Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01021 ATGGCGCAAGAACAGGAGGTCAGGCCAAGCAACAAATTCTCAAGCTGTGATACCTACTTTGAGACCATCCAGTCCAGAAAGAAACTACCAAAGGAATTGCAAGAGTCATTAACAGATGCCTTTGCTAAGATTCCTGTATCTTCTTTTCCAGGAGTTCCAGGAGGACAAGTTGTTGAAATCCAAGCAGACGCATCTGTTGGTGAAGCAGTTAGGATTCTATCTGAATGCAACATATTAGCTGCCCCTGTAAGAGACCCAGATGCAGGAACTTGTTCAAATTGGAGAGAGAGGTACCTTGGCATCATAGATTATTCATCCATTGTTCTCTGGGTGCTGGAAAGTGCAGAACTTGCTGCGGTTGCCATATCAGCAAGCACAGCAACAGCTGCTGGAATTGGTGCAGGAACAGCTGGTGCTCTGGGAGCGCTGGCAGTGGGAGTGACAGGTCCTGTGGCGGTTGCTGGTCTAACGGCTGCTGCAGTTGGTGCTGCAGTGGCAGGCAGGGTTGCTGCAGATAAGGGGATGGGTAAGGATGCTCCTGCAGCTGCTGACGAACTGGGTAACGACTTCTACAAGATTTTACTGCAAGAAGAACCCTTCAAATCAACAACGGTTCGATCAATAATTAAATCATACCGGTGGGCTCCTTTCATTCCAGTTGCAACAGATAGTGCTATGTTGACAGTCTTGCTGCTTCTCTCAAAATATAGGTTGAGGAATGTTCCCATCATTGAACCAGGGAAGCCTGACATTAAGAACTTCATTACTCAGTCTGCAGTAATTCAAGGTCTTGAGGGATGCAAAGGAAGAGATTGGTTTGATCTAATAGCTGCAAGTCCTATATCAGACCTGGGACTGCCTTTCATGATTCCTGATGAGATTGTGAGCATCCAGAAGAATGAATTTATTCTTGAAGCTTTCAAGCGAATGAAAGATAATCATATCGGTGGTCTTCCTGTAGTAGAAGGGCCAGAGAAGAGAATTGTTGGGAACTTAAGCATAAGAGATATTAGATATTTGCTGCTAAGGCCTGAACTTTTCTCCAATTTCAGGAAGCTCACTGTGATGGATTTCATGAATACAATTGTGAAAGCAACCAGAGAAACTGGGAAAATTACTCATCCCATAACATGCAAGCCTGACTCGACTCTGGGAGATGTGATCCACACTCTTGCTTCTCACCCTGTTCACAGGATTTATGCAGTTAATGAAAATGATGAAGCAGTTGGTGTCATTACACTGAGAGATGTCATCACTTGTTTCATCACTGAACCTTCTTACCACTTCGACGATTACTTTGGCTTTGCTGTGAAAGAGATGTTGGTCCTTCCATCATATTCCTCTTCTGTTTGGTTCTCGAGCAAGTGTTGGAAGTTTCTTCCTAGTTTCTTCTCTCGTTTTTCCTCGTTCCTAAACCAGCTTTTCTCGGACTGCAGCTTCAGCTCGCAAGTGGTCAAGATGTCGACTCCTGCAAGGAAGAGATTGATGAGGGATTTCAAGAGATTGCAACAAGATCCTCCTGCCGGTATCAGTGGTGCGCCCCAAGACAATAATATTATGCTTTGGAATGCTGTTATCTTTGGGCCTGATGACACCCCATGGGATGGAGGCACGTTTAAGTTGACACTTCAGTTCACAGAGGATTATCCCAATAAGCCACCTACTGTGCGCTTTGTATCTCGAATGTTCCATCCAAACATTTATGCGGATGGAAGCATATGCCTGGACATTCTACAAAATCAATGGAGCCCTATTTATGATGTAGCTGCAATACTTACCTCAATCCAGTCGTTGCTGTGTGATCCAAACCCAAACTCTCCGGCAAATTCCGAAGCTGCTCGGATGTTCAGCGAAAACAAGCGTGAATACAACAGAAGAGTACGCGAGATCGTTGAGCAGAGTTGGACTGCTGATTAGATTACTCTGGGGCCGTTACGTAAGTTAAGGTTGTCAAAGGATCTCAATGATCTGATTGAATAACCATTAAACTCAAAAAAAGAACTATTGTGTTGTAGTCCTTGACTTCCATCCAATATGTTTGCTGAGACTTGTATGAATTAATATAAAACCTTCTTTATGTTAATAGAACCTGCTGATTTGT 2101 0.4388 MAQEQEVRPSNKFSSCDTYFETIQSRKKLPKELQESLTDAFAKIPVSSFPGVPGGQVVEIQADASVGEAVRILSECNILAAPVRDPDAGTCSNWRERYLGIIDYSSIVLWVLESAELAAVAISASTATAAGIGAGTAGALGALAVGVTGPVAVAGLTAAAVGAAVAGRVAADKGMGKDAPAAADELGNDFYKILLQEEPFKSTTVRSIIKSYRWAPFIPVATDSAMLTVLLLLSKYRLRNVPIIEPGKPDIKNFITQSAVIQGLEGCKGRDWFDLIAASPISDLGLPFMIPDEIVSIQKNEFILEAFKRMKDNHIGGLPVVEGPEKRIVGNLSIRDIRYLLLRPELFSNFRKLTVMDFMNTIVKATRETGKITHPITCKPDSTLGDVIHTLASHPVHRIYAVNENDEAVGVITLRDVITCFITEPSYHFDDYFGFAVKEMLVLPSYSSSVWFSSKCWKFLPSFFSRFSSFLNQLFSDCSFSSQVVKMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01021 638 ProSiteProfiles CBS domain profile. 289 348 IPR000644 -
Bach10g01021 638 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 563 578 IPR023313 -
Bach10g01021 638 SUPERFAMILY CBS-domain pair 279 430 IPR046342 -
Bach10g01021 638 CDD UBCc 493 631 IPR000608 -
Bach10g01021 638 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 490 636 IPR000608 -
Bach10g01021 638 Pfam CBS domain 293 341 IPR000644 -
Bach10g01021 638 Pfam CBS domain 373 418 IPR000644 -
Bach10g01021 638 Gene3D - 52 267 IPR046342 -
Bach10g01021 638 SMART cbs_1 56 112 IPR000644 -
Bach10g01021 638 SMART cbs_1 374 422 IPR000644 -
Bach10g01021 638 SMART cbs_1 216 265 IPR000644 -
Bach10g01021 638 SMART cbs_1 293 342 IPR000644 -
Bach10g01021 638 Gene3D Ubiquitin Conjugating Enzyme 485 634 IPR016135 -
Bach10g01021 638 SUPERFAMILY CBS-domain pair 36 262 IPR046342 -
Bach10g01021 638 CDD CBS_pair_SF 292 418 - -
Bach10g01021 638 SUPERFAMILY UBC-like 480 636 IPR016135 -
Bach10g01021 638 Pfam Ubiquitin-conjugating enzyme 494 630 IPR000608 -
Bach10g01021 638 FunFam Ubiquitin-conjugating enzyme E2 2 487 634 - -
Bach10g01021 638 Gene3D - 275 424 IPR046342 -
Bach10g01021 638 ProSiteProfiles CBS domain profile. 51 117 IPR000644 -
Bach10g01021 638 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 489 635 - -
Bach10g01021 638 SMART ubc_7 493 636 - -
Bach10g01021 638 ProSiteProfiles CBS domain profile. 371 431 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01021 Bach-Chr10 7363704 7373313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01021 493 606 Miscellaneous Gene Families AT1G17280 31.092 2.84e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01021 - - gmx:100800376 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g01247 4 8679029 8683501 Bach10g01021 10 7363704 7373313 BWGD
Bach10g01021 10 7363704 7373313 Bach10g01021 10 7363704 7373313 ECH