Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g02177 ATGGCCCTCCAAAGGCATTCTCTTCTTCCATTCTTCTTCATCATCATTTCTTTTGTTGCTTGTCATTGCACTAATTTGCAACAAGAGGACCCACTTTATATAAATGTTGATGATGATTTATCTTGCATTGATGATGGTGCGACATTCAAGAACTTGATCAAACAGAGCACGGATGTTTTGAGATTGAAGAGTTTTGACAAGTTAGGTAGCAAATCTTCTTCACCTAAAACGATCAATGTCAATGATTATGGAGCTGAAGGGGATGGAAAAACTGATGATACAGAGGCATTTGAGGAGGCTTGGGCAGTAGCATGTTCTTCTGGGGAACCAGTTAAGCTTGTGGTGCCTGATAAGAGTTATCTACTTATGCCAATTAGATTCTCTGGCCCATGCAAATCTAACATTGACGTTCAGATTTCTGGCACCCTTGAAGCATCTGATGACCCATCAGATTACAGCAAAGACCGCAATCACTGGATTATTTTTGATAGTATAGAAAGTTTATCAGTTCAAGGTGGTGGAACCATTAACGGAAATGGAAACATATGGTGGGAAAACTCATGCAAAAGGAACAAAACGAATGCTGTGACTTTCTATAATTGTGAGGATTTGTTAGTTCAGGACTTGAACTTCAAAGATTCCCAGCAAATGCATGTTTCTTTCCAGGACAGCATCAACGTTAAAGTTTCTGGTCTCACAGTAACTGCACCTGGGGATAGCCCTAACACCGATGGAATTCATGTCACAAATACCCAAAACATCCAAATCTCAAGCTCCGTTATTGCAACTGGCGATGATTGTATATCAATTGTAAGTGGATCCAAGAATGTAGAAGCCACAGACATAACCTGCGGACCAGGTCATGGTATCAGCATCGGAAGCTTAGGGAAGGGAAAGTCTAAGGATTTTGTTTCAGCAGTAACAGTGAATGGAGCTAAGTTTTCTGGAACTACAAATGGAGTTAGAATTAAGACATGGCAGGGAGGGTCAGGAAGTGCAAGCAACATCAAGTTTCAGAACATTGAAATGGACAATGTGACCAACCCCATAATAATAAACCAGTACTACTGTGACCAAAAGAAGCCATGCAAAGAGGAGCGCTCTGCGGTTCAGATTAAGAATGTGATATACCAGAACATACAAGGAACAAGTGCTTCTGATGTTGCTGTGAAGTTTGATTGCAGCAAGAAGTATCCATGCCAGGGAATAGTGTTGCAGAACATAGGCCTGCAACGTGAGGGAGGAGAAGCTGCAGAAGCTTATTGTAAGAATGTTCAGTTGTTCTACATTGGAGACATTAGAGACGTTTACCCTCGCTGCCCATAG 1326 0.414 MALQRHSLLPFFFIIISFVACHCTNLQQEDPLYINVDDDLSCIDDGATFKNLIKQSTDVLRLKSFDKLGSKSSSPKTINVNDYGAEGDGKTDDTEAFEEAWAVACSSGEPVKLVVPDKSYLLMPIRFSGPCKSNIDVQISGTLEASDDPSDYSKDRNHWIIFDSIESLSVQGGGTINGNGNIWWENSCKRNKTNAVTFYNCEDLLVQDLNFKDSQQMHVSFQDSINVKVSGLTVTAPGDSPNTDGIHVTNTQNIQISSSVIATGDDCISIVSGSKNVEATDITCGPGHGISIGSLGKGKSKDFVSAVTVNGAKFSGTTNGVRIKTWQGGSGSASNIKFQNIEMDNVTNPIIINQYYCDQKKPCKEERSAVQIKNVIYQNIQGTSASDVAVKFDCSKKYPCQGIVLQNIGLQREGGEAAEAYCKNVQLFYIGDIRDVYPRCP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g02177 441 SMART pbh1 304 325 IPR006626 -
Bach1g02177 441 SMART pbh1 333 354 IPR006626 -
Bach1g02177 441 SMART pbh1 251 272 IPR006626 -
Bach1g02177 441 SMART pbh1 224 250 IPR006626 -
Bach1g02177 441 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Bach1g02177 441 Pfam Glycosyl hydrolases family 28 105 426 IPR000743 GO:0004650|GO:0005975
Bach1g02177 441 PANTHER - 76 425 - -
Bach1g02177 441 Gene3D - 67 431 IPR012334 -
Bach1g02177 441 ProSitePatterns Polygalacturonase active site. 281 294 IPR000743 GO:0004650|GO:0005975
Bach1g02177 441 SUPERFAMILY Pectin lyase-like 73 431 IPR011050 -
Bach1g02177 441 FunFam Polygalacturonase QRT2 64 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g02177 Bach-Chr1 33945401 33947771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g02177 52 440 Glycoside Hydrolase AT2G41850 57.143 3.14e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g02177 K01184 - gmx:100817828 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g02177 1 33945401 33947771 Bach8g01143 8 7641087 7643529 BWGD
Bach1g02177 1 33945401 33947771 Bach1g02177 1 33945401 33947771 ECH