Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g04075 ATGGCTTCCAACAAGAGTAGTAGTACTCATCAACCATTAACATTGCTCCTCTTCTTCCTCCTCACCCTCTCCTCTGCACATGCCAAAGGTGGCATAGCCATCTACTGGGGCCAGAACAATGGCGACGGCAACTTAACCTCCACATGTGACACCGGAAACTACGAGATTGTGCTTCTCGCCTTTCTCTACACTTTCGGTTGTGGCAGAACTCCAGATTGGAACTTTGCTGGCCACTGTGGTTCATGGTCCCCTTGTGACAAACTACAACCAGAAATCGAACATTGCCAAAGAAACGGTGTGAAGGTGTTCCTCTCCCTTGGAGGAGCCGTTGGGCCCTACTCCTTATGCTCGCCGGAAGATGCCAAGAGCGTCTCCGACTACCTTTACAACAACTTCCTCACTGGCCAAAAGGGTCCATTAGGGAGTGTGTACCTTGATGGCATTGATTTCGACATTGAAGGTGGTTCAAACCTTTATTGGGATGACTTAGCTAGAGAACTCGATACACGCAGAAAGCAAGACAGGTACTTTTACTTGTCGGCAGCACCACAATGTTTCTTCACAGATTACTACCTTGATACCGCCATTAGAACTTGGCTTTTCGATTACCTCTTCGTCCAGTTCTACAACAACCCTCCATGCCAATATAGTAACGGCGACGCGTCTCTGCTCTTATCTTCTTGGAATACATGGACCTCCTATGTGAAGATCAACAACACGGTGTTTATGGGGCTACCCGCTGCACCTGATGCAGCTCCCAGCGGTGGCTATATTTCACCGCAAGATCTGTGTACTAAGGTTCTTCCAACCATCAAGCACACTCCTAACTATGGAGGCGTCATGCTATGGGATAGGTTCCGCGATGTTACTAACCACTACAGCGATCAAATCAAGGATTGTGTTATAGTTGATGATAGTGTTAGGGTGTCACAGACTGTGATGGCAACGTTATCAAACACTGTATCTCAATGTGTATCTGCAGCTTTCAACCGCATCATACCAAAACTAAGACCCTTTTAG 1020 0.4725 MASNKSSSTHQPLTLLLFFLLTLSSAHAKGGIAIYWGQNNGDGNLTSTCDTGNYEIVLLAFLYTFGCGRTPDWNFAGHCGSWSPCDKLQPEIEHCQRNGVKVFLSLGGAVGPYSLCSPEDAKSVSDYLYNNFLTGQKGPLGSVYLDGIDFDIEGGSNLYWDDLARELDTRRKQDRYFYLSAAPQCFFTDYYLDTAIRTWLFDYLFVQFYNNPPCQYSNGDASLLLSSWNTWTSYVKINNTVFMGLPAAPDAAPSGGYISPQDLCTKVLPTIKHTPNYGGVMLWDRFRDVTNHYSDQIKDCVIVDDSVRVSQTVMATLSNTVSQCVSAAFNRIIPKLRPF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g04075 339 FunFam Acidic endochitinase SE2 30 301 - -
Arst9g04075 339 Gene3D Glycosidases 27 315 - -
Arst9g04075 339 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 300 IPR001223 GO:0005975
Arst9g04075 339 CDD GH18_hevamine_XipI_class_III 30 299 IPR045321 -
Arst9g04075 339 Pfam Glycosyl hydrolases family 18 32 288 IPR001223 GO:0005975
Arst9g04075 339 PANTHER ENDOCHITINASE 17 298 - -
Arst9g04075 339 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Arst9g04075 339 SUPERFAMILY (Trans)glycosidases 29 297 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g04075 Arst-Chr9 115868687 115870050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g04075 16 297 Glycoside Hydrolase AT5G24090 51.042 1.39e-96 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g04075 K01183 - gmx:547449 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g04075 9 115868687 115870050 Arst9g04075 9 115868687 115870050 ECH
Arst5g04444 5 105741703 105742719 Arst9g04075 9 115868687 115870050 PCT