Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00451 ATGGACGAAGATCAAATTATGGGATTTGTGACGGCATTCCTGAAGAAGAAAGGGTTCACGCAAACACAGCAGGCTCTCAAAGAAGAACTGCAACAGAATAAGAACTCTTCCTCTGTTGATTCTCTTGTCGAACCAGACATTGCCAAGCACATCCTCGCCTTCTCCAAATTGGAGAGTGGCCCTGCAAGATATCATGATGGATATAGCAGACTGAGGTCATGGACTTACAGTTCACTAGATCTGTACAAGCATGAGTTGCTTCGTGTGCTTTATCCAGTTTTTATCCATTGCTTTATGGATCTGGTGGCAAAAGGGCATATACAAGAAGCTCGGAACTTTTTCAATAGCTTCCGTGAAGACCATGAAATGATGCGCTTACGGGACCTTCAAAAGTTGGAAGGGGTTATTTCTCCTTCTCATCTGCAGGAAATGGAATTTGCCCATTCCCTTAGGCAGAGCAAATTCAACATAAAAATGTGTGAGTATTCCTATGAGCTTCTGTTGCAACATCTGCACAGTACCCAGTCCACCACTATACTCAGCATTATCAATGAGCATATTAACTTTCAAGTTTCTCCTGGACAACCTAGCTCTATCTCTGATGATCCAGAGGCTGTTACACTCACTGGAAGCAGCCAGGATGCTGCAAACCTGATAAACCAGAAAGAGATACGTTGGGGGTTGCTTGAAGACTCTTTTGAAGAACGTCTGGAGAAGGCCGGGGCCTTGCTTTCAGACTCTGAAAAGGCTGAAGGGGAAACCAAAGAGGGAGAGAACGATGACAGTAAGAAAAGGACAATTGAAGGAGGAAAGCAAGGTGCTTCAACGAAGAAGGTTAAAAAGGATAAGGCCGGAGGTGCAACAGGGAAAACTGCAAAACCTGAGGCTAACACTGTTTCTACAGCACCACGAGTTAAACCAGAACTTGCTTTACCCATAATTCCAATGGAGGTAGAACAGTCCATCCTTGAAGATTTAAGGAACCGTGTGCAATTGAGTAGTGTTGCATTACCATCCGTCAGCTTTTACACATTTATCAACACACATAATAGTTTGAGCTGTTCGTCAATATCCCATGATGGATCACTGGTTGCGGGAGGGTTTTCTGACTCTTCACTAAAGGTTTGGGATATGGCAAAGCTTGGACAACAGACCTCCAGTTCTCCTTCGCAGGGTGAAAATGGCACATCACAAAATGATCAAATACTTGGGCAAAGTGGGGGGAAGAGACAATATATGCTATATCAAGGTCATTCAGGGCCCGTACATGCAGTCAGTTTCAGTCCTTTTGGAGATTTTATTCTTTCCTCTTCAGCAGACTCAACAATTCGGTTATGGAGCACAAAGCTTAATGCCAATCTTGTTTGTTACAAGGGTCATAATTATCCTGTCTGGGATGTTCAGTTTAGTCCGATGGGGCATTATTTTGCCAGCTCTTCACATGACAGAACTGCTAGGATTTGGTCCGTGGACCGGATACAGCCTTTAAGAATAATGGCAGGGCACTTGTCTGATGTTGATTGTGTGCAATGGCATGCCAACTGCAACTACATTGCTACCGGCTCCAGTGACAAAACAGTTCGACTATGGGATGTACAGAGTGGGGAGTGTGTCCGCATTTTCATTGGTCACAGGAGTATGATTTTATCTTTGGCAATGTCTCCTGATGGTCGCTATATGGCATCTGGTGATGAAGATGGCACAATCATGATGTGGGACCTCTCCAGTGGCCGCTGTCTCACACCTTTGATTGGTCACACCTCGTGTGTCTGGACACTTGCTTTCAGTTGCGAAGGTTCTCTGCTCGCGTCTGGATCTGCCGATTGCACTGTGAAATTATGGGATGTAACTACAAGCACTAAGGTGCCCAGAACTGAAGAAAAAAGCGGAAATGCCAACAGACTTAGATCATTGAAAACTTTGCCGACCAAATCTACTCCAGTTTACTCTTTGCGGTTTTCTCGAAGGAATCTGCTTTTTGCAGCTGGAGCTTTTGCAAAGAGTCATTGA 2010 0.4458 MDEDQIMGFVTAFLKKKGFTQTQQALKEELQQNKNSSSVDSLVEPDIAKHILAFSKLESGPARYHDGYSRLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNSFREDHEMMRLRDLQKLEGVISPSHLQEMEFAHSLRQSKFNIKMCEYSYELLLQHLHSTQSTTILSIINEHINFQVSPGQPSSISDDPEAVTLTGSSQDAANLINQKEIRWGLLEDSFEERLEKAGALLSDSEKAEGETKEGENDDSKKRTIEGGKQGASTKKVKKDKAGGATGKTAKPEANTVSTAPRVKPELALPIIPMEVEQSILEDLRNRVQLSSVALPSVSFYTFINTHNSLSCSSISHDGSLVAGGFSDSSLKVWDMAKLGQQTSSSPSQGENGTSQNDQILGQSGGKRQYMLYQGHSGPVHAVSFSPFGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSVDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWTLAFSCEGSLLASGSADCTVKLWDVTTSTKVPRTEEKSGNANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGAFAKSH 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00451 669 Gene3D TFIID subunit TAF5, NTD2 domain 43 192 IPR037264 -
Bach12g00451 669 MobiDBLite consensus disorder prediction 242 288 - -
Bach12g00451 669 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 2 665 - -
Bach12g00451 669 ProSitePatterns Trp-Asp (WD) repeats signature. 518 532 IPR019775 -
Bach12g00451 669 SUPERFAMILY WD40 repeat-like 339 664 IPR036322 GO:0005515
Bach12g00451 669 SUPERFAMILY Taf5 N-terminal domain-like 50 192 IPR037264 -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 583 618 - -
Bach12g00451 669 CDD TAF5_NTD2 61 193 IPR007582 -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats profile. 457 498 IPR001680 GO:0005515
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats profile. 583 624 IPR001680 GO:0005515
Bach12g00451 669 Pfam WD domain, G-beta repeat 454 489 IPR001680 GO:0005515
Bach12g00451 669 Pfam WD domain, G-beta repeat 577 615 IPR001680 GO:0005515
Bach12g00451 669 Pfam WD domain, G-beta repeat 494 531 IPR001680 GO:0005515
Bach12g00451 669 Pfam WD domain, G-beta repeat 535 573 IPR001680 GO:0005515
Bach12g00451 669 Pfam WD domain, G-beta repeat 347 377 IPR001680 GO:0005515
Bach12g00451 669 Pfam WD domain, G-beta repeat 415 447 IPR001680 GO:0005515
Bach12g00451 669 CDD WD40 346 665 - -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats profile. 499 540 IPR001680 GO:0005515
Bach12g00451 669 Gene3D - 579 668 IPR015943 GO:0005515
Bach12g00451 669 Gene3D - 495 578 IPR015943 GO:0005515
Bach12g00451 669 ProSitePatterns Trp-Asp (WD) repeats signature. 364 378 IPR019775 -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats profile. 541 582 IPR001680 GO:0005515
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 457 491 - -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats profile. 415 447 IPR001680 GO:0005515
Bach12g00451 669 MobiDBLite consensus disorder prediction 242 301 - -
Bach12g00451 669 ProSitePatterns Trp-Asp (WD) repeats signature. 560 574 IPR019775 -
Bach12g00451 669 Gene3D - 238 494 IPR015943 GO:0005515
Bach12g00451 669 Pfam WD40 associated region in TFIID subunit, NTD2 domain 59 187 IPR007582 -
Bach12g00451 669 ProSitePatterns Trp-Asp (WD) repeats signature. 602 616 IPR019775 -
Bach12g00451 669 SMART WD40_4 534 573 IPR001680 GO:0005515
Bach12g00451 669 SMART WD40_4 450 489 IPR001680 GO:0005515
Bach12g00451 669 SMART WD40_4 576 615 IPR001680 GO:0005515
Bach12g00451 669 SMART WD40_4 408 447 IPR001680 GO:0005515
Bach12g00451 669 SMART WD40_4 492 531 IPR001680 GO:0005515
Bach12g00451 669 SMART WD40_4 338 377 IPR001680 GO:0005515
Bach12g00451 669 PRINTS G protein beta WD-40 repeat signature 434 448 IPR020472 -
Bach12g00451 669 PRINTS G protein beta WD-40 repeat signature 518 532 IPR020472 -
Bach12g00451 669 PRINTS G protein beta WD-40 repeat signature 602 616 IPR020472 -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 499 536 - -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 541 578 - -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 415 447 - -
Bach12g00451 669 MobiDBLite consensus disorder prediction 382 403 - -
Bach12g00451 669 ProSiteProfiles Trp-Asp (WD) repeats profile. 345 378 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00451 Bach-Chr12 3052920 3060315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00451 409 618 Miscellaneous Gene Families AT5G08390 31.776 1.01e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00451 K03130 - gmx:100781563 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02009 3 27791878 27798752 Bach12g00451 12 3052920 3060315 BWGD