Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00631 ATAGAACTAAGCAAGCTCAGGGGCAGAGCAGAAAGTTTGCCGTGGAAATGTGGCGGTGCGTCGCTCGTGGACTTCGACTACCAGCTTCCAAAAGATCCACTCCAAATGACCCACTTAGATCTCACATTTCGAGATTTTTCTCTACTGGGGAAAGCTCGGTGGCTGGGGGTAAATATACTGTGGTGGATCATACTTATGATGCAGTTGTTGTAGGTGCTGGTGGGGCAGGGTTGAGAGCCGCTATTGGACTTTCGGAACATGGATTTAATACTGCTTGCATTACCAAACTTTTCCCAACTCGTTCGCACACTGTTGCAGCTCAGGGTGGTATAAATGCTGCATTGGGAAATATGACTGAAGATGACTGGAGGTGGCACATGTATGACACAGTCAAGGGAAGTGATTGGTTAGGAGATCAGGATGCAATCCAATATATGTGTAGGGAGGCACCAAAAGCAGTCATTGAACTTGAGAATTATGGGTTGCCATTTTCCCGAACTGAGGAAGGAAAAATATACCAGCGTGCTTTTGGTGGTCAAAGCCTGAATTTTGGAAAAGGTGGTCAGGCATATCGATGTGCTTGTGCTGCTGATCGAACTGGACACGCTTTATTGCATACTCTCTATGGCCAGGCTATGAGACACAATACACAATTTTTTGTAGAATATTTTGCTCTGGATCTATTGATGAATAGTGATGGTAGTTGCCAAGGAGTGATTGCATTGAATATGGAGGATGGAACATTGCATCGGTTCCAAGCTGCTTCTACAATTTTGGCCACTGGGGGTTATGGTAGGACATATTTTTCTGCAACCTCAGCGCATACATGCACTGGAGATGGCAATGCTATGGTTGCACGTGCTGGACTCCCACTTCAGGATTTGGAGTTTGTGCAATTTCACCCAACAGGTATATATGGAGCTGGTTGCCTTATTACAGAAGGTTCTCGTGGAGAAGGTGGAATTCTCAGGAACAGTGAGGGTGAGCGATTCATGGAAAGATATGCCCCTACTGCAAAGGATCTTGCATCTAGGGATGTTGTTTCAAGATCAATGACTATGGAAATTCGGGAAGGCCGTGGTGTAGGACCTCTGAAGGACCACATCTATCTCCATTTGAACCACTTACCCCCAGATGTGCTCAAGGAGAGGCTTCCTGGTATCTCAGAAACTGCTGCTATTTTTGCTGGTGTTGATGTTACAAAGGAACCAATCCCTGTTTTGCCAACAGTGCACTATAACATGGGTGGCATTCCCACAAACCATCATGGAGAGGCTGTTACAATGAAAGGTGACAATCCAGATTCAGTAATACCTGGGTTGATGGCTGCTGGGGAAGCGGCCTGTGCATCCGTCCATGGTGCCAATAGGCTTGGTGCTAATTCACTTCTGGACATCGTTGTTTTTGGTAGAGCTTGTGCAAATAGAGTTGCAGAAATCCAAAGGCCAGGTGAGAAACAAAAGCCCTTGGAGAAGGATGCTGGTCAGAGAACAATTGCATGGCTGGACAAATTAAGAAATTCAAATGGTTCTTTACCAACTTCACAAATCCGGTTGAATATGCAACGAATAATGCAAAGCAATGCTGCGGTGTTCCGTACACAAGAAACATTAGAAGAAGGTTGTCAATTAATTGATAAAGCATGGGAGAGCTTTCATGATGTTAAGTTGAAAGACCGGAGTCTGATATGGAATAGTGACCTGATTGAGACTATAGAGTTGGAAAATCTTTTGATAAATGCCTGCATCACTATGCACTCTGCTGAAGCCAGGAAAGAGAGTAGAGGAGCTCATGCCCGCGAGGACTTCACGAAAAGAGATGATGAGAAATGGCTAAAACACACTTTGGGATACTGGAAGAATGAGAATGTCCGGCTAGATTATCGGCCGGTGCACATGAATACATTGGACGACGAGATTGAATCATTCCCCCCTAAAGCTCGTGTGTATTAATATGTTTTAGATAAAATCATTTCAGTGAGTTTGGAATGACTGGTGCAAGTAAATCGATGCAATAAAATTGTTGCGTACTCATCGCTTTAACGATGGATGCAAGCAATAAATTATTGTAAGCGCCTCGTTTTGACGATAATTGTAACATTCATGATCAATGAACTGATTTGTTGCAAGTGATCCTCAAA 2140 0.4407 MWRCVARGLRLPASKRSTPNDPLRSHISRFFSTGESSVAGGKYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLNFGKGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFQAASTILATGGYGRTYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEAVTMKGDNPDSVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGEKQKPLEKDAGQRTIAWLDKLRNSNGSLPTSQIRLNMQRIMQSNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWLKHTLGYWKNENVRLDYRPVHMNTLDDEIESFPPKARVY 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00631 634 FunFam Mitochondrial succinate dehydrogenase flavoprotein subunit 289 392 - -
Bach4g00631 634 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 279 397 IPR027477 -
Bach4g00631 634 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 586 634 - -
Bach4g00631 634 Pfam FAD binding domain 51 447 IPR003953 -
Bach4g00631 634 FunFam Succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 39 262 - -
Bach4g00631 634 Pfam Fumarate reductase flavoprotein C-term 503 634 IPR015939 GO:0016491
Bach4g00631 634 NCBIfam succinate dehydrogenase flavoprotein subunit 48 634 IPR011281 GO:0006099|GO:0016627|GO:0050660
Bach4g00631 634 Gene3D - 51 458 IPR036188 -
Bach4g00631 634 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 493 634 IPR037099 GO:0016491
Bach4g00631 634 FunFam Succinate dehydrogenase flavoprotein subunit (SdhA) 473 589 - -
Bach4g00631 634 Gene3D - 474 584 - -
Bach4g00631 634 Gene3D succinate dehydrogenase protein domain 585 634 - -
Bach4g00631 634 SUPERFAMILY FAD/NAD(P)-binding domain 43 470 IPR036188 -
Bach4g00631 634 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 39 634 IPR030664 -
Bach4g00631 634 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 393 458 - -
Bach4g00631 634 ProSitePatterns Fumarate reductase / succinate dehydrogenase FAD-binding site. 85 94 IPR003952 GO:0016491
Bach4g00631 634 NCBIfam succinate dehydrogenase or fumarate reductase, flavoprotein subunit 51 634 IPR014006 GO:0016627|GO:0022900|GO:0050660
Bach4g00631 634 PIRSF SDHA_APRA_LASPO 41 623 - -
Bach4g00631 634 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 289 392 IPR027477 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00631 Bach-Chr4 4214250 4219965 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00631 K00234 - jre:108995347 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00631 4 4214250 4219965 Bach10g00542 10 3865448 3871022 BWGD
Bach4g00631 4 4214250 4219965 Bach4g00631 4 4214250 4219965 ECH