Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01642 TTGGAGTGGTGAGTTTTTGTGGAGATGTCAGGTGGTGGTGGATGTAGCATAGTATGGTTCAGAAGAGATCTGAGGATAGAGGATAATCCAGCACTGACGGCAGGAGTGAGAGCAGGAGCTGTGGTGGCAGTTTTCATCTGGGCACCTGAAGAAGAAGGCCAATACTATCCTGGCAGGGTCTCCAGGTGGTGGCTCAAGCAAAGTTTGGCTTTTCTCGATTCCTCTTTGAGGAATCTTGGCGCTCCTCTCATAACCAAGCGATCCACTGATAGTGTTTCTTCTCTACTAGAGGTTATCAAGTCCACTGGAGCTACCCAACTCTTTTTTAACCATTTATATGATCCCCTGTCACTTATGAGAGATCACCGAGCAAAGCAGGTTCTGACTTCTCAAGGCATAGCCGTACGGTCCTTCAATGCAGATTTACTGTATGAACCATGGGATGTCAATGATGCACATGGCCAGCCATTCACAACCTTTTCTGCTTTTTGGGAAAGATGCCTCAGCATGCCTTATGACCCAGAAGCACCCATACTTCCCCCTAAGAGGATTATTCCAGGTGATGTATCAAGGTGCCCTTGCGATACATTAGTGTTTGAAGATGAATCTGAGAAGGCAAGCAATGCGCTTCTTGCTCGAGCTTGGTCACCTGGGTGGAGCAATGCTGATAAGGCATTGACAACATTCATAAATGGTCCACTGATTGAGTACTCTAAAAATCGCAGGAAGGCTGACAGTGCCACAACCTCATTTCTCTCTCCCCATTTGCATTTTGGTGAGGTGAGTGTCAAAAAAGTGTTCCATCTTGTCCGCATTAGGCAAGTTTTATGGGCGAATGAAGGAAACAAGGCTGGTGAAGAAAGTGTGAACTTGTTTCTTAAATCTATTGGTCTTAGAGAATATTCAAGGTACATTAGTTTTAATCACCCCTATAGTCACGAACGGCCTCTTCTGGGCCATCTGAAGTTCTTTCCCTGGGTAGTGAATGAAGGGTATTTCAAGGCATGGAGACAAGGCAGAACTGGGTACCCATTGGTGGATGCTGGCATGAGAGAGTTGTGGGCAACTGGTTGGCTGCATGATCGGATACGTGTTGTGGTTTCCAGTTTCTTTGTCAAGGTTCTGCAGCTTCCTTGGAGATGGGGTATGAAGTATTTCTGGGATGCTCTATTGGATGCCGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATATCTGGTACTCTTCCTGATGGCCGTGAATTGGACCGAATAGATAATCCACAGTTTGAGGGATATAAATTTGATCCAAATGGAGAATATGTACGACGCTGGCTTCCAGAACTTGCAAGACTACCAACTGAATGGATACATCATCCATGGAATGCTCCAGAATCTGTACTGCAAGCTGCTGGAATTGAGCTGGGCTCCAATTACCCTCTTCCAATTGTGGGAATAGATGCTGCAAAAGCCAGGTTGCAAGAAGCACTATCAGAAATGTGGCAGCAAGAAGCAGCTTCAAGAGCTGCGATTGAAAATGGAACCGAGGAAGGGCTTGGAGACTCCTCTGAGTCAGCCCCTTTTGCCTTTCCTCAAGACATACAAATGGAAGAAAACCATGAACCTGTTAGGAATAACCCCCCTTCTGCTTCTCGTCGTTATGAGGATCAGATGGTCCCAAGCATCACTTCTTCTCTGTTGAGACTAGAAGAGGAAGAAGCTTCTTCGGATCTTCGAAACTCAACTGCAGATAGCAGAGCAGAAGTGCCAATGAATGTAAATGTACAACAAAATGCAAGAGTGACACCGAATCCAGGGGCAGGGGTGTTGCAGAGTCCTCATAGCAATACTAGACTGCAGCATAATAATATTGCAACGGAGCTGAGAATTCCAGCTGAAGATTCCACTGCAGAATCTTCAAGTAGTGGTAGGAGAGAAAGGGATGGAGGTGTAGTTCCAGTATGGTCTCCACCAAATTCTAGTTTCTCAGAGCAATATGTAGGAGATGAAAATGGTATAGGAGCAAGTTCATCTTATTTACCGAGGCATCCTCGGTCTCACGAAATACTGAATTGGAGGCGGCTATCTCAGACTGGGTAATCCGTATCTAATACAAGCAAGGGACTAGAAGCAGGGAGGTGGAGAATTTATTTCTGGTCTCATCTGCGGCCATTTCCTACCAGTCTTAACATGATTAACGGCTGACCTCCATTTATGTATCAAAACTCCATCTCTTGCGGGCACTTCATCCGCTTCAACTCTTGTACGCCATGTGTAGGCCTGCTGTATAGTATATATTGTCTAGTTAGGAAGAAAGACATAGTAT 2305 0.4555 MSGGGGCSIVWFRRDLRIEDNPALTAGVRAGAVVAVFIWAPEEEGQYYPGRVSRWWLKQSLAFLDSSLRNLGAPLITKRSTDSVSSLLEVIKSTGATQLFFNHLYDPLSLMRDHRAKQVLTSQGIAVRSFNADLLYEPWDVNDAHGQPFTTFSAFWERCLSMPYDPEAPILPPKRIIPGDVSRCPCDTLVFEDESEKASNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIRQVLWANEGNKAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDALLDADLESDALGWQYISGTLPDGRELDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKARLQEALSEMWQQEAASRAAIENGTEEGLGDSSESAPFAFPQDIQMEENHEPVRNNPPSASRRYEDQMVPSITSSLLRLEEEEASSDLRNSTADSRAEVPMNVNVQQNARVTPNPGAGVLQSPHSNTRLQHNNIATELRIPAEDSTAESSSSGRRERDGGVVPVWSPPNSSFSEQYVGDENGIGASSSYLPRHPRSHEILNWRRLSQTG 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01642 684 Pfam FAD binding domain of DNA photolyase 284 482 IPR005101 -
Bach3g01642 684 Coils Coil 471 491 - -
Bach3g01642 684 Gene3D - 135 294 - -
Bach3g01642 684 MobiDBLite consensus disorder prediction 584 603 - -
Bach3g01642 684 FunFam Deoxyribodipyrimidine photo-lyase 302 491 - -
Bach3g01642 684 NCBIfam cryptochrome photoreceptor 7 483 IPR014134 GO:0009785|GO:0009882
Bach3g01642 684 ProSitePatterns DNA photolyases class 1 signature 1. 333 345 IPR018394 -
Bach3g01642 684 MobiDBLite consensus disorder prediction 523 574 - -
Bach3g01642 684 Gene3D HUPs 9 207 IPR014729 -
Bach3g01642 684 ProSitePatterns DNA photolyases class 1 signature 2. 353 372 IPR018394 -
Bach3g01642 684 PANTHER CRYPTOCHROME 7 491 IPR002081 -
Bach3g01642 684 MobiDBLite consensus disorder prediction 608 684 - -
Bach3g01642 684 MobiDBLite consensus disorder prediction 527 549 - -
Bach3g01642 684 Pfam DNA photolyase 8 163 IPR006050 -
Bach3g01642 684 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 135 IPR006050 -
Bach3g01642 684 MobiDBLite consensus disorder prediction 641 657 - -
Bach3g01642 684 PRINTS DNA photolyase signature 144 160 IPR002081 -
Bach3g01642 684 PRINTS DNA photolyase signature 333 349 IPR002081 -
Bach3g01642 684 PRINTS DNA photolyase signature 392 406 IPR002081 -
Bach3g01642 684 PRINTS DNA photolyase signature 353 371 IPR002081 -
Bach3g01642 684 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 8 179 IPR036155 -
Bach3g01642 684 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 302 503 - -
Bach3g01642 684 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 195 489 IPR036134 -
Bach3g01642 684 Pfam Blue/Ultraviolet sensing protein C terminal 511 629 IPR020978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01642 Bach-Chr3 25191499 25194939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01642 K12118 - gmx:100786551 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01642 3 25191499 25194939 Bach12g00757 12 5273707 5276684 BWGD
Bach3g01642 3 25191499 25194939 Bach3g01642 3 25191499 25194939 ECH