Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g02009 ATGGACGAAGATCAAATTATGGGATTTGTGACTGCGTTCCTGAAGAAGAAAGGGTTTACGCAAACACAGCAGGCTTTCCAAGAAGAACTGCAACATAACAAGAACACTTCCTCGGCTAATTCTCTTGTTGAACCAGACATTGCAAAGCACATTCTCGCCTTCTCCGAATTGGAGAGTGGCCCTGCAACATATCATGATGGATATAGCAGACTAAGATCATGGACTTACAGCTCACTAGATCTGTATAAGCATGAGTTGCTTCGTGTGCTTTATCCAGTATTTATTCATTGCTTTATGGATCTGGTGGCAAAAGCGCATATACAAGAAGCTCGGAACTTTTTCAATAGCTTCCATGAAGACCATGAAATGATGCACTTGCGAGACCTTCGAAAGTTGGAAGGAGTTATTTCTCCTTCTCATCTGCAGGAAATGGAATTTGCCCATTCCCTTAGGCAGAGCGAATTTAACATAAAGATATGCGAGTATTCCTATGAGCTTCTGTTGCAACATCTGCACAGTACCCAGTCCACCACTATACTTGGCATTATCAATGAGCATATTAACTTTCAAGTTTCTCCTGGACAGCCTAGCTCTATTTCTGATGATCCAGAGGCTGTTACACTCACTGGAAGCAGCCAGGATGCTGCGAACCAGATAAACCAAAAAGAAATAAGTTGGGGGTTGCTTGAAGACTCTCTTGAAGAACGCCTGGAGAAGGCTGCAGTCTTGCTTTCAGACTCTGAAAAGGTAGAAGGGGAAACCAAAGAGGGAGAGAACGATGACAGTAAGAAAAGGTCAGTTGAAGGGGGAAAGCAAGGTACTTCAATGAAGAAGGTAAAAAAGGATAAGGCTGGAGGTGCAACAGGGAAAACTGCAAAACCTGAGGCTAACACTGTTTCTACAGCTCCGCGAGTTAAACCAGAACTTGCTTTACCCATGATTCCAATGGATGTAGAAGAGTCCGTCCTTGAAGATTTAAGGAACCGTGTGCAATTGAGTAGTGTTGCACTTCCATCTGTCAGCTTTTACACATTTATCAATACACATAATGGTTTAAGCTCTTCGTCAATATCCCATGATGGATCACTGGTCGCTGGAGGATTTTCTGACTCTTCACTGAAGGTTTGGGATATGGCAAAGCTTGGACAACAGCCCACCAGTTCTCCTTTGCAAGGTGAAAACGGCACATCACAAAATGAGCAAACGCTTGGGCAAATTGGGGGCAAAAGACAATATACGTTATATCAAGGTCATTCAGGGCCAGTTCATGCAGTCACTTTCTGTCCTGTCGGGGATTTTATTCTTTCCTCTTCAGCAGACTCGACAATTCGGTTATGGAGCACAAAGCTTAACACCAATCTTGTTTGCTACAAGGGTCATAATTATCCTGTCTGGGATGTTCAGTTTAGTCCGGTGGGGCATTATTTTGCCAGCTCTTCACATGACAGAACCGCTAGGATTTGGTCCATGGACAGTATACAGTCTTTAAGAATAATGGCAGGGCACTTGTCTGATGTTGATTGTGTGCAATGGCATGCCAACTGCAACTATATTGCTACCGGCTCCAGTGACAAAACAGTTCGACTATGGGATGTGCAGAGTGGGGAATGTGTCCGCATTTTCATTGGTCACAGGGGTATGATTTTATCTTTGGCAATGTCTCCTGATGGTCGCTATATGGCATCTGGTGATGAAGATGGCACAATCATGATGTGGGACCTCTCCAGTGGCCGTTGCCTCACACCCTTGATTGGTCACACCTCGTGTGTCTGGACACTTGCTTTCAGTTGCGAAGGTTCTCTCCTCGCATCTGGATCTGCTGATTGCACTGTAAAATTATGGGATGTAACTACAAGTACAAAGGTGCCCAGAACTGAAGAAAAAAGTGGAAATGCCAACAGACTCAGATCATTGAAAAGTTTGCCGACTAAATCTACTTCAGTTTATTCTTTGCGGGTACATTCCTCCAATACTTTATTGCGTGGTTTGGTTCTAATGCTGTTCTCTCTGCCTTAA 2016 0.439 MDEDQIMGFVTAFLKKKGFTQTQQAFQEELQHNKNTSSANSLVEPDIAKHILAFSELESGPATYHDGYSRLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKAHIQEARNFFNSFHEDHEMMHLRDLRKLEGVISPSHLQEMEFAHSLRQSEFNIKICEYSYELLLQHLHSTQSTTILGIINEHINFQVSPGQPSSISDDPEAVTLTGSSQDAANQINQKEISWGLLEDSLEERLEKAAVLLSDSEKVEGETKEGENDDSKKRSVEGGKQGTSMKKVKKDKAGGATGKTAKPEANTVSTAPRVKPELALPMIPMDVEESVLEDLRNRVQLSSVALPSVSFYTFINTHNGLSSSSISHDGSLVAGGFSDSSLKVWDMAKLGQQPTSSPLQGENGTSQNEQTLGQIGGKRQYTLYQGHSGPVHAVTFCPVGDFILSSSADSTIRLWSTKLNTNLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDSIQSLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRGMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWTLAFSCEGSLLASGSADCTVKLWDVTTSTKVPRTEEKSGNANRLRSLKSLPTKSTSVYSLRVHSSNTLLRGLVLMLFSLP 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 541 578 - -
Bach3g02009 671 SMART WD40_4 450 489 IPR001680 GO:0005515
Bach3g02009 671 SMART WD40_4 576 615 IPR001680 GO:0005515
Bach3g02009 671 SMART WD40_4 492 531 IPR001680 GO:0005515
Bach3g02009 671 SMART WD40_4 407 447 IPR001680 GO:0005515
Bach3g02009 671 SMART WD40_4 534 573 IPR001680 GO:0005515
Bach3g02009 671 SMART WD40_4 338 377 IPR001680 GO:0005515
Bach3g02009 671 Pfam WD40 associated region in TFIID subunit, NTD2 domain 59 187 IPR007582 -
Bach3g02009 671 ProSiteProfiles LIS1 homology (LisH) motif profile. 13 34 IPR006594 GO:0005515
Bach3g02009 671 Gene3D TFIID subunit TAF5, NTD2 domain 42 192 IPR037264 -
Bach3g02009 671 ProSitePatterns Trp-Asp (WD) repeats signature. 518 532 IPR019775 -
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 457 492 - -
Bach3g02009 671 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 2 660 - -
Bach3g02009 671 MobiDBLite consensus disorder prediction 248 288 - -
Bach3g02009 671 MobiDBLite consensus disorder prediction 193 212 - -
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 583 618 - -
Bach3g02009 671 CDD TAF5_NTD2 61 193 IPR007582 -
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats profile. 583 624 IPR001680 GO:0005515
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats profile. 499 540 IPR001680 GO:0005515
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats profile. 541 582 IPR001680 GO:0005515
Bach3g02009 671 Gene3D - 213 495 IPR015943 GO:0005515
Bach3g02009 671 ProSitePatterns Trp-Asp (WD) repeats signature. 364 378 IPR019775 -
Bach3g02009 671 SUPERFAMILY WD40 repeat-like 339 654 IPR036322 GO:0005515
Bach3g02009 671 Pfam WD domain, G-beta repeat 411 447 IPR001680 GO:0005515
Bach3g02009 671 Pfam WD domain, G-beta repeat 577 615 IPR001680 GO:0005515
Bach3g02009 671 Pfam WD domain, G-beta repeat 535 573 IPR001680 GO:0005515
Bach3g02009 671 Pfam WD domain, G-beta repeat 453 489 IPR001680 GO:0005515
Bach3g02009 671 Pfam WD domain, G-beta repeat 494 531 IPR001680 GO:0005515
Bach3g02009 671 Pfam WD domain, G-beta repeat 348 377 IPR001680 GO:0005515
Bach3g02009 671 SUPERFAMILY Taf5 N-terminal domain-like 50 192 IPR037264 -
Bach3g02009 671 CDD WD40 360 660 - -
Bach3g02009 671 PRINTS G protein beta WD-40 repeat signature 518 532 IPR020472 -
Bach3g02009 671 PRINTS G protein beta WD-40 repeat signature 602 616 IPR020472 -
Bach3g02009 671 PRINTS G protein beta WD-40 repeat signature 434 448 IPR020472 -
Bach3g02009 671 ProSitePatterns Trp-Asp (WD) repeats signature. 560 574 IPR019775 -
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats profile. 457 498 IPR001680 GO:0005515
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 415 447 - -
Bach3g02009 671 Gene3D - 575 661 IPR015943 GO:0005515
Bach3g02009 671 Gene3D - 496 574 IPR015943 GO:0005515
Bach3g02009 671 ProSitePatterns Trp-Asp (WD) repeats signature. 602 616 IPR019775 -
Bach3g02009 671 MobiDBLite consensus disorder prediction 248 304 - -
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 499 536 - -
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats profile. 415 447 IPR001680 GO:0005515
Bach3g02009 671 ProSiteProfiles Trp-Asp (WD) repeats profile. 345 378 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g02009 Bach-Chr3 27791878 27798752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach3g02009 329 632 Miscellaneous Gene Families AT5G08390 25.159 7.39e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g02009 K03130 - gmx:100781563 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02009 3 27791878 27798752 Bach12g00451 12 3052920 3060315 BWGD