Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach3g01633 ATGGATGAGGAGCTGGGAAAGTGGCGGAGTGGAATTTCTCATGCACGATATCTCAGTATTCATCGTCGTCAACCTGAGCATGTGTCGATTACTTCCTCTGTTAGCAGAGTCTCTCTGACACCGGACTCTCCTGCTTCAAATTCTTTCTCTAATGGCTATCATTTTCCTGGCGACGCCCGCCGATGTTCGGTTCTATTTCAGGATTTTAAGCATCAACCAGCCAACGATCATTACTCTACTAAATTGTGGTTGGACTCTGAGTCACCGGATTTTCATGTTGGAAAGAACATCAGTGACAAGTGGGGGGAAAATCTGCGAATCTCTGAGGATTTCTCCAAAATGAACATTACAGATGGACAGGGGAATGAAATGAGAACCAAGGGACAAAAAATGACCTCCTACGGTTTAGGCTCTGCAACTTGCTCGTTAGATGCAAATATTCTCATCTGTACTGAGTCTGGTTGCCCGTATGAAGGTATTCGCAATGAAATTCTGGGTATACCATCCTCTAACTGTGGAGTTTCACCAAGTCTAATTCATGATAGGAAGTGTACATTGCCAGGCTCGGGAGAAGGATACCCTTTTGGTACCTCGGTAGAGTCTTCTCCGGCTCATGATCAGTCCAGCACTTTGCATTTGGGCTCTGGTTGGAAGAGGAACCAATTATATCATCTAAATCTAATGGAGCACAATAAGAAACAGGGAAGCAGTAGTTATGACGGACAAGCTCAATTGCAGAAGCCATCTATTCCCAGCCCTTACCTTTGTGATGGCTATATGAGCTCACAACTTTGTGGAATGGACTATGAAGGAGACTGGAATGACAAAAATCCCTTTAAATTTCACCCCACAAAGTTCGCTTTGAATATGGAAAATTCTTCACTTTGTTTTCCAACAATTAAACAGAGGACGAGGGCAGCTACCAACAATGAACTTCCCCAATTTCTTTCGTCCAACAGAAACGGAGCTGACCCTGTGGCCTTTAGACGTGATAAAAGTTTTATTATACAAGGAAAAGATATAAAGTATTGCATTGACGGAGAGTACAACTTTTTAAGCGGTTACAAAAAGAATTCCCACAATCCAATTGCGGGAGAGGAAGTTTCTGAACACAATTCCCGCGTTCCTGATAGTGAAATTCTTGAAAACAATAGCAGTATTGGTGGTGATTTCCCATTGCCGTTGCTACTAACTTTCTATTCTTGGGCTGATGTCCAAGTCTATATATTAAATCTGGCAAAGGATCAGAATGGTTGTCGCTACCTACAAAGGATTGTTGATGAGGGAACCAGTGAAGCTATACAAATAGTATTCGAGGGAATAATACATAACATAGTTGAACTTATGATAGACCCTTTCGGTAATTATCTTGTGCAGAAATTGTTGGATGTATGTGGAGAGGAAATGAAATTGCAGATAGTGTTCATGGTGACTAAAGAACCAGGGCAGCTTGTCAAAATCTCTTTAAACACTCACGGCACGCGGGTGGTACAGAAGCTGATTCAGACTCTCAACACTAGGCAACAAATTTCCCTAGTCAAGTCAGCTCTTCAACCTGGTTTTCTTGATCTTATTAAGGATCTAAACGGAAATCATGTCATACAACGTTGCTTGCAACGCCTTACCTGTGTAGATAATGAGTTTATTTTTGATGCCGCTGCAAAGTTCTGTGTTGACATAGCAACTCATCGACATGGATGTTGTGTACTGCAACGTTGCATTGATAATGCCGAAGGGAAATATCGAGATAGGCTGGTCACAGAAATATGTAGACACGGACTTCTCCTTGCTCAAGATCCTTTTGGAAATTATGTTGTTCAGTATATTATACAGATGCAGATCCCAACTGCCTCTGCCAAATTAGTTTCCCTGTTCAAAGGAAACTATGTTAACCTCTCAACACAAAAATTTAGCAGTCACGTGGTTGAAAAATGTCTAAAGCATGTGGCAGAGAGCAGACCAAGAATCGTCCGAGAATTGATGGCTGTGTCTAACTTTGAACAGTTGTTGCAAGACCCATATGCCAATTATGTCATTCAGTCAGCTCTCGCAGTTACCAAGGGCTCTCTTCATGCATCATTGGTCGAAGCAGTTCGCCCATACAAAATCTTGCGCACCAGCCCATATTGCAAGAGGATTTTCTCGGGAAATCTGCTTAAGAATTGA 2166 0.4206 MDEELGKWRSGISHARYLSIHRRQPEHVSITSSVSRVSLTPDSPASNSFSNGYHFPGDARRCSVLFQDFKHQPANDHYSTKLWLDSESPDFHVGKNISDKWGENLRISEDFSKMNITDGQGNEMRTKGQKMTSYGLGSATCSLDANILICTESGCPYEGIRNEILGIPSSNCGVSPSLIHDRKCTLPGSGEGYPFGTSVESSPAHDQSSTLHLGSGWKRNQLYHLNLMEHNKKQGSSSYDGQAQLQKPSIPSPYLCDGYMSSQLCGMDYEGDWNDKNPFKFHPTKFALNMENSSLCFPTIKQRTRAATNNELPQFLSSNRNGADPVAFRRDKSFIIQGKDIKYCIDGEYNFLSGYKKNSHNPIAGEEVSEHNSRVPDSEILENNSSIGGDFPLPLLLTFYSWADVQVYILNLAKDQNGCRYLQRIVDEGTSEAIQIVFEGIIHNIVELMIDPFGNYLVQKLLDVCGEEMKLQIVFMVTKEPGQLVKISLNTHGTRVVQKLIQTLNTRQQISLVKSALQPGFLDLIKDLNGNHVIQRCLQRLTCVDNEFIFDAAAKFCVDIATHRHGCCVLQRCIDNAEGKYRDRLVTEICRHGLLLAQDPFGNYVVQYIIQMQIPTASAKLVSLFKGNYVNLSTQKFSSHVVEKCLKHVAESRPRIVRELMAVSNFEQLLQDPYANYVIQSALAVTKGSLHASLVEAVRPYKILRTSPYCKRIFSGNLLKN 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach3g01633 721 ProSiteProfiles Pumilio RNA-binding repeat profile. 404 439 IPR001313 GO:0003723
Bach3g01633 721 ProSiteProfiles Pumilio RNA-binding repeat profile. 659 696 IPR001313 GO:0003723
Bach3g01633 721 MobiDBLite consensus disorder prediction 31 51 - -
Bach3g01633 721 FunFam Pumilio homolog 9 398 721 - -
Bach3g01633 721 ProSiteProfiles Pumilio RNA-binding repeat profile. 552 587 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 483 513 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 668 683 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 628 659 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 444 474 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 409 442 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 557 590 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 521 551 IPR001313 GO:0003723
Bach3g01633 721 Pfam Pumilio-family RNA binding repeat 595 610 IPR001313 GO:0003723
Bach3g01633 721 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 376 721 IPR033133 GO:0003723
Bach3g01633 721 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 209 714 - -
Bach3g01633 721 CDD Pumilio 397 715 IPR033712 GO:0003723
Bach3g01633 721 SMART pum_5 516 551 IPR001313 GO:0003723
Bach3g01633 721 SMART pum_5 479 514 IPR001313 GO:0003723
Bach3g01633 721 SMART pum_5 440 475 IPR001313 GO:0003723
Bach3g01633 721 SMART pum_5 552 587 IPR001313 GO:0003723
Bach3g01633 721 SMART pum_5 624 658 IPR001313 GO:0003723
Bach3g01633 721 SMART pum_5 588 623 IPR001313 GO:0003723
Bach3g01633 721 SMART pum_5 661 696 IPR001313 GO:0003723
Bach3g01633 721 SMART pum_5 404 439 IPR001313 GO:0003723
Bach3g01633 721 ProSiteProfiles Pumilio RNA-binding repeat profile. 588 623 IPR001313 GO:0003723
Bach3g01633 721 Gene3D - 398 717 IPR011989 -
Bach3g01633 721 ProSiteProfiles Pumilio RNA-binding repeat profile. 516 551 IPR001313 GO:0003723
Bach3g01633 721 ProSiteProfiles Pumilio RNA-binding repeat profile. 479 514 IPR001313 GO:0003723
Bach3g01633 721 ProSiteProfiles Pumilio RNA-binding repeat profile. 440 476 IPR001313 GO:0003723
Bach3g01633 721 SUPERFAMILY ARM repeat 408 714 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach3g01633 Bach-Chr3 25141067 25145373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach3g01633 - - pcin:129297951 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01633 3 25141067 25145373 Bach12g00767 12 5340367 5344895 BWGD
Bach3g01633 3 25141067 25145373 Bach3g01633 3 25141067 25145373 ECH