTATAACTGCTGAAGATTCAAGGTTGTCACCAACTGCTGATACTCCAGCCCCTGTTGCAAGCTCTTCATCTCTTGGATCCACAAGTAGCATTGGTTTGAATGATTTAGATGTAACAATGGTTGAATCTCAATTGAGGGCTGTTAATATATCTAATGTACCTAGATCAGAAAGCCAGAAATATGAAGAAAAATGGAAGCACAACTCTCAGAGTAATTTGATGATGCACCAGATTCACCAGCAGCAAAACAATCCATGTGAAGCTCATAATGCCAATTCTCAAGGTGTAAATTGTGCATATGTTTCTATGGATCAATTTCCTCATAATCCCAATAAGTTCTCTGATGTTCAGCCACTATTACAGTCATCTGGTTTTACACCTCCATTATATGCCACTGCAGCAGCTTATATGACCTCAACAAATTACACTAATTTGCAAGGCTCGGGCTTATACTCTCCACAGTATGTAGGAGGATATGCATTTAATCCCACAACTATTCCTCCATATGTTGCTGCATTTCCTCCTCATGCTGCTGTACCAGTTGTTGTTGATGGAGCTGCTGGGTCTAGTTTTACTTCACAAACACCAGGAGTTTCAACTGCTTCACATGGAACTGATATTGCTCATGCAAACAAATTGGTTGGACAATTTGGATTTCCAATGCAGCCTTCTTTTGCTGATCCTATTTACATGCAATATCATCAACCAGCTTTTGGCGAAGGATATGGTTTTTCTGGTCATTTTGATCCATTGGCATCTAGAGCAAGTGCAGGTAGCCAAATTGGTCATTTTGAACCCCCACATAAAAGGTCCAATAATGGTGGTTATTTGGATGATCAGAAATTTCAACATCAGAGGAGTGAAGGCCATGCTAATATGAGCTTAAGAAGAGGTGGGCTAATGGTTCCTACTTACTTTGGACACTCACCAAGCATGGGTTTTGTAATGCAGTATCCAACTTCCCCACTTCCTAATCCAGTTTTGCCAGGATACCCAGAAGGTGGGAATGGCCTTGCAGGAGGGAGAAATGCAATGAAGTTGTCCCCAGCTTCTGGTAGAAATGCAGGTGTATTATCTGGATGGCAAGGTCAACGAGCCTTTGATGGTACTCATGATCCCAAAATGGTTAATTTTCTTGAAGAGTTAAAATCTGGCAAAGGTCGTCGGTTTGAGCTATCCGATATTATTGGACATATTGTTGAATTTAGCGCTGATCAACATGGGAGTAGGTTTATCCAGCAAAAGTTGGAAAATTGTGGGGTTGAAGAGAAGGCACTTGTGTTCAAAGAGGTTCTTCCACATGCTTCCAAATTAATGACTGATGTCTTTGGTAACTATGTAATTCAAAAGTTTTTTGAGTACGGAAGCCTGGAGCAAAGCAAGGAACTTGCAAATCGACTGACTGGTCAGATATTGCCTTTAAGTCTACAGATGTATGGCTGTCGTGTTATCCAAAAGGCACTGGACGTAATTGATCTTGAACAGAAAGCTCAACTGGTTCATGAGCTAGATGGTCATGTTATGAGATGCATTCGTGATCAAAACGGGAATCATGTCATACAGAAGTGTATAGAATGTATTCCAACCAAGAAAATTGAGTTTATAATATCTGCTTTTCGCAGTCAAGTTGCAACGTTATCTACGCATCCTTATGGTTGCCGTGTTGTTCAGAGAGTTCTAGAGCATTGTACGGATGAGGTTCAATGTCAGTTTATTGTGGATGAAATCTTGGAGTCTGTCTGTACTCTTGCTCAGGACCAGTATGGTAATTATGTTACCCAGCATGTATTGGAGAGAGGAAAGCCTCATGAAAGGAGTCAAATCATTAACAAGTTATCAGGACATATTGTGCAATTGAGCCAGCATAAGTTTGCATCAAATGTTGTTGAGAAATGCTTGGAGCATGGTGATGATACTGAAAGGGAGTTATTGATTGCAGAAATTGTTGGGCATGATGAAGAAAATGATAATTTATTGATAATGATGAAAGACCAATTTGCCAATTATGTGGTCCAGAAGGTTCTTGAGATCTGTTCCAAACATCAACGAGCAGTATTACTTTCTCGCATAAGGGCTCATGCTCATGCTTTGAAGAAATACACTTATGGGAAGCACATTGTGGCTCGTTTAGAACAGCTGTTTGGAGAAGAGAATCAATCACCTGGATCATGATGGTATTACATGGTAAACCAGAGTCTCCTGCAATGTTGCAGTGGCATGCAAACAAACCAACCAACCAATTTTCTGCTGATCACAGGAGATGAGATGGTTTTTCTCGGGCACCGCTATGATTATCTTTGCTAATACTCGTGGGTTCATATGTGCACCTTGGTAGTTTCTGCCTTTGAATGCCTTGACCATTTATCAAATGGATAATGGTTTTAGATTTACAATAACATATATATATATATATATATATATTATGAAACATTGCGTAATTATATACCATTCCAGTATTGTTTCATATTGTCAAGTACAATTATTTGGAAGGAAACCCTCCCTGATGTACAATTTGC 3131 0.4056 MATESPIRISEAGGKWPPLKEAASYGSPSQNMAAEDLGMLLKGHRFHGGGKDVVPNRSGSAPPSMEGSFHAIENLLSRQNTIKNASLADLNWAMQKYDSSKGSPQLLRGTLSTHKEESEDDQSPLQPYDGELDKTSGIWHRQDADSLASQYKNVVDLIQQDFPRTPSPVYSKSITLSHRMTEEVVDLDAGYSSSHDPPTLDAAKSTITAEDSRLSPTADTPAPVASSSSLGSTSSIGLNDLDVTMVESQLRAVNISNVPRSESQKYEEKWKHNSQSNLMMHQIHQQQNNPCEAHNANSQGVNCAYVSMDQFPHNPNKFSDVQPLLQSSGFTPPLYATAAAYMTSTNYTNLQGSGLYSPQYVGGYAFNPTTIPPYVAAFPPHAAVPVVVDGAAGSSFTSQTPGVSTASHGTDIAHANKLVGQFGFPMQPSFADPIYMQYHQPAFGEGYGFSGHFDPLASRASAGSQIGHFEPPHKRSNNGGYLDDQKFQHQRSEGHANMSLRRGGLMVPTYFGHSPSMGFVMQYPTSPLPNPVLPGYPEGGNGLAGGRNAMKLSPASGRNAGVLSGWQGQRAFDGTHDPKMVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLENCGVEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGSLEQSKELANRLTGQILPLSLQMYGCRVIQKALDVIDLEQKAQLVHELDGHVMRCIRDQNGNHVIQKCIECIPTKKIEFIISAFRSQVATLSTHPYGCRVVQRVLEHCTDEVQCQFIVDEILESVCTLAQDQYGNYVTQHVLERGKPHERSQIINKLSGHIVQLSQHKFASNVVEKCLEHGDDTERELLIAEIVGHDEENDNLLIMMKDQFANYVVQKVLEICSKHQRAVLLSRIRAHAHALKKYTYGKHIVARLEQLFGEENQSPGS 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g01560 928 SUPERFAMILY ARM repeat 584 916 IPR016024 -
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 780 815 IPR001313 GO:0003723
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 599 634 IPR001313 GO:0003723
Bach2g01560 928 MobiDBLite consensus disorder prediction 468 494 - -
Bach2g01560 928 Gene3D - 579 925 IPR011989 -
Bach2g01560 928 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 579 919 IPR033133 GO:0003723
Bach2g01560 928 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 218 917 - -
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 640 670 IPR001313 GO:0003723
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 717 742 IPR001313 GO:0003723
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 675 708 IPR001313 GO:0003723
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 747 782 IPR001313 GO:0003723
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 864 895 IPR001313 GO:0003723
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 785 817 IPR001313 GO:0003723
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 820 853 IPR001313 GO:0003723
Bach2g01560 928 Pfam Pumilio-family RNA binding repeat 603 637 IPR001313 GO:0003723
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 816 851 IPR001313 GO:0003723
Bach2g01560 928 MobiDBLite consensus disorder prediction 198 232 - -
Bach2g01560 928 MobiDBLite consensus disorder prediction 99 130 - -
Bach2g01560 928 FunFam Pumilio homolog 1 isoform 2 578 925 - -
Bach2g01560 928 MobiDBLite consensus disorder prediction 190 232 - -
Bach2g01560 928 CDD Pumilio 594 915 IPR033712 GO:0003723
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 635 670 IPR001313 GO:0003723
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 707 742 IPR001313 GO:0003723
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 671 706 IPR001313 GO:0003723
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 743 779 IPR001313 GO:0003723
Bach2g01560 928 MobiDBLite consensus disorder prediction 1 30 - -
Bach2g01560 928 Pfam Nucleic acid binding protein NABP 254 598 IPR012940 -
Bach2g01560 928 ProSiteProfiles Pumilio RNA-binding repeat profile. 852 893 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 707 742 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 671 706 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 635 670 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 816 851 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 858 893 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 780 815 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 599 634 IPR001313 GO:0003723
Bach2g01560 928 SMART pum_5 743 779 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g01560 Bach-Chr2 24478372 24484413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g01560 K17943 - gmx:100780168 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00819 5 5639943 5648422 Bach2g01560 2 24478372 24484413 BWGD