Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g04504 ATGGATACCAAGGGAAGACTCATTGCAGGGTCTCATAACAGGAATGAGTTTGTTCTTATCAATGCTGATGACACTGCAAGAGTGAATGCTGTTACAGAATTGAGTGGACAAATATGCCAGATCTGTGGTGATGAAGTAGAGGTCACAATTAATGGTGATCCATTTGTTGCTTGCAATGAGTGTGCATTCCCTGTTTGCAAGCCTTGCTATGAGTATGAAAGAAGAGAAGGGAACCAAGTTTGCCCTCAATGCAAAACAAGATACAACCGCATCAAAGGTTGTCCTAGAGTTGAGGGTGATGAAGAAGAGGATGGTGTTGATGATTTGGAGAATGAGTTTGATATTGGCAGCCACCCTCATCATCATCACATTGCTGAGACAATGCTATCTTCTCGCCTTAATGGTGGATTAGGAATCAGTACCACACCTTCAGAGTTTGATGCAGCATCTGTGGCAGGTTCTGAGATCCCTCTACTAACTTATGGTCAAGAGGATGTTGGAATCTCTGCTGATAAACATGCCCTCATTATTCCCCCATTCATGCCTCGTGGAAAACGTGTTCATCCTATGCCTTTTCCTGATTCCTCTGTACCCGTTCAAGCAAGAGCTATGGATCCTAAGAAAGACTTGGCAGTTTATGGATATGGAAGTGTTGCATGGAAGGAAAGAATGGAGGACTGGAAGAAGAAGCAATGTGAAAAACTTCAAGTGGTTAAGCATGAAGGGTGTAAGGATCTTGATGAGTTTGATGACCCTGAGTTACCAAAAATGGATGAGGGGAGACAACCACTATGGAGAAAGTTGCCAATAAGTTCAAGCAGAATAAATCCATACAGAATAATCATAGTTCTCAGGATTGCAATTCTCTGCCTCTTCTTTCATTATAGAATTCTGCACCCTGTGAATGATGCATATGCATTGTGGCTCACATCAGTCATATGTGAAATCTGGTTTGCTGCTTCATGGATTCTTGATCAGTTCCCAAAATGGTGTCCAATTGAAAGAGAAACATACCTTGATCGTTTATCTCTAAGGTATGAGAAGGAAGGGAAGCCATCAGAATTAGCTTGTGTAGATGTATTTGTTAGTACTGTTGATCCTATGAAGGAGCCTCCACTTATCACTGCAAACACTGTTCTTTCAATCCTTGCTGTGGATTATCCAGTAGAGAAAGTTGCATGCTATGTCTCAGATGATGGTGCTGCCATGCTTACATTCGAAGCACTTTCAGAGACATCTGAGTTTGCAAGGAAGTGGGTTCCATTCTGCAAGAAGTTCAGCATTGAACCAAGAGCTCCTGAATGGTACTTTGCACAGAAGGTTGACTATCTCAAAGACAAAGTTGATGCAGCATTTATCAGAGAGCGTCGCGCTATTAAGAGGGAGTATGAAGAATTCAAGGTGAGGATTAATGCATTGGTTGCGACGGCACAGAAGGTTCCTGAGGATGGTTGGACAATGCAGGATGGGACTCTATGGCCTGGAAACAATGTTAGAGATCACCCTGGAATGATTCAGGTTTTCCTTGGTCAAAATGGTGTCCGCGACATTGAGGGAAACGAATTGCCTCGCCTTGTTTATGTGTCTCGTGAGAAAAGACCAGGATATGAGCACCACAAGAAAGCTGGAGCTATGAATGCTTTGGTGAGAGTTTCAGCAATTATCTCCAATGCTCCTTACCTGCTGAATGTTGATTGTGATCACTACATAAACAATAGTAAGGCCCTTCGTGAAGCCATGTGCTTCATGATGGATCCTACATCAGGGAAGAAAATTTGCTATGTACAATTTCCTCAAAGATTTGATGGGATCGATCGTCACGATAGATACTCAAATCGCAATGTTGTGTTCTTTGATATCAATATGAAAGGTTTAGATGGAATCCAAGGACCAATATATGTGGGAACTGGGTGCGTCTTCAGGAGGCATGCACTTTATGGATATGATGCCCCCTCTTCCAAGAAACCACCACGGAGGACGTGTAACTGTTGGCCTAAATGGTGTTGCTGCCTCTGTTGTGGATCTCAGAAGAAGAAGAACAAAGGGAAGTCAAGTATGAAAATGTTAAAGAATAAGGATGATACAAAGCACATGCATACACTAGAAAACATAGAAGAGGGAATTGAAGGAGTTGAGAGTGAGAAGTCACTATTGATGTCTCAACTGAAATTTGAGAAAAAATTTGGGCAATCTGCTGTGTTCATAGCTGCGACACTTATGGAAGATGGAGGCCTTCCAAAAGCAGCAAGTTCTGCTACACTCTTGAAAGAAGCCATTCATGTAATTAGTTGTGGTTATGAAGATAAGACAGAATGGGGTAAAGAGGTTGGGTGGATCTATGGCTCAGTTACAGAGGATATTCTAACAGGTTTCAAGATGCACTGTCATGGCTGGAGATCGGTTTATTGCATGCCGAAAAGACCAGCTTTTAAGGGTTCAGCCCCTATAAATCTTTCTGACCGTCTGCATCAAGTTCTCCGGTGGGCGCTTGGATCGGTTGAGATCCTGTTTAGTAGGCATTGTCCTCTATGGTATGGCTATGGTTGCGGCTTGAAGTGGCTAGAGCGGTTTTCTTACATAAACTCAGTTGTTTATCCTCTCACTTCAATTCCCTTGATTGCCTACTGTACTTTGCCTGCTGTGTGTCTTCTCACTGGGAAGTTCATAGTCCCTGAGATTAGCAACTATGCCAGCATAATTTTCATGGCACTCTTCATCTCTATAGCTGCAACTAGCATATTGGAAATGCAATGGGGAGGAGTTGGCATACATGACTGGTGGAGGAATGAGCAGTTTTGGGTGATCGGTGGCGCCTCCTCGCACCTCTTTGCGCTCTTTCAAGGGTTGCTAAAGGTCCTAGCAGGAGTTAACACAAACTTCACTGTGACATCCAAAGCTGCAGATGATGGAGAGTTTGCTGAACTCTACATATTCAAGTGGACATCATTGTTGATTCCTCCATTGACATTGCTCATAATAAACATCATTGGAGTTATTGTTGGTGTCTCTGATGCCATAAACAATGGCTATGATTCTTGGGGTCCTCTCTTTGGGAAGCTGTTCTTTGCACTTTGGGTCATTGTCCATCTTTACCCCTTCCTCAAGGGTGTTATGGGAAAACAAGAAGGTGTTCCTACAATCATTTTGGTTTGGGCTATTCTCCTTGCTTCAATCTTGACACTTCTTTGGGTGAGGATCAACCCTTTTTTGGCCAAAAATGACATTGTTTTGGAACTTTGTGGATTGAAGTGTGATTGA 3258 0.4279 MDTKGRLIAGSHNRNEFVLINADDTARVNAVTELSGQICQICGDEVEVTINGDPFVACNECAFPVCKPCYEYERREGNQVCPQCKTRYNRIKGCPRVEGDEEEDGVDDLENEFDIGSHPHHHHIAETMLSSRLNGGLGISTTPSEFDAASVAGSEIPLLTYGQEDVGISADKHALIIPPFMPRGKRVHPMPFPDSSVPVQARAMDPKKDLAVYGYGSVAWKERMEDWKKKQCEKLQVVKHEGCKDLDEFDDPELPKMDEGRQPLWRKLPISSSRINPYRIIIVLRIAILCLFFHYRILHPVNDAYALWLTSVICEIWFAASWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELACVDVFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFAQKVDYLKDKVDAAFIRERRAIKREYEEFKVRINALVATAQKVPEDGWTMQDGTLWPGNNVRDHPGMIQVFLGQNGVRDIEGNELPRLVYVSREKRPGYEHHKKAGAMNALVRVSAIISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRHALYGYDAPSSKKPPRRTCNCWPKWCCCLCCGSQKKKNKGKSSMKMLKNKDDTKHMHTLENIEEGIEGVESEKSLLMSQLKFEKKFGQSAVFIAATLMEDGGLPKAASSATLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEILFSRHCPLWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGKFIVPEISNYASIIFMALFISIAATSILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFAELYIFKWTSLLIPPLTLLIINIIGVIVGVSDAINNGYDSWGPLFGKLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILLASILTLLWVRINPFLAKNDIVLELCGLKCD 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g04504 1085 FunFam Cellulose synthase 21 112 - -
Arst5g04504 1085 FunFam Cellulose synthase 475 649 - -
Arst5g04504 1085 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Arst5g04504 1085 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 506 653 IPR029044 -
Arst5g04504 1085 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 262 1046 - -
Arst5g04504 1085 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 262 1046 - -
Arst5g04504 1085 SUPERFAMILY Nucleotide-diphospho-sugar transferases 371 894 IPR029044 -
Arst5g04504 1085 Pfam Cellulose synthase 358 1074 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst5g04504 1085 Pfam Cellulose synthase 358 1074 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst5g04504 1085 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Arst5g04504 1085 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Arst5g04504 1085 CDD mRING-HC-C4C4_CesA 37 87 - -
Arst5g04504 1085 SUPERFAMILY RING/U-box 26 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g04504 Arst-Chr5 106348817 106355462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g04504 1 1084 Glycosyltransferase AT2G21770 77.747 0.0 1747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g04504 K10999 - gmx:100795809 1990.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04504 5 106348817 106355462 Arst5g04504 5 106348817 106355462 ECH
Arst5g04504 5 106348817 106355462 Arst9g04132 9 116438746 116444047 PCT