Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00972 ATGGGACTGCTTCAATGTCCCCTATGCTGCCACTCAGAAGATCAAGAACCACAATCTCATGATCACTCCCATCACCTTCATTCAGAATCATCAACCTCTTCTCTATCTTCTCAGCCAAGCCTACCCTCTGTTCCTTCCCTCACTCCACCATCTCATCCCCATCAAGAACTCCCCCAAACCACCCACCAACTCCTCACCACCCTCAAGGGCCACTCCTCACCCATCTCCTCCCTCGCTCTCCATGGTAAATTCCTCTACACCGCCTCCTCCAACAGCGAGATTCGAGCATGGAAAAAAGACCCTTTTGCTCTTCAAGCCTCTAACAGTTCCAATAACGTGGTCGCAATCAGCAATGGAGCTATCAAGTCACTGGTGATTCTGGGTGATAAGCTGTTTAGTGCTCACCAAGACTACAAAATCAGAGTCTGGAAAATCGAAGACAATAATCCAAACCGGAGATTCAGATGCCTAGCCACCCTTCCCACCCTTAATGATCGCTTTTCCAAATTGTTCTTCGCCAAAAACTTCGTTGAGGTTCGGCGGCACAAAACATGCACGTGGGTTCATCACGTTGACACCGTCTCTGCTCTTGCTCTGTCCGGAGACGGCACTCTGCTTTACTCTGCTTCCTGGGACAGAACATTCAAAATCTGGAGAACCTCGGATTTCAAGTGTCTAGAGTCAGTGAGGAACGCGCACGAGGATGCAATCAACGCCTTGGTTTTGTCCAATGATGGGTTTGTGTACACGGGTTCTGCAGATAAGAAGATCAAGGTCTGGAAGAAGCAAGCAGGGGAGAAAAAGCACAGTCTTTTGGCTACGCTGGAGAAGCACAAATCTGCAGTGAATGCTCTGGCTCTTGGGAGAGATGGGTCTGTTTTATATTCAGGTGCTTGTGACAGATCAATCTTGGTGTGGGAGAAAGATAGCAGCGACACAAATGGTGGGGGAAACATGGTGTTGGTGGGTGCTCTGAGAGGGCACACCGAGGCCATCTTGTGCTTGGCGGCAGCGGCGCCGGACTTGGTATGCAGTGGATCCGCCGATAAGAGTGTTAGGATATGGAGGAGACCAGGGGTTGACAACAGTTACTCATGCCTGGCTGTGTTACAGGGCCATACACGGCCTGTGAAGTGCTTGGCTCTGGAAGTTGACCGTAACAGAGACAATAATGGTGGTTCTGATTCTAATACTACGTCTTATCTGGTTTACAGTGGTAGTTTGGATTGTGACATTAAGGTGTGGAAAATACTGGTGCCCTTGTTTTGA 1269 0.4925 MGLLQCPLCCHSEDQEPQSHDHSHHLHSESSTSSLSSQPSLPSVPSLTPPSHPHQELPQTTHQLLTTLKGHSSPISSLALHGKFLYTASSNSEIRAWKKDPFALQASNSSNNVVAISNGAIKSLVILGDKLFSAHQDYKIRVWKIEDNNPNRRFRCLATLPTLNDRFSKLFFAKNFVEVRRHKTCTWVHHVDTVSALALSGDGTLLYSASWDRTFKIWRTSDFKCLESVRNAHEDAINALVLSNDGFVYTGSADKKIKVWKKQAGEKKHSLLATLEKHKSAVNALALGRDGSVLYSGACDRSILVWEKDSSDTNGGGNMVLVGALRGHTEAILCLAAAAPDLVCSGSADKSVRIWRRPGVDNSYSCLAVLQGHTRPVKCLALEVDRNRDNNGGSDSNTTSYLVYSGSLDCDIKVWKILVPLF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00972 422 CDD WD40 64 416 - -
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 187 218 - -
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 275 307 - -
Bach10g00972 422 MobiDBLite consensus disorder prediction 14 28 - -
Bach10g00972 422 FunFam BnaA09g28200D protein 177 265 - -
Bach10g00972 422 MobiDBLite consensus disorder prediction 13 58 - -
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 325 355 IPR001680 GO:0005515
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 228 IPR001680 GO:0005515
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 230 261 - -
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 68 98 IPR001680 GO:0005515
Bach10g00972 422 Gene3D - 269 420 IPR015943 GO:0005515
Bach10g00972 422 Pfam WD domain, G-beta repeat 271 306 IPR001680 GO:0005515
Bach10g00972 422 Pfam WD domain, G-beta repeat 187 218 IPR001680 GO:0005515
Bach10g00972 422 Pfam WD domain, G-beta repeat 63 97 IPR001680 GO:0005515
Bach10g00972 422 Pfam WD domain, G-beta repeat 224 261 IPR001680 GO:0005515
Bach10g00972 422 Pfam WD domain, G-beta repeat 322 355 IPR001680 GO:0005515
Bach10g00972 422 Pfam WD domain, G-beta repeat 365 416 IPR001680 GO:0005515
Bach10g00972 422 SMART WD40_4 222 261 IPR001680 GO:0005515
Bach10g00972 422 SMART WD40_4 61 98 IPR001680 GO:0005515
Bach10g00972 422 SMART WD40_4 107 144 IPR001680 GO:0005515
Bach10g00972 422 SMART WD40_4 318 356 IPR001680 GO:0005515
Bach10g00972 422 SMART WD40_4 268 307 IPR001680 GO:0005515
Bach10g00972 422 SMART WD40_4 180 219 IPR001680 GO:0005515
Bach10g00972 422 SMART WD40_4 363 416 IPR001680 GO:0005515
Bach10g00972 422 Gene3D - 179 268 IPR015943 GO:0005515
Bach10g00972 422 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 20 417 IPR045182 -
Bach10g00972 422 SUPERFAMILY WD40 repeat-like 61 417 IPR036322 GO:0005515
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 275 307 IPR001680 GO:0005515
Bach10g00972 422 Gene3D - 56 178 IPR015943 GO:0005515
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 325 355 - -
Bach10g00972 422 ProSiteProfiles Trp-Asp (WD) repeats profile. 230 270 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00972 Bach-Chr10 6978150 6979418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00972 206 416 Acyl Lipid Metabolism Gene Families AT3G18860 25.943 2.96e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00972 - - qsa:O6P43_033115 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00972 10 6978150 6979418 Bach2g02089 2 28170609 28171820 BWGD
Bach10g00972 10 6978150 6979418 Bach2g02089 2 28170609 28171820 ECH
Bach10g00972 10 6978150 6979418 Bach10g00972 10 6978150 6979418 ECH