Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01789 ATGGATTTTTCAAATTCCACAAGGATAGTGTATGATAGAATCCAGAAATTGGAGCCTGAAAATGTCTCAAAGATTATAGGGTATCTTCTGCTAGAAAGCCATGGTGACCATGACATGATCAGACTAGCATTCTGCTCTGATAATATGATCCAGTCTGAAATTAACAAAGCCAAGATCAATCTTGGCTTATCGAAACCAGTAGTTTCTGCTTCAATCTCTCCCTTTCAAGTGGACCATCCAACAGTACTGGACCTGCCTCAACAGCTCACACCTTTCTCCCCAGTTTCATCTCACTGCATTTTATCTCCATCATCTGTTGCAAGAAGTGGAAATAAATATTGGGACCCTCAAGTTCCTGCTAGTCAGCAACTAGTGCATAATGTGGATTTTGTGTCACCAGCCTATTCAGATTCATTTTGTGAAGACTATCTACAAAACCAGATGCAGCTCTTGAATTTGGAAACTCAGGTAGAGACTATAAATTCAGTTGGTTCTGATTTTTCAAGTGATTATCATTACACAGAACCGGCATTGGGTTTAAGAACCAGTGGAATGTCACCAAACTTGCCTGAATTCCCTAACAAGGTTTGTCATTACTTCAATAAAGGGTATTGCAAGCATGGACATAACTGCAAGTACTTGCATGGTCATTCTATGCCAGAAAGCTTTCCTCCCATCCTCAGCCCAAATTTAAATGAAGTTTTAAATGAAGAACAAGTATTCTCTCCAGGGTCACTGGGAAAACTTGAAATGGAGTTAACTGAACTTTTGAAGTCTAGAAGAGGATTCCCAATTTCAATAGCCTCATTGCCAATGTTGTATTATGAAAAGTTTGGGAAGACTCTTCAGGCTGAGGGTTATCTTACAGAAAGCCAGAGACACGGTAAGGTTGGGTATAGTCTGACAAAGCTTCTTGCACGGATGAAGAATAGTATTTGTCTAATTGACAGGCCTCATGGACAGCATTCAGTTGTCTTGGCAGAAGATGTTCCAAAGTATTTGGAGTATTGCAGTGAGAGAGGTGATCCTGGTGGGATAGTTGCTAGTTCTCATCAGATTTATCTTACATTTCCAGCTGATAGCACTTTTCTTGAGCAAGATGTATCAAATTACTTCAACAAGTTTGGTCCAGTTCAAGATGTTAGGATTCCATGCCAATATAAGAGGATGTTCGGATTTGTGACTTTTGTGTACCCAGAGACAGTTAGGCAAATTTTGGCGATAGGAAATCCTCATTTTATATCGGGAGCTCGTGTTCTAGTTAAACCTTACAAGGAAAAGTCAAGGCTTGTTGATAGGAAGCTTCAAGAGAAAATTAAGCATGCCATGTCTTACAGGCCACCGTTTGTAGATGGAGATTCTGAGCATCATTTAGTGCCTCAAGCTTGTGATCAGTCAAGAATACTTGGGAAGGTGCTCATGGAGGAGTACGGGCACGCATTTGAACGCGAGGGAAAGCGAATCTCCCCCAAATCGATATCCAATCATCCTTACTTTGGATTATCATTGGATGAGTTGATGCTTTCAGAAGCCCAAGAAGAACAAATGGAGCTCCCAACTGCTGAACAATGTGACTACTTGTTGACTGTTTTGAACAATGGATCAAGCAGTGATGTTAATATCAGGCATATAAAGACCAACTAAAATGACCAAGTTAGGGAATGGCATGTCAACAGTAATATAGAGACTCAGACACAGACATAGGAGTCATAGGACTAGACAATCAAATTCAAGACTAATCCAAGGTTCATACAACAGGAATTTACTTTTCCCTTTTTTGTTTCCTTGACTTGGTGTGACTCTCTCAGCTAGACTTTAAGTAGTTGTTAATCAATGCCATCTGATGCAGACAGAGACTAGGAGTTCCTCCATAGAATTACATAGAGAAAAGATACAGCAGACAAATACATAACAGGTTTTAAAGTACTTTTTGGTCTTTCTATTTCAATGTAAC 1954 0.3976 MDFSNSTRIVYDRIQKLEPENVSKIIGYLLLESHGDHDMIRLAFCSDNMIQSEINKAKINLGLSKPVVSASISPFQVDHPTVLDLPQQLTPFSPVSSHCILSPSSVARSGNKYWDPQVPASQQLVHNVDFVSPAYSDSFCEDYLQNQMQLLNLETQVETINSVGSDFSSDYHYTEPALGLRTSGMSPNLPEFPNKVCHYFNKGYCKHGHNCKYLHGHSMPESFPPILSPNLNEVLNEEQVFSPGSLGKLEMELTELLKSRRGFPISIASLPMLYYEKFGKTLQAEGYLTESQRHGKVGYSLTKLLARMKNSICLIDRPHGQHSVVLAEDVPKYLEYCSERGDPGGIVASSHQIYLTFPADSTFLEQDVSNYFNKFGPVQDVRIPCQYKRMFGFVTFVYPETVRQILAIGNPHFISGARVLVKPYKEKSRLVDRKLQEKIKHAMSYRPPFVDGDSEHHLVPQACDQSRILGKVLMEEYGHAFEREGKRISPKSISNHPYFGLSLDELMLSEAQEEQMELPTAEQCDYLLTVLNNGSSSDVNIRHIKTN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01789 547 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 351 426 IPR000504 GO:0003723
Bach12g01789 547 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 365 407 IPR000504 GO:0003723
Bach12g01789 547 ProSiteProfiles Zinc finger C3H1-type profile. 191 218 IPR000571 GO:0046872
Bach12g01789 547 SMART rrm1_1 352 422 IPR000504 GO:0003723
Bach12g01789 547 SUPERFAMILY CCCH zinc finger 193 216 IPR036855 GO:0046872
Bach12g01789 547 Pfam OST-HTH/LOTUS domain 245 324 IPR025605 -
Bach12g01789 547 Gene3D - 190 279 - -
Bach12g01789 547 ProSiteProfiles OST-type HTH domain profile. 245 329 IPR025605 -
Bach12g01789 547 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) 1 539 - -
Bach12g01789 547 CDD RRM_AtC3H46_like 353 422 IPR034365 -
Bach12g01789 547 SUPERFAMILY RNA-binding domain, RBD 365 445 IPR035979 GO:0003676
Bach12g01789 547 FunFam zinc finger CCCH domain-containing protein 53-like isoform X2 358 429 - -
Bach12g01789 547 Gene3D - 357 429 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01789 Bach-Chr12 14199699 14203028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01789 - - qsa:O6P43_014477 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01789 12 14199699 14203028 Bach3g00922 3 19839249 19841985 BWGD
Bach12g01789 12 14199699 14203028 Bach12g01789 12 14199699 14203028 ECH