Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g01247 GACTGACCAGACCTTCCTATTTCCTATATAAAAATACCGAGGAGAATCTCTCTTGCTGATCAGCCGGTCGCCATGGAAACTCTTCTCATATAACACAGATTCTCTCTCCATCTCTCTCTTCAATCATATTCTTCTTCTGTTTGGCTCTCGAGAAAGTTTTGGAAGCTTCTTCCTTGTTCCTTCTCTCGTCTTTCCTCCTTCACTCGCAGGTGGTCAAGATGTCGACTCCTTCTAGGAAGAGATTGATGAGGGATTTTAAGAGATTGCAACAAGATCCTCCTGCCGGCATCAGTGGTGCGCCCCAAGACAATAATATTATGCATTGGAATGCTGTTATATTTGGGCCTGATGACACCCCATGGGATGGAGGTACGTTTAAGTTGACACTTCAGTTCACAGAGGATTATCCTAATAAACCCCCAACAGTGCGCTTTGTATCTCGAATGTTCCATCCAAACATTTATGCGGATGGAAGCATATGCTTGGACATTCTACAAAATCAGTGGAGCCCCATTTATGATGTAGCTGCAATACTTACCTCAATCCAGTCCTTGCTGTGTGATCCAAACCCGAACTCGCCAGCAAATTCCGAAGCTGCTCGGATGTTTAGCGAAAACAAGCGTGAATACAACAGAAGAGTACGCGAGATCGTTGAGCAGAGTTGGACTGCTGATTAGATTTATTCTGGGGCTGCTATGTAAGTTGAAAGGTTGTCAAAGGATCTCAAGGATCTGATTGAATAACCGTCAAACTTAAAAAAAAAAAAAAAAAAGAACTATTATGTTGTCGTAGTCTAGACTTCTGATCATCCAGTATGTTTGCTCGGACTTGTATGAACTAATATATGAAACCTCATCATCT 861 0.4228 MSTPSRKRLMRDFKRLQQDPPAGISGAPQDNNIMHWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g01247 152 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 149 - -
Bach4g01247 152 SUPERFAMILY UBC-like 1 150 IPR016135 -
Bach4g01247 152 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 77 92 IPR023313 -
Bach4g01247 152 CDD UBCc 7 145 IPR000608 -
Bach4g01247 152 Pfam Ubiquitin-conjugating enzyme 8 144 IPR000608 -
Bach4g01247 152 Gene3D Ubiquitin Conjugating Enzyme 2 149 IPR016135 -
Bach4g01247 152 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 4 150 IPR000608 -
Bach4g01247 152 FunFam Ubiquitin-conjugating enzyme E2 2 1 148 - -
Bach4g01247 152 SMART ubc_7 7 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g01247 Bach-Chr4 8679029 8683501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g01247 7 120 Miscellaneous Gene Families AT1G17280 31.092 2.20e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g01247 K10573 - jre:108989809 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01247 4 8679029 8683501 Bach10g01021 10 7363704 7373313 BWGD
Bach4g01247 4 8679029 8683501 Bach4g01247 4 8679029 8683501 ECH