Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach4g00197 ATGGATGATTCAACAGTTTCGTCATCGTTAACTACTCAATCAGCTATTGCAACTCCTCCTTCCCCTTCTTCTCAGCTCACTCTACCTCCCGATGTATCTAGACCCTCTCTTGACACCCTAACCCATTCTCGTCATGTCCAGCGCATGCTCAACTTCGATCACTATAAATCACCTTCCAGACCAATCTACTCCGATAGGTTCATACCTAGCAGATCTGGCTCTAATTTCGCTCTCTTCAATATACCTCCGTCAACGAATTCTCCAGCAGAGGGACGCGAGGACAGTTCCAGCACCTACACTTCCCTCTTGCGCGCTGCATTATTTGGACCTGATACCGGGGTAGTACCTCCGGTGACACCGGACAAAAGGAGCTTCTCTATGAACCCACCAAGTCGAAATATTTTCCGTTATAAAACAGAAACTCGGCAGCCCATGCACTCACTTTCGCCGTTTGTGTACGATGATGTCGTTACTGGAGCTACTCATAGCCCAGTTAAGACTCCTAGGAAGGTTCCACGGTCGCCTTATAAGGTTTTGGATGCTCCAGCATTGCAAGATGATTTTTATCTCAATCTTGTGGATTGGTCTTCGCACAATGTATTGGCCGTGGGGTTGGGTAACTGCGTCTATTTGTGGAATGCTTGTAGTAGCAAGGTAACTAAATTATGTGACTTGGGTATTGACGACAGCGTTTGCTCAGTTGGCTGGGCTCAGCGCGGTACACATCTTGCTGTTGGAACTAGCAATGGCAAAGTCCAGATCTGGGATGCATCTCGATGCAAGAAGACGAGAACTATGGAGGGTCATCGTTTACGTGTTGGGGCCTTGTCCTGGAGTTCATCTCTTCTGTCTTCTGGTGGCCGGGATAAGAATATTTATCAACGAGATATACGCGCACAGGAAGATTTTGTTAGTAAACTGTCAGGGCACAAGTCAGAGGTTTGTGGGCTGAAATGGTCTTATGATAACCGTGAATTGGCATCTGGAGGAAATGACAACAGACTGTTTGTCTGGAATCAACACTCTACCCAGCCTATCCTGAAGTACTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCTCATCTTCATGGACTTCTTGCATCTGGGGGAGGAACGGCTGACCGGTGTATCCGTTTCTGGAATACAACCACAAACTCACACTTAAGTTGTATGGACACTGGAAGTCAGGTATGCAACCTCGTCTGGTCCAAAAATGTAAATGAACTGGTAAGCACACATGGTTATTCCCAGAATCAGATCATAGTTTGGAGATACCCCAACATGTCAAAGCTGGCAACTCTTACAGGCCATACATATAGGGTCCTTTATCTTGCCATCTCTCCTGATGGACAGACAATTGTGACTGGGGCTGGAGACGAGACACTTAGGTTTTGGAATGTATTTCCTTCCCCTAAATCTCAGAATACCGACAGTGAAATTGGAGCTTCATCTCTTGGAAGAACTACAATTAGGTGA 1485 0.4633 MDDSTVSSSLTTQSAIATPPSPSSQLTLPPDVSRPSLDTLTHSRHVQRMLNFDHYKSPSRPIYSDRFIPSRSGSNFALFNIPPSTNSPAEGREDSSSTYTSLLRAALFGPDTGVVPPVTPDKRSFSMNPPSRNIFRYKTETRQPMHSLSPFVYDDVVTGATHSPVKTPRKVPRSPYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAQRGTHLAVGTSNGKVQIWDASRCKKTRTMEGHRLRVGALSWSSSLLSSGGRDKNIYQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPILKYCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPNMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTTIR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach4g00197 494 ProSiteProfiles Trp-Asp (WD) repeats profile. 437 470 IPR001680 GO:0005515
Bach4g00197 494 ProSiteProfiles Trp-Asp (WD) repeats profile. 224 265 IPR001680 GO:0005515
Bach4g00197 494 Pfam WD domain, G-beta repeat 433 469 IPR001680 GO:0005515
Bach4g00197 494 Pfam WD domain, G-beta repeat 344 384 IPR001680 GO:0005515
Bach4g00197 494 Pfam WD domain, G-beta repeat 304 339 IPR001680 GO:0005515
Bach4g00197 494 ProSiteProfiles Trp-Asp (WD) repeats profile. 307 348 IPR001680 GO:0005515
Bach4g00197 494 FunFam FIZZY-related 2 isoform 1 172 472 - -
Bach4g00197 494 MobiDBLite consensus disorder prediction 475 494 - -
Bach4g00197 494 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 307 339 - -
Bach4g00197 494 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 437 470 - -
Bach4g00197 494 SMART WD40_4 216 256 IPR001680 GO:0005515
Bach4g00197 494 SMART WD40_4 430 469 IPR001680 GO:0005515
Bach4g00197 494 SMART WD40_4 342 384 IPR001680 GO:0005515
Bach4g00197 494 SMART WD40_4 300 339 IPR001680 GO:0005515
Bach4g00197 494 SMART WD40_4 172 213 IPR001680 GO:0005515
Bach4g00197 494 SMART WD40_4 259 296 IPR001680 GO:0005515
Bach4g00197 494 MobiDBLite consensus disorder prediction 1 38 - -
Bach4g00197 494 Gene3D - 165 474 IPR015943 GO:0005515
Bach4g00197 494 ProSitePatterns Trp-Asp (WD) repeats signature. 456 470 IPR019775 -
Bach4g00197 494 SUPERFAMILY WD40 repeat-like 176 476 IPR036322 GO:0005515
Bach4g00197 494 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 43 491 IPR033010 GO:0010997|GO:0097027|GO:1904668
Bach4g00197 494 Pfam Anaphase-promoting complex subunit 4 WD40 domain 226 280 IPR024977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach4g00197 Bach-Chr4 1310141 1315810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach4g00197 294 470 Miscellaneous Gene Families AT5G08390 24.157 1.08e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach4g00197 K03364 - qsa:O6P43_024251 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00180 10 1263495 1267558 Bach4g00197 4 1310141 1315810 BWGD
Bach4g00197 4 1310141 1315810 Bach4g00197 4 1310141 1315810 ECH