Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01825 ATGGCGACGCCGTCGTTGGACGAAGAAACCGCGAAGAAAGTGTTACGACAAGTTGAGTTCTACTTCAGTGATAGCAATCTTCCTAGGGACAATTTTCTGAAGAAAACTATCGGTGAAAGCGATGATGGCATGGTTAGTTTGGCTTTGATTTGTTCATTTACTAGGATGAGAAATCATCTTAATCTGGGGACTGTAAAGCCAGATGAGGTGACTGAAGATACTGTTAAAGCTGTTGCTGAAACTTTGAGAAAATCGGATTCGCTCAAGATCTCTGAAGATGGGAAAAAAGTTGGCAGGACTACTGAACTTTCAAAGCTGGACGAGATAATTGAGCAGGTAGATGTGAGAACAATTGCTGCTTCACCATTTGAATATGATGTGAAGCGTGAAGACCTTGAGATCTTCTTTGGTCAATGTGCCAAGGTTAATAGTGTCAGGATGCCCCGTCATGTTGGAGACAAAAGATTCTTCTGTGGCACTGCCCTGGTTGAGTTTTCATCGGAGGAAGATGCTGAAAAGGTTTTGAAGCAAAGACTAGAGTATGCAGGGGTTGAGTTGGAATTAAAACCTAAGAAGGACTTTGATGAAGAGAGAGCCAATGACTTAGAAGAGTATGAAAAATCTTGTTCTTCAAATCACCATAATAACTCAAATGGAGAAGCAAGCTATCCTAGGGGCTTAATTATTGCCTTCAAACTCAAGAGATTATCTGATGGAGTTCCAGCGGAAAAAGATGGCACCTGTCAACATGCCAATGATGCTGATAGTGTCTCCAAAACGGATGAACAAAAACCCTTAACAGATGCTGCTGAAGAAACTGAACAAAAGGTTTCAGAAAATATTGACAATGGCAAAGAAAACCATGGGGAGAGTGAAGGAAAAGAAACTGAAGTTGATGAAAAGACTCGGGAAACGGATGAAAAACTTTCAGCTGCTTCTTGCAAGGATAACATGGATGTTGTCATGCGTGAGGATTTAAAGGTTGTCTTTGAAAAGTTTGGTACTGTGAAGTACATCGATTTCAAGATTGGAGTTGATTCAGGATACATTCGGTTTGAAGAACCTGATGCTGGTCAGAAAGCTCGTGCTGCCGCAGTTCTTTCTGAAAAGGGTGGTTTGGATGTTAAAAATTTTATTGCTACTCTAGATCCGGTGACTGGTGAGGCTGAAAGGGAATACTGGAATGCTATCCGTGGGAATCAAGAAAAGCACCGAGAAAACAAGAGTAGCCGAGGAAGGGGAGGAAGGTCTGGTAGAGGAGGAAAACATGCCCGCTCCAGGGAGAATGACTCAGCAATTGATCGCCCAAATAAAGCTCAGAAAACTGGAGCAGCATAA 1338 0.4215 MATPSLDEETAKKVLRQVEFYFSDSNLPRDNFLKKTIGESDDGMVSLALICSFTRMRNHLNLGTVKPDEVTEDTVKAVAETLRKSDSLKISEDGKKVGRTTELSKLDEIIEQVDVRTIAASPFEYDVKREDLEIFFGQCAKVNSVRMPRHVGDKRFFCGTALVEFSSEEDAEKVLKQRLEYAGVELELKPKKDFDEERANDLEEYEKSCSSNHHNNSNGEASYPRGLIIAFKLKRLSDGVPAEKDGTCQHANDADSVSKTDEQKPLTDAAEETEQKVSENIDNGKENHGESEGKETEVDEKTRETDEKLSAASCKDNMDVVMREDLKVVFEKFGTVKYIDFKIGVDSGYIRFEEPDAGQKARAAAVLSEKGGLDVKNFIATLDPVTGEAEREYWNAIRGNQEKHRENKSSRGRGGRSGRGGKHARSRENDSAIDRPNKAQKTGAA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01825 445 CDD LA_like_plant 10 99 - -
Bach3g01825 445 Gene3D - 6 106 IPR036388 -
Bach3g01825 445 Gene3D - 294 413 IPR012677 -
Bach3g01825 445 FunFam La protein 2 6 106 - -
Bach3g01825 445 MobiDBLite consensus disorder prediction 195 210 - -
Bach3g01825 445 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 124 177 IPR000504 GO:0003723
Bach3g01825 445 ProSiteProfiles xRRM domain profile. 302 430 IPR014886 GO:0003723
Bach3g01825 445 MobiDBLite consensus disorder prediction 255 310 - -
Bach3g01825 445 MobiDBLite consensus disorder prediction 397 413 - -
Bach3g01825 445 Gene3D - 107 200 IPR012677 -
Bach3g01825 445 PANTHER LUPUS LA PROTEIN-RELATED 10 288 IPR045180 -
Bach3g01825 445 ProSiteProfiles La-type HTH domain profile. 4 108 IPR006630 -
Bach3g01825 445 SMART rrm1_1 117 189 IPR000504 GO:0003723
Bach3g01825 445 SMART la 8 100 IPR006630 -
Bach3g01825 445 SUPERFAMILY RNA-binding domain, RBD 323 405 IPR035979 GO:0003676
Bach3g01825 445 CDD RRM1_La 117 189 - -
Bach3g01825 445 Pfam RNA binding motif 321 413 IPR014886 GO:0003723
Bach3g01825 445 MobiDBLite consensus disorder prediction 242 310 - -
Bach3g01825 445 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 116 201 IPR000504 GO:0003723
Bach3g01825 445 MobiDBLite consensus disorder prediction 397 445 - -
Bach3g01825 445 MobiDBLite consensus disorder prediction 421 435 - -
Bach3g01825 445 SUPERFAMILY "Winged helix" DNA-binding domain 6 102 IPR036390 -
Bach3g01825 445 SUPERFAMILY RNA-binding domain, RBD 108 194 IPR035979 GO:0003676
Bach3g01825 445 Pfam La domain 14 84 IPR006630 -
Bach3g01825 445 PRINTS Lupus La protein signature 17 34 IPR002344 GO:0003723|GO:0005634|GO:0006396|GO:1990904
Bach3g01825 445 PRINTS Lupus La protein signature 43 58 IPR002344 GO:0003723|GO:0005634|GO:0006396|GO:1990904
Bach3g01825 445 PRINTS Lupus La protein signature 157 175 IPR002344 GO:0003723|GO:0005634|GO:0006396|GO:1990904
Bach3g01825 445 MobiDBLite consensus disorder prediction 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01825 Bach-Chr3 26546914 26550801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01825 K11090 - qsa:O6P43_019295 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01825 3 26546914 26550801 Bach12g00608 12 4135095 4139084 BWGD
Bach3g01825 3 26546914 26550801 Bach3g01825 3 26546914 26550801 ECH