Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00767 ATGGATGAGGGGCTAGGGAAGTTGCGGAATGGAAATCCTTATGCACCATATAATTTTCATCGTCGTCAACCTGAGCATGTGTCCGTTAGTTCCTCTCTTGGCAGAGTCTCTCTGACACCGGACTCTCCTGCTTCAAATTCATTTTTTAATGGGTATCACTATCCAGGCGATGTCGGCCCGTATACAGCACCATTTCAGGATGTTAAGCATCAAACACTCAACGATCATTACTCCACTAAATTGTTGTTGGAGTCCGAGTCATCGAATTTTCATGTTGAAAACAACATCAGTGACAAGTTCATGGATGATCTGGGACTCTATGAGGATTTCCGTAGAATGAACATAACAGATGGACAGGGGAATGACACGAGAATCAAGGGACAAAAAATGGGCTCCCACGGGTTTGGCTCTCACACTCGTTCATTGGATGCAAATATTCCCATCTTTACTGAATCTGGTCGCTCATACGAAGAAGGTATTCGAAATGGAATTCTGGGTACACCATCCTATAACTTTGGAGTTTCGCCAAGTCTAATTCATGATAGGAAGTGGACATTGCCTTCCTCGAGAAAAGGATACGCTTTTGGTACCTCGGACGAGTCTTCCCTCGCTCATGATCAGTCCAGCGCTTTGTACTTGGGCTCTAGTTGGAAGAGAAACCAATTATATCATCTAAATTTAATGGAGCACGAGAAGAAACAGGCAAATACTTGTGACGGACAAGTTCAATTGCAGAAGCCATTTATTCCCAGTCCTTATTTTTGTGATGGCTATATGGGCTCACAACTTTGTGGAATGGACTATGAAGGAGGCTGGGACGCCAAAAATCTCTTGAAATTCTCTGAATGGATGCACCCCACCAAGCTTGCTTCCAATCTGCAAAATCCATCACATTGTTGTCCAACAACCAAACAGAGGGCCAGGGCAGCTACCGACAATCAACTTCCTCAATTTCTTTCGTCCAACAGAAATGGAGCTGACCCCGTGGCCTTTAGATGTGATAATGGTTATATTATACAAGGAAAAGATATAAAGTATTGCATTGACAGAGGCTGCAATTCTTTAAGCGGTTGCGAAAAGAATTTTCACAATCGAATTACGGGAGAGGAAGTTTCTGAACACAACTCCCATCCTCCTGATAGTGAAATTTTTGAAAACAATAGCAGCATTGGTGGTGATTTCCCACTGCCGTTGCTACTAACTTTCTACTCTTTGGCTGAGGTCCAAGCCTACATATTCAATCTGGCAAAAGATCAGAATGGTTGTCGCTACCTACAAAGGATTGTTGATGACGGAACCAGTGAAGCAGTGCAAATAGTGTTCGAGGGAATAATACATAATGTCGTTGATCTTATGATAGATCCTTTTGGTAATTATCTTGTGCAGAAATTGTTGGATGTATGCGGAGAGGAAATGAAATTGCAGATTGTGTTCAAGGTGACTGAAGAACCAGGGCTGCTTGTCAAAATCTCTTTGAACACCCACGGCACACGGGTGGTACAAAAGTTGATTGAGACTATCAACACTAGGCAACAAATTTCACTAGTCAAGTCAGCTCTTCAACCAGATTTTCTTGATCTTATTAAGGATCTGAATGGAAATCATGTCATACAACGTTGCTTACAATACCTTACCCGTCAAGATAATGAGTTTATTTTTTATGCTGCCGCAAAGTTCTGTGTTGACATAGCAACTCATCGACATGGGTGTTGTGTACTGCAACGTTGTATTGATAAAGCGATAGGGAAGTATCGAGATAAGCTGGTCACAGAAATATGTAGACACGGGCTTCTCCTTGCTCAAGATCCTTTTGGAAATTATGTTGTTCAGTATATTATAGAGATGCAGATCCCAGCTGCCTCTGCCAAACTGATTTCTTTGTTCAAAGGGAACTATGTTAACCTCTCAACACAAAAATCTAGCAGTCATGTGGTTGAAAAATGTCTAAAGTATGTTGCAGAGAGCAGACCAAGAATTGTCCGAGAATTGATGGCTGTATGTAACTTTGAACAGTTGTTGCAAGACCCATATGCCAACTATGTCATTCAATCAGCTCTTGCAGTTACCAAGGGCTCTCTTCATGCATCATTGGTTGAAGCAGTTCGCCCTTACAAATCCTTGCGCACCAGCCCATATTGCAAGAGGATTTTCTCGGGAAATCTCCTTAAGAACTAA 2175 0.4207 MDEGLGKLRNGNPYAPYNFHRRQPEHVSVSSSLGRVSLTPDSPASNSFFNGYHYPGDVGPYTAPFQDVKHQTLNDHYSTKLLLESESSNFHVENNISDKFMDDLGLYEDFRRMNITDGQGNDTRIKGQKMGSHGFGSHTRSLDANIPIFTESGRSYEEGIRNGILGTPSYNFGVSPSLIHDRKWTLPSSRKGYAFGTSDESSLAHDQSSALYLGSSWKRNQLYHLNLMEHEKKQANTCDGQVQLQKPFIPSPYFCDGYMGSQLCGMDYEGGWDAKNLLKFSEWMHPTKLASNLQNPSHCCPTTKQRARAATDNQLPQFLSSNRNGADPVAFRCDNGYIIQGKDIKYCIDRGCNSLSGCEKNFHNRITGEEVSEHNSHPPDSEIFENNSSIGGDFPLPLLLTFYSLAEVQAYIFNLAKDQNGCRYLQRIVDDGTSEAVQIVFEGIIHNVVDLMIDPFGNYLVQKLLDVCGEEMKLQIVFKVTEEPGLLVKISLNTHGTRVVQKLIETINTRQQISLVKSALQPDFLDLIKDLNGNHVIQRCLQYLTRQDNEFIFYAAAKFCVDIATHRHGCCVLQRCIDKAIGKYRDKLVTEICRHGLLLAQDPFGNYVVQYIIEMQIPAASAKLISLFKGNYVNLSTQKSSSHVVEKCLKYVAESRPRIVRELMAVCNFEQLLQDPYANYVIQSALAVTKGSLHASLVEAVRPYKSLRTSPYCKRIFSGNLLKN 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00767 724 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 379 724 IPR033133 GO:0003723
Bach12g00767 724 ProSiteProfiles Pumilio RNA-binding repeat profile. 662 699 IPR001313 GO:0003723
Bach12g00767 724 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 189 717 - -
Bach12g00767 724 ProSiteProfiles Pumilio RNA-binding repeat profile. 519 554 IPR001313 GO:0003723
Bach12g00767 724 ProSiteProfiles Pumilio RNA-binding repeat profile. 555 590 IPR001313 GO:0003723
Bach12g00767 724 CDD Pumilio 412 718 IPR033712 GO:0003723
Bach12g00767 724 Gene3D - 400 721 IPR011989 -
Bach12g00767 724 ProSiteProfiles Pumilio RNA-binding repeat profile. 407 442 IPR001313 GO:0003723
Bach12g00767 724 ProSiteProfiles Pumilio RNA-binding repeat profile. 443 479 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 591 626 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 664 699 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 482 517 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 519 554 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 443 478 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 555 590 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 627 661 IPR001313 GO:0003723
Bach12g00767 724 SMART pum_5 407 442 IPR001313 GO:0003723
Bach12g00767 724 ProSiteProfiles Pumilio RNA-binding repeat profile. 591 626 IPR001313 GO:0003723
Bach12g00767 724 SUPERFAMILY ARM repeat 405 717 IPR016024 -
Bach12g00767 724 FunFam Pumilio homolog 9 400 724 - -
Bach12g00767 724 MobiDBLite consensus disorder prediction 1 36 - -
Bach12g00767 724 ProSiteProfiles Pumilio RNA-binding repeat profile. 482 517 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 560 593 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 598 614 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 671 686 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 524 553 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 412 445 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 488 516 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 631 662 IPR001313 GO:0003723
Bach12g00767 724 Pfam Pumilio-family RNA binding repeat 447 477 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00767 Bach-Chr12 5340367 5344895 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00767 - - pcin:129297951 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01633 3 25141067 25145373 Bach12g00767 12 5340367 5344895 BWGD
Bach12g00767 12 5340367 5344895 Bach12g00767 12 5340367 5344895 ECH