Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00180 ATGAATGATTCAACAGTTTCCTCATCGTTAACTCCCCAATCAACTCTCGCAACTCCTCCTTCCTCTTCTTCTCAGCTCACTCTACCTCCCGACATATCTCGACCCTCTCTCTCCCTTGACAACGTAACCCATTCTCGTCATGTCGACCGTATGATAAACTCCAATCACTATAAATCACCTTCCAAACCAATCTACTCTGATAGGTTCATACCCAGCAGATCTGGCTCCAATTTCGCTCTCTTCAATATGCCGCCACCAACGAATTCTCCCGTAGAGGGACGCGAGGACAGTTCTAGCACCTACACCACCCTCTTGCGCGCTGCATTATTTGGACCTGATACCGGAGTCGCACCTCCGTTTACACCGGAAAAAAGGAGCTTCTCTATGAACCCACCAAGTCGAAATATTTTCCGTTATAAAACAGAAACTCGGCAGCCCATGCACTCACTTTCGCCGTTTGTATATGATGATGTCGTTACCGGGGCTACTCATAGCCCCGTTAAGACTCCTAGGAAGGTCCCACGGTCGCCTTATAAGGTTTTGGATGCTCCTGCATTGCAAGATGATTTTTATCTCAATCTTGTGGATTGGTCTTCGCATAATGTATTGGCAGTTGGGTTGGGTAACTGCGTATATTTGTGGAATGCTTGTAGTAGCAAGGTAACTAAATTATGTGACTTGGGGATTGACGACAGCGTTTGTTCAGTTGGCTGGGCTCAGCGCGGTACACATCTTGCTGTTGGAACCAGTAATGGCAAAGTCCAGATTTGGGATGCATCTCGATGCAAAAAGATGAGAACTATGGAAGGTCATCGTTTACGTGTTGGGGCCTTGGCCTGGAGTTCTTCTCTTCTGTCTTCTGGTGGCCGGGATAAGAATATTTATCAACGAGATATACGTGCACAGGAAGATTTTGTTAGTAAACTTTCTGGGCACAAGTCAGAGGTTTGCGGGCTGAAGTGGTCTTATGATAACCGTGAATTGGCATCCGGAGGAAATGATAACAGACTGTTTGTCTGGAATCAACACTCTACTCAGCCTATCCTGAAGTTCTGTGAGCATACAGCAGCTGTTAAAGCTATTGCATGGTCTCCCCATCTTCACGGACTTCTTGCATCTGGGGGAGGAACTGCTGACCGGTGTATTCGTTTCTGGAACACAACCACAAACTCACACTTGAGCTGTATGGACACTGGAAGTCAGGTGTGCAATCTTGTCTGGTCTAAAAATGTAAATGAACTGGTAAGCACGCATGGTTATTCCCAGAACCAGATAATAGTTTGGAGATACCCCAACATGTCAAAGCTGGCAACTCTTACAGGTCATACGTATAGGGTCCTTTATCTTGCCATCTCTCCTGATGGACAGACAATTGTCACCGGAGCTGGAGATGAGACGCTTAGGTTTTGGAATGTATTTCCTTCCCCTAAATCTCAGAATACCGATAGTGAAATTGGAGCATCATCTCTTGGAAGAACTACTATTAGGTGACTGTGATTCTCTAGTGTTTCGAACTTCCCGTTTCTATCCAGAGGGAAATTTCATAAAAAAAAATTTCATGTGCGAGACACTATCGAAA 1579 0.4541 MNDSTVSSSLTPQSTLATPPSSSSQLTLPPDISRPSLSLDNVTHSRHVDRMINSNHYKSPSKPIYSDRFIPSRSGSNFALFNMPPPTNSPVEGREDSSSTYTTLLRAALFGPDTGVAPPFTPEKRSFSMNPPSRNIFRYKTETRQPMHSLSPFVYDDVVTGATHSPVKTPRKVPRSPYKVLDAPALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAQRGTHLAVGTSNGKVQIWDASRCKKMRTMEGHRLRVGALAWSSSLLSSGGRDKNIYQRDIRAQEDFVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPILKFCEHTAAVKAIAWSPHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPNMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGRTTIR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00180 496 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 439 472 - -
Bach10g00180 496 SUPERFAMILY WD40 repeat-like 178 478 IPR036322 GO:0005515
Bach10g00180 496 Pfam Anaphase-promoting complex subunit 4 WD40 domain 228 282 IPR024977 -
Bach10g00180 496 SMART WD40_4 344 386 IPR001680 GO:0005515
Bach10g00180 496 SMART WD40_4 432 471 IPR001680 GO:0005515
Bach10g00180 496 SMART WD40_4 218 258 IPR001680 GO:0005515
Bach10g00180 496 SMART WD40_4 174 215 IPR001680 GO:0005515
Bach10g00180 496 SMART WD40_4 302 341 IPR001680 GO:0005515
Bach10g00180 496 SMART WD40_4 261 298 IPR001680 GO:0005515
Bach10g00180 496 ProSiteProfiles Trp-Asp (WD) repeats profile. 226 267 IPR001680 GO:0005515
Bach10g00180 496 FunFam FIZZY-related 2 isoform 1 174 474 - -
Bach10g00180 496 Gene3D - 167 476 IPR015943 GO:0005515
Bach10g00180 496 ProSiteProfiles Trp-Asp (WD) repeats profile. 309 350 IPR001680 GO:0005515
Bach10g00180 496 ProSitePatterns Trp-Asp (WD) repeats signature. 458 472 IPR019775 -
Bach10g00180 496 MobiDBLite consensus disorder prediction 1 36 - -
Bach10g00180 496 ProSiteProfiles Trp-Asp (WD) repeats profile. 439 472 IPR001680 GO:0005515
Bach10g00180 496 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 44 493 IPR033010 GO:0010997|GO:0097027|GO:1904668
Bach10g00180 496 MobiDBLite consensus disorder prediction 477 496 - -
Bach10g00180 496 Pfam WD domain, G-beta repeat 306 341 IPR001680 GO:0005515
Bach10g00180 496 Pfam WD domain, G-beta repeat 346 386 IPR001680 GO:0005515
Bach10g00180 496 Pfam WD domain, G-beta repeat 435 471 IPR001680 GO:0005515
Bach10g00180 496 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 309 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00180 Bach-Chr10 1263495 1267558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00180 296 472 Miscellaneous Gene Families AT5G08390 24.157 6.54e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00180 K03364 - qsa:O6P43_024251 893.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00180 10 1263495 1267558 Bach4g00197 4 1310141 1315810 BWGD
Bach10g00180 10 1263495 1267558 Bach10g00180 10 1263495 1267558 ECH