Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00757 GGCGTGGTGAGTTTTTGTGGAGATGTCAGGTGGTGGATGTAGCATAGTATGGTTCAGAAGAGATCTGAGGGTAGAGGATAATCCAGCACTGACGGCAGGGGTGAGAGCAGGAGCTGTGGTTGCAGTTTTCATATGGGCACCTGAAGAAGAAGGTCGATACTATCCTGGCAGGGTCTCTAGGTGGTGGCTCAAGCAAAGTTTGGCTTTTCTGGATTCCTCTTTGAGGAGTCTTGGCGCTCGTCTTATAACCAAGCGATCTACAGATAGTGTTTCTTCTCTATTAGAGGTTGTCAAGTCCACTGGAGCCACCCAACTCTTTTTTAACCACTTATATGATCCCCTGTCACTTGTTAGAGATCACAGGGCAAAGGAGGTTCTGACTTCTCATGGCATAGCCGTACGTTCCTTCAATGCAGATTTACTGTATGAACCATGGGATGTCAATGATGCACATGGCCGACCATTCACCACTTTTTCTGCTTTTTGGGAAAGATGCCTCAGCATGTCTTATGACCCAGAAGCACCTCTGCTTCCCCCTAAAAGGATTATTCCAGGTGATGTATCAAGGTGCTCTTGTGATACATTAGTGTTTGAAGATGAATCTGAGAAGGCAAGCAATGCTCTTCTAGCTCGAGCTTGGTCACCTGGGTGGAGCAACGCTGATAAGGCATTGACGACATTCATAAATGGTCCACTGATTGAGTACTCAAAAAATCGCAGGAAGGCTGACAGTGCCACCACCTCATTTCTCTCTCCCCATTTGCATTTTGGTGAGGTGAGTGTCAAAAAAGTGTTCCATCTTGTCCGCATTAAGCAAGTTTTATGGGCGAATGAAGGAAACAAGGCTGGTGAAGAGAGTGTGAACTTGTTTCTTAAATCCATTGGTCTTAGAGAATATTCAAGGTACATTACTTTTAACCACCCCTATAGTCACGAACGGCCTCTTCTTGGCCATCTTATGTTCTTTCCTTGGGTAGTAAATGAAGGATACTTTAAGGCGTGGAGACAAGGCAGAACTGGGTACCCATTAGTGGATGCTGGCATGAGAGAGTTGTGGGCCACTGGTTGGCTGCATGATCGGATACGTGTTGTGGTTTCCAGTTTCTTTGTCAAGGTACTCCAGCTTCCTTGGAGATGGGGGATGAAATATTTCTGGGATACCCTCTTGGATGCTGATCTTGAGAGTGATGCTCTTGGTTGGCAGTACATATCTGGTACTCTCCCTGATGGCCGTGAATTTGACCGAATAGATAATCCACAGTTTGAGGGATACAAATTTGATCCAAATGGAGAATACGTCCGACGCTGGCTTCCAGAACTTGCAAGGTTACCAACTGAATGGATACATCATCCATGGAATGCACCAGAATCTGTATTACAGGCTGCTGGAATTGAGCTTGGGTCCAATTACCCTCTTCCAATTGTGGGAATAGATGCGGCAAAAGCCAGGTTGCAAGAAGCACTATCAGAAATGTGGCAACGAGAAGCAGCTTCAAGAGCTGCGATTGAAAATGGTACTGAAGAAGGGCTTGGAGACTCCTCTGAATCAGTGCCTAATGTCTTTCCTGAAGACATACAAATGGAAGAAAATCATGAACCTGTTAGGAATAATCCCCCTTCTGTTCCTCGGCGTTATCAAGATCAGATGGTCCCCAGCATCACTTCTTCTCTGTTGAGATTAGAAGAGGAAGAAGCTTCATCAGATCTTCGAAACTCAACAGCAGATAGCAGAGCAGAGGTGCCAATAAACGTAAATGTACAACAAAATGTAAGAGTGACATTGAACCCAGGGGCACAGGTGTTGCAGAGTCCTCATAACAATACTGGACTGCAGCATCATAATACTGCGACGGGGCTGAGGCTTACAGCCGAGGATTCTGCAACAGAATCTTCAAGTAGTGGTAGGAGAGAAAGGGATGGAGGTGTAGTTCCAGTATGGTCTCCACCAACTTCCAGTTTCTCAGAGCAATTTGTAGGTGATGAAAATGGTATAGGAGCAAGTTCATCTTATTTACAGAGGCATCCTCATTCCCACGAAATACTGAATTGGAGGCGGCTACCACAGACTGGGTGA 2074 0.4571 MSGGGCSIVWFRRDLRVEDNPALTAGVRAGAVVAVFIWAPEEEGRYYPGRVSRWWLKQSLAFLDSSLRSLGARLITKRSTDSVSSLLEVVKSTGATQLFFNHLYDPLSLVRDHRAKEVLTSHGIAVRSFNADLLYEPWDVNDAHGRPFTTFSAFWERCLSMSYDPEAPLLPPKRIIPGDVSRCSCDTLVFEDESEKASNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYITFNHPYSHERPLLGHLMFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKARLQEALSEMWQREAASRAAIENGTEEGLGDSSESVPNVFPEDIQMEENHEPVRNNPPSVPRRYQDQMVPSITSSLLRLEEEEASSDLRNSTADSRAEVPINVNVQQNVRVTLNPGAQVLQSPHNNTGLQHHNTATGLRLTAEDSATESSSSGRRERDGGVVPVWSPPTSSFSEQFVGDENGIGASSSYLQRHPHSHEILNWRRLPQTG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00757 683 PANTHER CRYPTOCHROME 6 490 IPR002081 -
Bach12g00757 683 PRINTS DNA photolyase signature 352 370 IPR002081 -
Bach12g00757 683 PRINTS DNA photolyase signature 143 159 IPR002081 -
Bach12g00757 683 PRINTS DNA photolyase signature 332 348 IPR002081 -
Bach12g00757 683 PRINTS DNA photolyase signature 391 405 IPR002081 -
Bach12g00757 683 MobiDBLite consensus disorder prediction 595 667 - -
Bach12g00757 683 Pfam FAD binding domain of DNA photolyase 283 481 IPR005101 -
Bach12g00757 683 Pfam Blue/Ultraviolet sensing protein C terminal 511 628 IPR020978 -
Bach12g00757 683 Gene3D HUPs 8 206 IPR014729 -
Bach12g00757 683 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Bach12g00757 683 Gene3D - 134 293 - -
Bach12g00757 683 ProSitePatterns DNA photolyases class 1 signature 1. 332 344 IPR018394 -
Bach12g00757 683 MobiDBLite consensus disorder prediction 640 667 - -
Bach12g00757 683 Pfam DNA photolyase 7 163 IPR006050 -
Bach12g00757 683 NCBIfam cryptochrome photoreceptor 6 482 IPR014134 GO:0009785|GO:0009882
Bach12g00757 683 MobiDBLite consensus disorder prediction 550 569 - -
Bach12g00757 683 FunFam Deoxyribodipyrimidine photo-lyase 301 490 - -
Bach12g00757 683 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 178 IPR036155 -
Bach12g00757 683 MobiDBLite consensus disorder prediction 595 622 - -
Bach12g00757 683 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 194 487 IPR036134 -
Bach12g00757 683 ProSitePatterns DNA photolyases class 1 signature 2. 352 371 IPR018394 -
Bach12g00757 683 MobiDBLite consensus disorder prediction 498 542 - -
Bach12g00757 683 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 301 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00757 Bach-Chr12 5273707 5276684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00757 K12118 - pop:7495156 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01642 3 25191499 25194939 Bach12g00757 12 5273707 5276684 BWGD
Bach12g00757 12 5273707 5276684 Bach12g00757 12 5273707 5276684 ECH