Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04132 ATGGTGAATGGAGTTACAGAATTGAGTGGACAAATTTGCCAGATCTGTGGGGATGAGATTGAGATTACTGTGGATGGGGAACCCTTTGTTGCTTGCAATGAATGTGCATTTCCTGTGTGTAGGCCTTGCTATGAGTATGAAAGAAGAGAGGGTAACCAAGCTTGCCCTCAGTGCAAAACCAGATACAAACGAAGCAAGGGTAGTCCTAGAGTTGAAGGTGATGAAGAAGAGGATGGTATTGATGATTTGGAGAATGAGTTTGACATTGGAAGCAATATCAAGCATGATCCTTGTCACATTGCTGAGGCAATGCTTGCGGCTCGCTTTAACACTGCCCGGAATTCACAGTTGAATGCTTCTGGAATCACCACACCATCAGAGTTAGATGCAGCTTCTGTAGCTGCTGATATCCCTCTCCTGACTTATGGTCATGAGGATGTTGGGATTTCTGCTGAGAAGCATGCTCTCATTGTTCCTCCATTCATGCATCGTGGTAGACGGATTCATCCTATGCCTTTTCCTGATTCATCTATACCAGCTCAACCCCGACCGATGGATCCTAAAAAAGATTTAGCAGTTTATGGATATGGAAGTGTTGCATGGAAGGAACGGATGGAGGAGTGGAAGAAAAAACAGAATGAAAAAATTGAGGTGGTTCAGCACGAAATGGTTGATGATGATGGTGGGAAAAATGGTGATGAGTTTGATCATCCAGATTTGCCTAAAATGGATGAAGGTAGACAGCCACTCTGGAGGAAGTTGCCAATTAGTCCAAGCAAGATAAATCCATATCGAATTATCATAATACTCCGAATCGCTGTTCTAGGCCTATTTTTTCATTACAGAATTCTCCATCCTGTCAATGATGCATATGCATTATGGATGACATCAGTAATATGTGAAATCTGGTTTGCTGTGTCATGGATTTTGGATCAGTTTCCAAAATGGTGCCCAATCGAGCGCGAAACATACCTTGACCGTTTATCACTTAGATATGAGAAAGAAGGAAAGCCATCCGAATTAGCTGATATAGATGTATTTGTCAGTACAGTGGATCCAATGAAAGAGCCTCCACTTATCACTGCAAACACTGTTCTGTCCATTCTTGCTGTGGATTATCCGGTCGATAAAGTTGCATGCTATGTCTCAGATGATGGTGCAGCTATGCTTACATTTGAAGCACTTTCAGAGACATCTGAATTTGCAAGGAAGTGGGTTCCATTCTGCAAGAAGTATAGCATTGAACCACGGGCTCCTGAATGGTATTTTGCTCAGAAGGTTGACTATCTAAAAGACAAAGTGGATGCAACCTTTGTCAAGGAGCGTCGCGCTATTAAGAGAGAGTATGAAGAATTCAAAGTGCGGATTAATGCATTGGTTGCAATGGCACAGAAGGTGCCAGAGGATGGCTGGACAATGCAAGATGGAACTCCGTGGCCCGGAAACAATGTCAGAGATCATCCTGGGATGATACAGGTTTTCCTAGGCCAAAATGGTGTTCGTGATATCGAAGGAAACGAGTTACCTCAACTAGTTTACGTGTCTCGTGAGAAAAGACCTGGATTTGAACACCACAAAAAAGCTGGTGCTATGAATGCCTTGATACGAGTTTCAGCTGTCATATCAAATGCTCCCTACCTACTGAATGTTGATTGTGATCACTACATAAACAATAGTAAGGCACTTCGTGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGAAAAAGATATGCTATGTACAATTTCCTCAAAGATTTGATGGGATCGATCGTCATGATAGATACTCGAATCGCAATGTTGTGTTCTTTGATATCAACATGAAAGGTTTGGATGGCATCCAAGGACCAATATATGTTGGAACTGGATGTGTCTTCCGGCGGCAGGCGCTTTATGGATACGATGCCCCTGTTAAGAAGAAACCGCCAATGAAGACTTGTAACTGTTGGCCTAGATGGTGCTGCTTGTGCTGTGGATCTAGGAAGAAGAATAGGAAAGTGAAATCAAGTGCTAAAAAGAAGATAAAGAGTAAGGATGGTACAAAGCAAATACATGCACTAGAAAACATTGAAGAGGGAATTGAAGGTATAGATAGTGAAAAGTCATCACTGATGTCACAACTAAAATTTGAGAAGAAGTTTGGTCAATCACCTGTTTTCATAGCTTCAACACTTATGGAAGATGGAGGTGTTCTAAAAGGAGCAAGTTCTACATCACTCTTGAAAGAAGCCATCCATGTGATTAGTTGTGGTTATGAAGATAAGACTGAGTGGGGAAAAGAGGTTGGATGGATATATGGCTCTGTTACAGAGGATATTCTAACAGGTTTCAAGATGCATTGTCATGGTTGGAGATCTGTGTACTGCATGCCAAAAAGGCCTGCTTTTAAGGGCTCGGCTCCTATAAATCTCTCGGACCGTCTGCACCAGGTTCTCCGGTGGGCTCTTGGTTCTGTTGAGATCATGTTGAGTAGGCACTGTCCTATATGGTATGGATATGGTTGCGGCTTGAAATGGCTGGAGCGTTTTTCTTACATTAACTCTGTCGTCTACCCTTTGACTTCGATTCCCTTAATTGCCTATTGCACCTTGCCAGCAGTCTGTCTCCTCACTGGGAAGTTCATAGTCCCTGAGATTAGCAACTATGCTAGTATCATTTTCATGTCCCTCTTCATCTCTATAGCTGCAACCGGCATCCTTGAAATGCAATGGGGAGGTGTTGGAATACATGATTGGTGGAGGAATGAACAATTTTGGGTCATTGGTGGTGCATCCTCGCACCTCTTCGCTCTCTTTCAAGGTCTGCTAAAGGTTCTGGCTGGAGTTAACACAAACTTCACAGTCACATCCAAAGCTGCGGACGACGGAGAATTCGCCGAACTTTACATCTTCAAGTGGACATCATTGTTGATCCCTCCTTTGACCTTGCTCATCATAAACATAATAGGAGTCATTGTAGGTGTCTCAGATGCAATAAACAATGGATACGATTCATGGGGTCCCCTTTTTGGTAAACTATTTTTTGCTCTATGGGTCATTCTCCATCTCTATCCATTCCTCAAGGGAGTTATGGGAAAACATGAAGGTGTTCCTACCATCATTCTGGTATGGGCTATTCTTCTTGCTTCAATCTTCTCACTACTTTGGGTAAGGATCAACCCATTTTTGTCAAAAAGTGACATTGTATTGGAACTTTGTGGGTTGAATTGTGATGATTAA 3219 0.4259 MVNGVTELSGQICQICGDEIEITVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRSKGSPRVEGDEEEDGIDDLENEFDIGSNIKHDPCHIAEAMLAARFNTARNSQLNASGITTPSELDAASVAADIPLLTYGHEDVGISAEKHALIVPPFMHRGRRIHPMPFPDSSIPAQPRPMDPKKDLAVYGYGSVAWKERMEEWKKKQNEKIEVVQHEMVDDDGGKNGDEFDHPDLPKMDEGRQPLWRKLPISPSKINPYRIIIILRIAVLGLFFHYRILHPVNDAYALWMTSVICEIWFAVSWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELADIDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKVDYLKDKVDATFVKERRAIKREYEEFKVRINALVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNELPQLVYVSREKRPGFEHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKPPMKTCNCWPRWCCLCCGSRKKNRKVKSSAKKKIKSKDGTKQIHALENIEEGIEGIDSEKSSLMSQLKFEKKFGQSPVFIASTLMEDGGVLKGASSTSLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIMLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGKFIVPEISNYASIIFMSLFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFAELYIFKWTSLLIPPLTLLIINIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVILHLYPFLKGVMGKHEGVPTIILVWAILLASIFSLLWVRINPFLSKSDIVLELCGLNCDD 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04132 1072 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 86 IPR013083 -
Arst9g04132 1072 ProSiteProfiles Zinc finger RING-type profile. 13 59 IPR001841 -
Arst9g04132 1072 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 248 1036 - -
Arst9g04132 1072 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 248 1036 - -
Arst9g04132 1072 SUPERFAMILY RING/U-box 4 81 - -
Arst9g04132 1072 CDD mRING-HC-C4C4_CesA 11 61 - -
Arst9g04132 1072 FunFam Cellulose synthase 1 86 - -
Arst9g04132 1072 Pfam Cellulose synthase 344 1060 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst9g04132 1072 Pfam Zinc-binding RING-finger 6 79 IPR027934 -
Arst9g04132 1072 SUPERFAMILY Nucleotide-diphospho-sugar transferases 357 871 IPR029044 -
Arst9g04132 1072 Pfam Cellulose synthase 344 1060 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst9g04132 1072 FunFam Cellulose synthase 461 635 - -
Arst9g04132 1072 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 490 636 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04132 Arst-Chr9 116438746 116444047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04132 2 1070 Glycosyltransferase AT5G64740 78.305 0.0 1721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04132 K10999 - gmx:100795809 1895.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04504 5 106348817 106355462 Arst9g04132 9 116438746 116444047 PCT