Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach2g02089 ATGGAATACCATCGATCTTATAGTGACTCGGGCTCTTCATCCCACTCTAACCACCGTCAAACATCACTAACTTCTCTGTCTTCACAACGCAGCCTTGTATCAGTTCCTTCCCTCAACTCACAATCTCAGGACCAGCTAGTAAACCATCCTTCCAACGCCTATCATCACTGCCTCACAACTCTCAAAGGCCACACATCCTACATATCCTCTATATCCATTTCTGGGAAATTCCTCTATACAGGTTCATCTGACAGAGAAATCAGATCCTGGAATCGTACTCCTTTTGACTCTGAATTTGATTCTGAACATTCAATCACAAACATGGTAGTTGCTGGAAAGGGTGCAGTGAAGTCCCTAGTAGTTCAATCTGATAGGCTTTTTAGTGCTCACCAAGATCACAAAATCAGGGTATGGAAGATTAGCAACTACGAGCCTGACCAACAGAAGTACACCCGTTTAGCCACCCTTCCAACATTTGGTGACCGAGCCTGTAAGGTTCTGATCCCCAAGAACCACGTTCAGATTAGAAGGCACAAAAAATGCACCTGGGTTCATCACGTTGACACAGTTTCTGCTCTGGCCTTGTCCAGGGACGAGAGCTTGCTCTATTCAGTTTCATGGGATAGGACGATCAAAATTTGGCGAACCAGTGATTTCACCTGTTTAGAATCAATAAGCAACGCTCATGATGATGCCATAAACGCAGTTACACTTTCGGATGATGGGCATATTTACACAGGATCTGCAGATAAGAGAATTAAGGTGTGGAAGAAAGGCGAAGGAGATAAGAAACATTCTCTGGTTGATACGTTAGAGAAACACAACTCTGGGATTAATGCTTTAGCTCTCAGCAGTGACGGGTCTCTGTTATATTCAGGTGCATGTGACAGATCCATATTGGTTTGGGAGAAGGATGAAGATGGCAAAATGATGGTGGTGGGTGCGCTTAGGGGGCACACCAAGTCCATACTGTGCTTGGCTGTGGTCTCGGATTTGGTTTGTAGTGGCTCTGCAGATAAAACAATTAGAGTCTGGAGAGGCGTTCACAGAGAGTATTCTTGTTTAGCTGTTTTAGAAGGGCATAGGGGTCCGATTAAGTGCTTAACTGCAGTGGTTGATCGTTATAACCCCTCTGAAGAATCTTTTCTACTCTATAGTGGCAGTTTGGACTGCGACATTAAGGTCTGGCAGATATTTCTTCCTATTCTCTAG 1212 0.4439 MEYHRSYSDSGSSSHSNHRQTSLTSLSSQRSLVSVPSLNSQSQDQLVNHPSNAYHHCLTTLKGHTSYISSISISGKFLYTGSSDREIRSWNRTPFDSEFDSEHSITNMVVAGKGAVKSLVVQSDRLFSAHQDHKIRVWKISNYEPDQQKYTRLATLPTFGDRACKVLIPKNHVQIRRHKKCTWVHHVDTVSALALSRDESLLYSVSWDRTIKIWRTSDFTCLESISNAHDDAINAVTLSDDGHIYTGSADKRIKVWKKGEGDKKHSLVDTLEKHNSGINALALSSDGSLLYSGACDRSILVWEKDEDGKMMVVGALRGHTKSILCLAVVSDLVCSGSADKTIRVWRGVHREYSCLAVLEGHRGPIKCLTAVVDRYNPSEESFLLYSGSLDCDIKVWQIFLPIL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach2g02089 403 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Bach2g02089 403 PRINTS G protein beta WD-40 repeat signature 333 347 IPR020472 -
Bach2g02089 403 PRINTS G protein beta WD-40 repeat signature 384 398 IPR020472 -
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 316 345 - -
Bach2g02089 403 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 14 398 IPR045182 -
Bach2g02089 403 CDD WD40 57 397 - -
Bach2g02089 403 Gene3D - 263 400 IPR015943 GO:0005515
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 183 224 IPR001680 GO:0005515
Bach2g02089 403 FunFam BnaA09g28200D protein 173 261 - -
Bach2g02089 403 Gene3D - 162 262 IPR015943 GO:0005515
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 271 303 - -
Bach2g02089 403 SMART WD40_4 176 215 IPR001680 GO:0005515
Bach2g02089 403 SMART WD40_4 351 397 IPR001680 GO:0005515
Bach2g02089 403 SMART WD40_4 54 91 IPR001680 GO:0005515
Bach2g02089 403 SMART WD40_4 218 257 IPR001680 GO:0005515
Bach2g02089 403 SMART WD40_4 309 346 IPR001680 GO:0005515
Bach2g02089 403 SMART WD40_4 264 303 IPR001680 GO:0005515
Bach2g02089 403 SMART WD40_4 102 139 IPR001680 GO:0005515
Bach2g02089 403 MobiDBLite consensus disorder prediction 1 26 - -
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 183 214 - -
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 316 345 IPR001680 GO:0005515
Bach2g02089 403 Pfam WD domain, G-beta repeat 314 345 IPR001680 GO:0005515
Bach2g02089 403 Pfam WD domain, G-beta repeat 57 91 IPR001680 GO:0005515
Bach2g02089 403 Pfam WD domain, G-beta repeat 221 257 IPR001680 GO:0005515
Bach2g02089 403 Pfam WD domain, G-beta repeat 353 396 IPR001680 GO:0005515
Bach2g02089 403 Pfam WD domain, G-beta repeat 268 302 IPR001680 GO:0005515
Bach2g02089 403 Pfam WD domain, G-beta repeat 184 214 IPR001680 GO:0005515
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 61 91 IPR001680 GO:0005515
Bach2g02089 403 Gene3D - 27 161 IPR015943 GO:0005515
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 271 312 IPR001680 GO:0005515
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 226 266 IPR001680 GO:0005515
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 226 257 - -
Bach2g02089 403 SUPERFAMILY WD40 repeat-like 42 398 IPR036322 GO:0005515
Bach2g02089 403 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 61 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach2g02089 Bach-Chr2 28170609 28171820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach2g02089 176 398 Miscellaneous Gene Families AT5G08390 25.991 2.33e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach2g02089 - - qsa:O6P43_022753 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00972 10 6978150 6979418 Bach2g02089 2 28170609 28171820 BWGD
Bach10g00972 10 6978150 6979418 Bach2g02089 2 28170609 28171820 ECH
Bach2g02089 2 28170609 28171820 Bach2g02089 2 28170609 28171820 ECH